DY305579

Overview
NameDY305579
Unique NameDY305579
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1234
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: G2OX_PHACN (Gibberellin 2-beta-dioxygenase OS=Phaseolus coccineus GN=GA2OX1 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 3.529e-15
Identity = 49/181 (27.07%), Postives = 92/181 (50.83%), Query Frame = -1
Query:  257 PVGFSEISLEYCKRIRQVARELLKGISESLGL-EFCYIERAMNLDSGLQILIANLYPPCPQPELA----MGMPPHSDHGLLTLLTQNGICGLQL-LHNGKWVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPSKELIERQSEAPAYIGIKYKDF 781
            P  F  +   Y   ++ +   +L+ ++E LG+ +   + R +  +        N YPPCP+ +      +G   H+D  ++++L  N   GLQ+ L +G WV+V     SF +N GD +++++NG++KSV HR + +   +R+S+    GP+L   + P   ++ +  E        YK+F
Sbjct:  130 PHHFRAVVENYITAVKNMCYAVLELMAEGLGIRQRNTLSRLLKDEKSDSCFRLNHYPPCPEVQALNRNLVGFGEHTDPQIISVLRSNSTSGLQICLTDGTWVSVPPDQTSFFINVGDALQVMTNGRFKSVKHRVLADTTKSRLSMIYFGGPALSENIAPLPSVMLKGEEC------LYKEF 304          
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: G2OX7_ARATH (Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 7.861e-15
Identity = 46/142 (32.39%), Postives = 77/142 (54.23%), Query Frame = -1
Query:  326 YCKRIRQVARELLKGISESLGLEFCYIERAMNLDSGLQILIANLYPPCPQPELAMGMPPHSDHGLLTLLTQNGICGLQLLHNGKWVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVE 751
            Y + I +VA+ + + + + + +   Y E    L++    L  N Y P        G+ PH+D   LT+L+Q+ I GL+L +NG+W++V     +  VN GD  + LSNG Y+SV HR +    + R+S+A    P L+T ++
Sbjct:  159 YVQEIARVAQMICEILGKQVNVSSEYFENIFELENSF--LRLNKYHPSVFGSEVFGLVPHTDTSFLTILSQDQIGGLELENNGQWISVKPCLEALTVNIGDMFQALSNGVYQSVRHRVISPANIERMSIAFFVCPYLETEID 298          
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: G2OX1_PEA (Gibberellin 2-beta-dioxygenase 1 OS=Pisum sativum GN=GA2OX1 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.987e-14
Identity = 50/177 (28.25%), Postives = 92/177 (51.98%), Query Frame = -1
Query:  263 FSEISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSGLQILI-ANLYPPCPQ----PELAMGMPPHSDHGLLTLLTQNGICGLQL-LHNGKWVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPSKELIE-RQSEAPAYIGIKYK 772
            F  +  +Y   +R +A E+L  ++E L ++   +   + +D     L   N YP CP+     E  +G   H+D  ++++L  N   G Q+ L +G W++V    +SF +N GD +++++NG++KSV HR + N    R+S+    GP L   + P   L++ ++S    +   +YK
Sbjct:  129 FRGLLKDYKCAMRNMACEILDLMAEGLKIQPKNVFSKLVMDKQSDCLFRVNHYPACPELAINGENLIGFGEHTDPQIISILRSNNTSGFQISLRDGSWISVPPDHSSFFINVGDSLQVMTNGRFKSVRHRVLANGIDPRLSMIYFCGPPLSEKIAPLPSLMKGKESLYKEFTWFEYK 305          
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: G2OX2_PEA (Gibberellin 2-beta-dioxygenase 2 OS=Pisum sativum GN=GA2OX2 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.135e-13
Identity = 49/178 (27.53%), Postives = 88/178 (49.44%), Query Frame = -1
Query:  296 PVGFSEISLEYCKRIRQVARELLKGISESLGL-EFCYIERAMNLDSGLQILIANLYPPCPQ--------------PELAMGMPPHSDHGLLTLLTQNGICGLQL-LHNGKWVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPSKELIERQS 781
            P+ FS I  +Y K ++ +  E+L+  +E L + +   + + +  +    +L  N YPP  +                  +G   HSD  +LT+L  N + GLQ+  H+G W+ V   P+ F V  GD +++L+NG++ SV HR + N    R+S+     P L+ ++ P  +++   S
Sbjct:  125 PIKFSCIVNDYIKAVKDLTCEILELAAEGLWVPDKSSLSKIIKDEHSDSLLRINHYPPVKKLGNDNWDPSKIQNSNNNNIGFGEHSDPQILTILRSNNVGGLQISTHHGLWIPVPPDPSEFYVMVGDALQVLTNGRFVSVRHRVLTNTTKPRMSMMYFAAPPLNWLISPLSKMVTAHS 302          
The following BLAST results are available for this feature:
BLAST of DY305579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
G2OX_PHACN3.529e-1527.07Gibberellin 2-beta-dioxygenase OS=Phaseolus coccin... [more]
G2OX7_ARATH7.861e-1532.39Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis th... [more]
G2OX1_PEA2.987e-1428.25Gibberellin 2-beta-dioxygenase 1 OS=Pisum sativum ... [more]
G2OX2_PEA1.135e-1327.53Gibberellin 2-beta-dioxygenase 2 OS=Pisum sativum ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1CA11RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305579 ID=DY305579; Name=DY305579; organism=Citrus sinensis; type=EST; length=1234bp
GCACACCAATATTTATTAGTTAATTTATTAATTAATTTTTAAAAAAAAAT
TAATTAATGTCAAAAATATTGTTTGAGATATATTTTAAAATATAAAAACC
AAACATACACTTAAATTAAAATATAATATAAAACTAAATTTAAATTTAAA
GCTTCAATGCCCTCACAAATCCACTCATGTATAGGCTATAAATTCAAACC
CTCACACGGTCCAAAACAGATTTATTATCAAGCTGGTTGCTTTGCTGAAG
TTCCAAAAAGTCCTTGTATTTTATTCCAATGTATGCCGGAGCTTCACTTT
GACGTTCTATCAACTCTTTCGATGGTTCAACGACCGTATCAAGAGATGGT
CCGTTCGCAATGGCTAACGATACCCTTGTCATCTTGTTGTTCACGACAGC
TCTATGCACAACACTCTTGTACTTGCCATTACTCAGAATCTCAATGTGAT
CACCAGTGTTAACAAGAAATGAGTTAGGGACAGCATTGACATTGACCCAC
TTTCCATTGTGTAGCAACTGAAGACCACAAATCCCATTCTGTGTGAGGAG
AGTCAATAGGCCATGATCAGAATGAGGAGGCATTCCCATTGCAAGCTCAG
GCTGTGGACACGGTGGGTACAAATTTGCAATCAGGATTTGCAAACCTGAA
TCTAGATTCATGGCCCTCTCGATGTAGCAGAATTCCAATCCCAAACTCTC
TGATATCCCTTTAAGCAACTCCCTTGCAACTTGTCGAATTCTTTTGCAAT
ATTCTAGTGAAATCTCACTGAATCCAACTGGCTTGTTTGGTGAATGGAAC
TCAAGATGAACGAGGACTTTGATAAAATCCCCTCCAAAAAAAACCTTCTC
AACCCAAGCATTTAAACTAATACCACATCTTAATGGGGTCAAAAACATGC
TTTCCCGCAAACTCTCTCTTCCTCTCCCTCCCTAAGGTTTAAAAATCTTT
TGACAAGAAACCCTCGTCCTTTCCCCTAAATTTCCCCGGGCAATTTAAGA
TTTATTATCCGGAAAAAAACCCCCATCTCCCTGCAGGCCTTTACCCAAAA
ATCCGGGAAAAAATTTGGAACCCTTAAAATGGGGGCGTGGAAAAAAATTT
AAAAAAAAAAAAAAAACCAAAAAACCGGGAAATCAAAAACTTTCTCGGGG
GGCAATATTTCCTTAAAAACCCTCCTTCTCTAATACCGTGTTTTTTTTTT
TTTTGTGGGGGGAAATGTGTTTTTTTTTTTGGTG
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