DY305577

Overview
NameDY305577
Unique NameDY305577
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305577 vs. ExPASy Swiss-Prot
Match: KS6A5_HUMAN (Ribosomal protein S6 kinase alpha-5 OS=Homo sapiens GN=RPS6KA5 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.465e-11
Identity = 45/136 (33.09%), Postives = 71/136 (52.21%), Query Frame = 1
Query:    4 DWWALGVLIYFMLQGEMPF--GSWRESEIDIVAKIAKGQLSLPQNLSHEAVDLLTKLLVVDENTRLGSQGP---TSVKTHPWFRDVDWKGIAESTSPVPHEIMSR----ISQHLDSHFEDSPVFQ-ASPPRDVEEL 381
            DWW+LGVL+Y +L G  PF     + S+ +I  +I K +   PQ +S  A DL+ +LL+ D   RLG  GP     +K H +F+ ++W  +A    P P + + R    +S   +   E  P +  A+ P+  E+L
Sbjct:  237 DWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGC-GPRDADEIKEHLFFQKINWDDLAAKKVPAPFKPVIRDELDVSNFAEEFTEMDPTYSPAALPQSSEKL 371          
BLAST of DY305577 vs. ExPASy Swiss-Prot
Match: ST38L_MOUSE (Serine/threonine-protein kinase 38-like OS=Mus musculus GN=Stk38l PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.219e-11
Identity = 44/134 (32.84%), Postives = 63/134 (47.01%), Query Frame = 1
Query:    4 DWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNL--SHEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSRISQHLDSHFEDSPVFQASPPRDVEELNVPEWL 399
            DWW+LGV++Y ML G  PF S    E        K  L+ P  +  S +A DL+ +     EN R+G+ G   +K HP+F  VDW  I E  + +P EI S         F +S + Q  P     +    +W+
Sbjct:  305 DWWSLGVIMYEMLIGFPPFCSETPQETYRKVMSWKETLAFPPEVPVSEKAKDLILRFCTDSEN-RIGNGGVEEIKGHPFFEGVDWGHIRERPAAIPIEIRSIDDTSNFDDFPESDILQPVPNTTEPDYKSKDWV 437          
BLAST of DY305577 vs. ExPASy Swiss-Prot
Match: KS6A5_MOUSE (Ribosomal protein S6 kinase alpha-5 OS=Mus musculus GN=Rps6ka5 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.219e-11
Identity = 46/136 (33.82%), Postives = 68/136 (50.00%), Query Frame = 1
Query:    4 DWWALGVLIYFMLQGEMPF--GSWRESEIDIVAKIAKGQLSLPQNLSHEAVDLLTKLLVVDENTRLGSQGP---TSVKTHPWFRDVDWKGIAESTSPVPHEIMSR----ISQHLDSHFEDSPVFQ-ASPPRDVEEL 381
            DWW+LGVL+Y +L G  PF     + S+ +I  +I K +   PQ +S  A DLL +LL+ D   RLG  GP     +K H +F  + W  +A    P P + + R    +S   +   E  P +  A+ P+  E L
Sbjct:  236 DWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSTVAKDLLQRLLMKDPKKRLGC-GPRDAEEIKEHLFFEKIKWDDLAAKKVPAPFKPVIRDELDVSNFAEEFTEMDPTYSPAALPQSSERL 370          
BLAST of DY305577 vs. ExPASy Swiss-Prot
Match: KS6A4_HUMAN (Ribosomal protein S6 kinase alpha-4 OS=Homo sapiens GN=RPS6KA4 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.219e-11
Identity = 42/128 (32.81%), Postives = 64/128 (50.00%), Query Frame = 1
Query:    4 DWWALGVLIYFMLQGEMPFG--SWRESEIDIVAKIAKGQLSLPQNLSHEAVDLLTKLLVVDENTRLGS--QGPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSRISQHLDSHFED----SPVFQASPP 363
            DWW+LG+L++ +L G  PF     R ++ ++  +I K     P  +   A DLL +LL  D   RLG+  QG   V+ HP+F+ +DW  +A    P P     R    + +  E+     PV+  SPP
Sbjct:  220 DWWSLGILLFELLTGASPFTLEGERNTQAEVSRRILKCSPPFPPRIGPVAQDLLQRLLCKDPKKRLGAGPQGAQEVRNHPFFQGLDWVALAARKIPAPFRPQIRSELDVGNFAEEFTRLEPVY--SPP 345          
BLAST of DY305577 vs. ExPASy Swiss-Prot
Match: KPCB_MOUSE (Protein kinase C beta type OS=Mus musculus GN=Prkcb PE=1 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 4.204e-11
Identity = 40/127 (31.50%), Postives = 64/127 (50.39%), Query Frame = 1
Query:    4 DWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSHEAVDLLTKLLVVDENTRL--GSQGPTSVKTHPWFRDVDWKGI--AESTSPVPHEIMSRISQHLDSHFEDSPVFQASPPRDV 372
            DWWA GVL+Y ML G+ PF    E E ++   I +  ++ P+++S EAV +   L+      RL  G +G   +K H +FR +DW+ +   E   P   +   R +++ D  F   P     P ++V
Sbjct:  523 DWWAFGVLLYEMLAGQAPFEG--EDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPKACGRNAENFDRFFTRHPPVLTPPDQEV 647          
BLAST of DY305577 vs. ExPASy Swiss-Prot
Match: KPCB_BOVIN (Protein kinase C beta type OS=Bos taurus GN=PRKCB PE=2 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 4.204e-11
Identity = 40/127 (31.50%), Postives = 64/127 (50.39%), Query Frame = 1
Query:    4 DWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSHEAVDLLTKLLVVDENTRL--GSQGPTSVKTHPWFRDVDWKGI--AESTSPVPHEIMSRISQHLDSHFEDSPVFQASPPRDV 372
            DWWA GVL+Y ML G+ PF    E E ++   I +  ++ P+++S EAV +   L+      RL  G +G   +K H +FR +DW+ +   E   P   +   R +++ D  F   P     P ++V
Sbjct:  523 DWWAFGVLLYEMLAGQAPFEG--EDEDELFQSIMEHNVAYPKSMSKEAVAICKGLITKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPKACGRNAENFDRFFTRHPPVLTPPDQEV 647          
BLAST of DY305577 vs. ExPASy Swiss-Prot
Match: KS6B1_RAT (Ribosomal protein S6 kinase beta-1 OS=Rattus norvegicus GN=Rps6kb1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.491e-11
Identity = 42/88 (47.73%), Postives = 56/88 (63.64%), Query Frame = 1
Query:    4 DWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKIAKGQLSLPQNLSHEAVDLLTKLLVVDENTRLGSQGP---TSVKTHPWFRDVDWK 255
            DWW+LG L+Y ML G  PF G  R+  ID   KI K +L+LP  L+ EA DLL KLL  +  +RLG+ GP     V+ HP+FR ++W+
Sbjct:  275 DWWSLGALMYDMLTGAPPFTGENRKKTID---KILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGA-GPGDAGEVQAHPFFRHINWE 358          
BLAST of DY305577 vs. ExPASy Swiss-Prot
Match: KS6B1_RABIT (Ribosomal protein S6 kinase beta-1 OS=Oryctolagus cuniculus GN=RPS6KB1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.491e-11
Identity = 42/88 (47.73%), Postives = 56/88 (63.64%), Query Frame = 1
Query:    4 DWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKIAKGQLSLPQNLSHEAVDLLTKLLVVDENTRLGSQGP---TSVKTHPWFRDVDWK 255
            DWW+LG L+Y ML G  PF G  R+  ID   KI K +L+LP  L+ EA DLL KLL  +  +RLG+ GP     V+ HP+FR ++W+
Sbjct:  275 DWWSLGALMYDMLTGAPPFTGENRKKTID---KILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGA-GPGDAGEVQAHPFFRHINWE 358          
BLAST of DY305577 vs. ExPASy Swiss-Prot
Match: KS6B1_MOUSE (Ribosomal protein S6 kinase beta-1 OS=Mus musculus GN=Rps6kb1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.491e-11
Identity = 42/88 (47.73%), Postives = 56/88 (63.64%), Query Frame = 1
Query:    4 DWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKIAKGQLSLPQNLSHEAVDLLTKLLVVDENTRLGSQGP---TSVKTHPWFRDVDWK 255
            DWW+LG L+Y ML G  PF G  R+  ID   KI K +L+LP  L+ EA DLL KLL  +  +RLG+ GP     V+ HP+FR ++W+
Sbjct:  275 DWWSLGALMYDMLTGAPPFTGENRKKTID---KILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGA-GPGDAGEVQAHPFFRHINWE 358          
BLAST of DY305577 vs. ExPASy Swiss-Prot
Match: KS6B1_HUMAN (Ribosomal protein S6 kinase beta-1 OS=Homo sapiens GN=RPS6KB1 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.491e-11
Identity = 42/88 (47.73%), Postives = 56/88 (63.64%), Query Frame = 1
Query:    4 DWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKIAKGQLSLPQNLSHEAVDLLTKLLVVDENTRLGSQGP---TSVKTHPWFRDVDWK 255
            DWW+LG L+Y ML G  PF G  R+  ID   KI K +L+LP  L+ EA DLL KLL  +  +RLG+ GP     V+ HP+FR ++W+
Sbjct:  275 DWWSLGALMYDMLTGAPPFTGENRKKTID---KILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGA-GPGDAGEVQAHPFFRHINWE 358          
The following BLAST results are available for this feature:
BLAST of DY305577 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
KS6A5_HUMAN2.465e-1133.09Ribosomal protein S6 kinase alpha-5 OS=Homo sapien... [more]
ST38L_MOUSE3.219e-1132.84Serine/threonine-protein kinase 38-like OS=Mus mus... [more]
KS6A5_MOUSE3.219e-1133.82Ribosomal protein S6 kinase alpha-5 OS=Mus musculu... [more]
KS6A4_HUMAN3.219e-1132.81Ribosomal protein S6 kinase alpha-4 OS=Homo sapien... [more]
KPCB_MOUSE4.204e-1131.50Protein kinase C beta type OS=Mus musculus GN=Prkc... [more]
KPCB_BOVIN4.204e-1131.50Protein kinase C beta type OS=Bos taurus GN=PRKCB ... [more]
KS6B1_RAT5.491e-1147.73Ribosomal protein S6 kinase beta-1 OS=Rattus norve... [more]
KS6B1_RABIT5.491e-1147.73Ribosomal protein S6 kinase beta-1 OS=Oryctolagus ... [more]
KS6B1_MOUSE5.491e-1147.73Ribosomal protein S6 kinase beta-1 OS=Mus musculus... [more]
KS6B1_HUMAN5.491e-1147.73Ribosomal protein S6 kinase beta-1 OS=Homo sapiens... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1CA09RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305577 ID=DY305577; Name=DY305577; organism=Citrus sinensis; type=EST; length=878bp
GCTGACTGGTGGGCATTGGGAGTCCTAATTTATTTCATGTTACAAGGTGA
AATGCCATTTGGATCTTGGAGAGAGAGTGAAATAGATATTGTTGCAAAGA
TTGCAAAAGGGCAGCTAAGTCTTCCACAGAATTTAAGCCATGAAGCTGTT
GATCTCCTTACAAAGTTGCTCGTAGTTGATGAAAATACAAGACTTGGTAG
CCAAGGTCCCACTTCTGTCAAAACTCACCCATGGTTCAGAGATGTTGATT
GGAAAGGGATTGCTGAATCTACTTCTCCTGTTCCACATGAGATAATGTCT
CGCATAAGTCAACACCTGGATAGTCATTTTGAGGATTCTCCTGTTTTTCA
AGCTTCTCCGCCTCGAGATGTTGAAGAACTCAATGTTCCTGAATGGCTTG
ATGACTGGTAGGAGTATGATTGGTATCTTTAGTTTTGGTTCTGTTACGCT
ATTACGTCTTGCCCAGAAGTTCTTTCCTTGGTTTCTTCCCTGCCTGGCTC
TTGGCTTATTTGGAAGTTTGAAGAGCACACATTTCGAAGTAGAAGTAGGT
AAACAATAGAGAAAACAAAAATAGAATTGCAGGTTGCAGCCACGGCCTAC
ATTTGCTCATAATCCTATGATTTTGTTTTTGTGCCGTAGTTGATGATGCG
AAGGGGGTTGGTTACCTCTTTTGAGTAATTGTGCAGTTTCGTAATTAGCC
ATCTAACTAATTCATTGGAGAAGCCAAATTAGTAGTTTTTTTTTTTTTTC
AGTTTTTATATTTTTTAAGTGATGTAAATACGTAAATATGTAAATGAACC
AGGTTCCCTCATGTTTTAAATTTGTAATTCTAGCTTTCTACTTTTATTTT
CATTTTGATAATGTAAAAAGTTGGCAAG
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