DY305577

Overview
NameDY305577
Unique NameDY305577
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305577 vs. ExPASy Swiss-Prot
Match: KS6B1_BOVIN (Ribosomal protein S6 kinase beta-1 OS=Bos taurus GN=RPS6KB1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.491e-11
Identity = 42/88 (47.73%), Postives = 56/88 (63.64%), Query Frame = 1
Query:    4 DWWALGVLIYFMLQGEMPF-GSWRESEIDIVAKIAKGQLSLPQNLSHEAVDLLTKLLVVDENTRLGSQGP---TSVKTHPWFRDVDWK 255
            DWW+LG L+Y ML G  PF G  R+  ID   KI K +L+LP  L+ EA DLL KLL  +  +RLG+ GP     V+ HP+FR ++W+
Sbjct:  275 DWWSLGALMYDMLTGAPPFTGENRKKTID---KILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGA-GPGDAGEVQAHPFFRHINWE 358          
BLAST of DY305577 vs. ExPASy Swiss-Prot
Match: KS6A5_PONAB (Ribosomal protein S6 kinase alpha-5 OS=Pongo abelii GN=RPS6KA5 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.491e-11
Identity = 45/136 (33.09%), Postives = 70/136 (51.47%), Query Frame = 1
Query:    4 DWWALGVLIYFMLQGEMPF--GSWRESEIDIVAKIAKGQLSLPQNLSHEAVDLLTKLLVVDENTRLGSQGP---TSVKTHPWFRDVDWKGIAESTSPVPHEIMSR----ISQHLDSHFEDSPVFQ-ASPPRDVEEL 381
            DWW+LGVL+Y +L G  PF     + S+ +I  +I K +   PQ +S  A DL+  LL+ D   RLG  GP     +K H +F+ ++W  +A    P P + + R    +S   +   E  P +  A+ P+  E+L
Sbjct:  237 DWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQHLLMKDPKKRLGC-GPRDADEIKEHLFFQKINWDDLAAKKVPAPFKPVIRDELDVSNFAEEFTEMDPTYSPAALPQSSEKL 371          
BLAST of DY305577 vs. ExPASy Swiss-Prot
Match: KPCA_BOVIN (Protein kinase C alpha type OS=Bos taurus GN=PRKCA PE=1 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 5.491e-11
Identity = 43/135 (31.85%), Postives = 69/135 (51.11%), Query Frame = 1
Query:    4 DWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSHEAVDLLTKLLVVDENTRL--GSQGPTSVKTHPWFRDVDWKGI--AESTSPVPHEIMSRISQHLDSHF-EDSPVFQASPPRDVEELNVPE 393
            DWWA GVL+Y ML G+ PF    E E ++   I +  +S P++LS EAV +   L+      RL  G +G   V+ H +FR +DW+ +   E   P   ++  + +++ D  F    PV   +PP  +   N+ +
Sbjct:  520 DWWAYGVLLYEMLAGQPPFDG--EDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTKHPGKRLGCGPEGERDVREHAFFRRIDWEKLENREIQPPFKPKVCGKGAENFDKFFTRGQPVL--TPPDQLVIANIDQ 650          
BLAST of DY305577 vs. ExPASy Swiss-Prot
Match: KPCA_MOUSE (Protein kinase C alpha type OS=Mus musculus GN=Prkca PE=1 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 7.171e-11
Identity = 43/135 (31.85%), Postives = 69/135 (51.11%), Query Frame = 1
Query:    4 DWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSHEAVDLLTKLLVVDENTRL--GSQGPTSVKTHPWFRDVDWKGI--AESTSPVPHEIMSRISQHLDSHF-EDSPVFQASPPRDVEELNVPE 393
            DWWA GVL+Y ML G+ PF    E E ++   I +  +S P++LS EAV +   L+      RL  G +G   V+ H +FR +DW+ +   E   P   ++  + +++ D  F    PV   +PP  +   N+ +
Sbjct:  520 DWWAYGVLLYEMLAGQPPFDG--EDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTKQPAKRLGCGPEGERDVREHAFFRRIDWEKLENREIQPPFKPKVCGKGAENFDKFFTRGQPVL--TPPDQLVIANIDQ 650          
BLAST of DY305577 vs. ExPASy Swiss-Prot
Match: KAPCG_HUMAN (cAMP-dependent protein kinase catalytic subunit gamma OS=Homo sapiens GN=PRKACG PE=1 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 7.171e-11
Identity = 39/96 (40.62%), Postives = 46/96 (47.92%), Query Frame = 1
Query:    4 DWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSHEAVDLLTKLLVVDENTRLGS--QGPTSVKTHPWFRDVDWKGIAESTSPVP 285
            DWWALGVLIY M  G  PF  + +  I I  KI  G++  P  LS +   LL  LL VD   R G+   G   +K H WF    W  I E     P
Sbjct:  221 DWWALGVLIYEMAVGFPPF--YADQPIQIYEKIVSGRVRFPSKLSSDLKHLLRSLLQVDLTKRFGNLRNGVGDIKNHKWFATTSWIAIYEKKVEAP 314          
BLAST of DY305577 vs. ExPASy Swiss-Prot
Match: Y0701_DICDI (Probable serine/threonine-protein kinase DDB_G0272282 OS=Dictyostelium discoideum GN=DDB_G0272282 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.366e-11
Identity = 34/83 (40.96%), Postives = 46/83 (55.42%), Query Frame = 1
Query:    4 DWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSHEAVDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDW 252
            DWWALG+++Y  L G  PF       I         ++  P+ +S EA DL+ KLL  D   RLG+ G   VKTHP+F +V+W
Sbjct: 1774 DWWALGIILYEFLTGSPPFNDDTPELIFQHILHRDREMEWPEEISSEAKDLILKLLNPDPYKRLGANGAYEVKTHPFFANVNW 1856          
BLAST of DY305577 vs. ExPASy Swiss-Prot
Match: KS6AA_XENLA (Ribosomal protein S6 kinase 2 alpha OS=Xenopus laevis GN=rps6ka PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.366e-11
Identity = 41/125 (32.80%), Postives = 66/125 (52.80%), Query Frame = 1
Query:    1 ADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSHEAVDLLTKLLVVDENTRLGS--QGPTSVKTHPWFRDVDWKGIAESTSPVPHEIMSRISQHLDSHFEDSPVFQASPPRD 369
            ADWW+ GVL++ ML G +PF    +   + +  I K +L +PQ LS+EA  LL  L   +   RLGS  +G   +K  P+F  +DW  +       P +    ++Q  D+++ D+  F +  P+D
Sbjct:  243 ADWWSYGVLMFEMLTGSLPFQG--KDRKETMTLILKAKLGMPQFLSNEAQSLLRALFKRNPTNRLGSAMEGAEEIKRQPFFSTIDWNKLFRREMSPPFK--PAVTQADDTYYFDTE-FTSRTPKD 362          
BLAST of DY305577 vs. ExPASy Swiss-Prot
Match: KPCA_RAT (Protein kinase C alpha type OS=Rattus norvegicus GN=Prkca PE=1 SV=3)

HSP 1 Score: 67.781 bits (164), Expect = 9.366e-11
Identity = 43/135 (31.85%), Postives = 69/135 (51.11%), Query Frame = 1
Query:    4 DWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSHEAVDLLTKLLVVDENTRL--GSQGPTSVKTHPWFRDVDWKGI--AESTSPVPHEIMSRISQHLDSHF-EDSPVFQASPPRDVEELNVPE 393
            DWWA GVL+Y ML G+ PF    E E ++   I +  +S P++LS EAV +   L+      RL  G +G   V+ H +FR +DW+ +   E   P   ++  + +++ D  F    PV   +PP  +   N+ +
Sbjct:  520 DWWAYGVLLYEMLAGQPPFDG--EDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTKHPAKRLGCGPEGERDVREHAFFRRIDWEKLENREIQPPFKPKVCGKGAENFDKFFTRGQPVL--TPPDQLVIANIDQ 650          
BLAST of DY305577 vs. ExPASy Swiss-Prot
Match: KPCA_RABIT (Protein kinase C alpha type OS=Oryctolagus cuniculus GN=PRKCA PE=2 SV=3)

HSP 1 Score: 67.781 bits (164), Expect = 9.366e-11
Identity = 43/135 (31.85%), Postives = 69/135 (51.11%), Query Frame = 1
Query:    4 DWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSHEAVDLLTKLLVVDENTRL--GSQGPTSVKTHPWFRDVDWKGI--AESTSPVPHEIMSRISQHLDSHF-EDSPVFQASPPRDVEELNVPE 393
            DWWA GVL+Y ML G+ PF    E E ++   I +  +S P++LS EAV +   L+      RL  G +G   V+ H +FR +DW+ +   E   P   ++  + +++ D  F    PV   +PP  +   N+ +
Sbjct:  520 DWWAYGVLLYEMLAGQPPFDG--EDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTKHPAKRLGCGPEGERDVREHAFFRRIDWEKLENREIQPPFKPKVCGKGAENFDKFFTRGQPV--VTPPDQLVIANIDQ 650          
BLAST of DY305577 vs. ExPASy Swiss-Prot
Match: KPCA_HUMAN (Protein kinase C alpha type OS=Homo sapiens GN=PRKCA PE=1 SV=3)

HSP 1 Score: 67.781 bits (164), Expect = 9.366e-11
Identity = 43/135 (31.85%), Postives = 69/135 (51.11%), Query Frame = 1
Query:    4 DWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSHEAVDLLTKLLVVDENTRL--GSQGPTSVKTHPWFRDVDWKGI--AESTSPVPHEIMSRISQHLDSHF-EDSPVFQASPPRDVEELNVPE 393
            DWWA GVL+Y ML G+ PF    E E ++   I +  +S P++LS EAV +   L+      RL  G +G   V+ H +FR +DW+ +   E   P   ++  + +++ D  F    PV   +PP  +   N+ +
Sbjct:  520 DWWAYGVLLYEMLAGQPPFDG--EDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTKHPAKRLGCGPEGERDVREHAFFRRIDWEKLENREIQPPFKPKVCGKGAENFDKFFTRGQPVL--TPPDQLVIANIDQ 650          
The following BLAST results are available for this feature:
BLAST of DY305577 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
KS6B1_BOVIN5.491e-1147.73Ribosomal protein S6 kinase beta-1 OS=Bos taurus G... [more]
KS6A5_PONAB5.491e-1133.09Ribosomal protein S6 kinase alpha-5 OS=Pongo abeli... [more]
KPCA_BOVIN5.491e-1131.85Protein kinase C alpha type OS=Bos taurus GN=PRKCA... [more]
KPCA_MOUSE7.171e-1131.85Protein kinase C alpha type OS=Mus musculus GN=Prk... [more]
KAPCG_HUMAN7.171e-1140.63cAMP-dependent protein kinase catalytic subunit ga... [more]
Y0701_DICDI9.366e-1140.96Probable serine/threonine-protein kinase DDB_G0272... [more]
KS6AA_XENLA9.366e-1132.80Ribosomal protein S6 kinase 2 alpha OS=Xenopus lae... [more]
KPCA_RAT9.366e-1131.85Protein kinase C alpha type OS=Rattus norvegicus G... [more]
KPCA_RABIT9.366e-1131.85Protein kinase C alpha type OS=Oryctolagus cunicul... [more]
KPCA_HUMAN9.366e-1131.85Protein kinase C alpha type OS=Homo sapiens GN=PRK... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1CA09RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305577 ID=DY305577; Name=DY305577; organism=Citrus sinensis; type=EST; length=878bp
GCTGACTGGTGGGCATTGGGAGTCCTAATTTATTTCATGTTACAAGGTGA
AATGCCATTTGGATCTTGGAGAGAGAGTGAAATAGATATTGTTGCAAAGA
TTGCAAAAGGGCAGCTAAGTCTTCCACAGAATTTAAGCCATGAAGCTGTT
GATCTCCTTACAAAGTTGCTCGTAGTTGATGAAAATACAAGACTTGGTAG
CCAAGGTCCCACTTCTGTCAAAACTCACCCATGGTTCAGAGATGTTGATT
GGAAAGGGATTGCTGAATCTACTTCTCCTGTTCCACATGAGATAATGTCT
CGCATAAGTCAACACCTGGATAGTCATTTTGAGGATTCTCCTGTTTTTCA
AGCTTCTCCGCCTCGAGATGTTGAAGAACTCAATGTTCCTGAATGGCTTG
ATGACTGGTAGGAGTATGATTGGTATCTTTAGTTTTGGTTCTGTTACGCT
ATTACGTCTTGCCCAGAAGTTCTTTCCTTGGTTTCTTCCCTGCCTGGCTC
TTGGCTTATTTGGAAGTTTGAAGAGCACACATTTCGAAGTAGAAGTAGGT
AAACAATAGAGAAAACAAAAATAGAATTGCAGGTTGCAGCCACGGCCTAC
ATTTGCTCATAATCCTATGATTTTGTTTTTGTGCCGTAGTTGATGATGCG
AAGGGGGTTGGTTACCTCTTTTGAGTAATTGTGCAGTTTCGTAATTAGCC
ATCTAACTAATTCATTGGAGAAGCCAAATTAGTAGTTTTTTTTTTTTTTC
AGTTTTTATATTTTTTAAGTGATGTAAATACGTAAATATGTAAATGAACC
AGGTTCCCTCATGTTTTAAATTTGTAATTCTAGCTTTCTACTTTTATTTT
CATTTTGATAATGTAAAAAGTTGGCAAG
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