DY305576

Overview
NameDY305576
Unique NameDY305576
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1246
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305576 vs. ExPASy Swiss-Prot
Match: NAMA_BACHD (NADPH dehydrogenase OS=Bacillus halodurans GN=namA PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.871e-24
Identity = 69/215 (32.09%), Postives = 107/215 (49.77%), Query Frame = 3
Query:  102 LLTPYNMGSLNLSHRVVLAPLTRQRS--YNNVPQPHAILYYSQRTT-KGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAV 737
            L + Y +  + L +R+V++P+    S   +   +P  I +Y  R   + GL+I EAT V+   +  P   GIW+ + +      V+ +HA G     Q+ H GR +  D                 P I  + +   +   P  +  ++I + +  F+L A  A +AGFD IE+HGAHGYLI++F+    N RTD YGGSLENR R   EI+  +
Sbjct:    5 LFSSYVVKGVTLKNRIVMSPMCMYSSDQKDGKIRPFHISHYESRAAGQVGLIIVEATAVTPQGRISPYDLGIWSDDHISGLTETVERIHAHGAKAAIQLAHAGRKAELD----------------GPIIAPSAISYDKMKTPDAMTEEQISETIEAFKLGALRAKKAGFDIIEIHGAHGYLINEFLSPLTNKRTDAYGGSLENRYRLLREIISEI 203          
BLAST of DY305576 vs. ExPASy Swiss-Prot
Match: BAICD_EUBSP (Bile acid-inducible operon protein CD OS=Eubacterium sp. (strain VPI 12708) GN=baiCD PE=3 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.871e-24
Identity = 71/221 (32.13%), Postives = 105/221 (47.51%), Query Frame = 3
Query:  102 LLTPYNMGSLNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTTKGG--LLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD 758
            L +P+ +  L L +R+VL  +  + + N       ++ Y     K G  L I E   +      Y    G++T   VE  K + DAVH  GG    Q+WH G                      +PQ+  +  +  +   P  L  + I +IV +F   AR A++AGFD +E H AH YL  +F+   +N RTD+YGGS ENRCRF  E+V+A+ + I  D
Sbjct:    6 LFSPFKVRGLELKNRIVLPGMNTKMAKNKHDIGEDMIAYHVARAKAGCALNIFECVALCPAPHAYMYM-GLYTDHHVEQLKKLTDAVHEAGGKMGIQLWHGG---------------------FSPQMFFDETNTLE--TPDTLTVERIHEIVEEFGRGARMAVQAGFDAVEFHAAHSYLPHEFLSPGMNKRTDEYGGSFENRCRFCYEVVQAIRSNIPDD 202          
BLAST of DY305576 vs. ExPASy Swiss-Prot
Match: NAMA_BACCR (NADPH dehydrogenase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=namA PE=3 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 3.192e-24
Identity = 76/231 (32.90%), Postives = 112/231 (48.48%), Query Frame = 3
Query:  102 LLTPYNMGSLNLSHRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRGWDKTISV 785
            L +PY + ++ L +R+V++P+    S N    V   H I Y ++   + GL++ EAT V    +   +  GIW    +E        +H  G     Q+ H GR +  D      + I   DK   P                 +   +I + +  F+ AA  + +AGFD IELHGAHGYLI++F+    N RTD+YGGS ENR RF  EI+++V NE+     WD  I V
Sbjct:    5 LFSPYTIKNVTLKNRIVMSPMCMYSSGNEDGRVTNFHLIHYGTRAAGQVGLVMVEATAVLAEGRISNNDLGIWDDNLIEGLHKTTTFIHDNGAKAAIQLAHAGRKAELDTNAFAPSAIPFNDKMKIPV---------------EMNIQQIKETILAFQRAALRSKQAGFDVIELHGAHGYLINEFLSPLTNKRTDKYGGSPENRYRFLREIIDSV-NEV-----WDGPIFV 214          
BLAST of DY305576 vs. ExPASy Swiss-Prot
Match: NAMA_BACSU (NADPH dehydrogenase OS=Bacillus subtilis GN=namA PE=1 SV=3)

HSP 1 Score: 112.849 bits (281), Expect = 4.169e-24
Identity = 67/215 (31.16%), Postives = 108/215 (50.23%), Query Frame = 3
Query:  102 LLTPYNMGSLNLSHRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAV 737
            L TP  +  + L +R+V++P+    S+     +   H   Y S+   + GL+I EA+ V+   +      GIW+ E +E +  + + V  +G     Q+ H GR +  +      + I+  ++  TP                 +  +++ + V +F+ AA  A EAGFD IE+H AHGYLI +F+    N RTD+YGGS ENR RF  EI++ V
Sbjct:    5 LFTPITIKDMTLKNRIVMSPMCMYSSHEKDGKLTPFHMAHYISRAIGQVGLIIVEASAVNPQGRITDQDLGIWSDEHIEGFAKLTEQVKEQGSKIGIQLAHAGRKAELEGDIFAPSAIAFDEQSATPV---------------EMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEV 204          
BLAST of DY305576 vs. ExPASy Swiss-Prot
Match: NAMA_BACC4 (NADPH dehydrogenase OS=Bacillus cereus (strain B4264) GN=namA PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 4.169e-24
Identity = 76/231 (32.90%), Postives = 112/231 (48.48%), Query Frame = 3
Query:  102 LLTPYNMGSLNLSHRVVLAPLTRQRSYN---NVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRGWDKTISV 785
            L +PY + ++ L +R+V++P+    S N   +V   H I Y ++   + GL++ EAT V    +      GIW    +E        +H  G     Q+ H GR +  D      + I   DK   P                 +   +I + +  F+ AA  + +AGFD IELHGAHGYLI++F+    N RTD+YGGS ENR RF  EI+++V NE+     WD  I V
Sbjct:    5 LFSPYTIKNVTLKNRIVMSPMCMYSSGNEDGSVTNFHLIHYGTRAAGQVGLVMVEATAVLAEGRISNKDLGIWDDNLIEGLHKTTTFIHDNGAKAAIQLAHAGRKAELDTNAFAPSAIPFNDKMKIPV---------------EMNIQQIKETILAFQRAALRSKQAGFDVIELHGAHGYLINEFLSPLTNKRTDKYGGSPENRYRFLREIIDSV-NEV-----WDGPIFV 214          
BLAST of DY305576 vs. ExPASy Swiss-Prot
Match: YQIG_BACSU (Probable NADH-dependent flavin oxidoreductase yqiG OS=Bacillus subtilis GN=yqiG PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.213e-23
Identity = 74/215 (34.42%), Postives = 107/215 (49.77%), Query Frame = 3
Query:   99 PLLTPYNMGS-LNLSHRVVLAPLTRQRSYNNVPQPHAIL-YYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAV 737
            PL  P+   S + +++R+ +AP+T   S  +     A L Y   R+ + G++I     V+   + +P  P I     +   K +  A+ A+G     QI H G     +  P  Q  +  +D      +  NG  IA     R L  +E+  IV  F  A R AIEAGFDG+E+HGA+GYLI QF   + N RTD++GGS E R  F L IV+ V
Sbjct:    7 PLFEPFTFKSGVTINNRIAVAPMTHYASNEDGTISEAELDYIIPRSKEMGMVITACANVTPDGKAFPGQPAIHDDSNIPGLKKLAQAIQAQGAKAVVQIHHGGIECPSELVPQ-QDVVGPSD------VFDNGKQIA-----RALTEEEVENIVKAFGEATRRAIEAGFDGVEIHGANGYLIQQFYSPKTNQRTDRWGGSDEKRLAFPLAIVDEV 209          
BLAST of DY305576 vs. ExPASy Swiss-Prot
Match: NAMA_GEOKA (NADPH dehydrogenase OS=Geobacillus kaustophilus GN=namA PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.702e-23
Identity = 70/215 (32.56%), Postives = 105/215 (48.84%), Query Frame = 3
Query:  102 LLTPYNMGSLNLSHRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAV 737
            L +PY +  L L +R+V++P+           V   H I Y ++   + GL+I EATGV+   +      GIW+ + +   + +V  V   G     Q+ H GR S    +    + +   D   TP               + +   +I + V  F+  AR A EAGFD IE+H AHGYLI++F+    N R D+YGGS ENR RF  E+++AV
Sbjct:    5 LFSPYTIRGLTLKNRIVMSPMCMYSCDTKDGAVRTWHKIHYPARAVGQVGLIIVEATGVTPQGRISERDLGIWSDDHIAGLRELVGLVKEHGAAIGIQLAHAGRKSQVPGEIIAPSAVPFDDSSPTP---------------KEMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAV 204          
BLAST of DY305576 vs. ExPASy Swiss-Prot
Match: NAMA_BACCN (NADPH dehydrogenase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=namA PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 4.609e-23
Identity = 69/215 (32.09%), Postives = 105/215 (48.84%), Query Frame = 3
Query:  102 LLTPYNMGSLNLSHRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAV 737
            L +P+ + ++ L +R+V++P+    S N    V   H I Y ++   + GL++ EAT V+   +      GIW  E +E  +  V  +         Q+ H GR +     P   + I   DK   P   +                ++I   +  F+ AA  + +AGFD IELHGAHGYLI++F+    N RTD+YGG+ ENR RF  EI+ AV
Sbjct:    5 LFSPFTIQNVTLKNRIVMSPMCMYSSENEDGKVTNFHLIHYGTRAMGQVGLVMLEATAVAAEGRISNKDLGIWNDEHIEGLQKTVSFIKEHDSKAAIQLAHAGRKAELHTDPVAPSAIPFNDKMKVPVAMSK---------------EQIQDTITAFQKAAIRSKQAGFDVIELHGAHGYLINEFLSPLSNKRTDEYGGTAENRYRFLREIIHAV 204          
BLAST of DY305576 vs. ExPASy Swiss-Prot
Match: NAMA_LISMF (NADPH dehydrogenase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=namA PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 7.863e-23
Identity = 76/234 (32.48%), Postives = 107/234 (45.73%), Query Frame = 3
Query:  102 LLTPYNMGSLNLSHRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGR---VSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRGWDKTISV 785
            L + Y +  + L +R+V++P+      N        H   Y S+     GL+I EAT V +  +      G+W  EQV A K +VD +H  G     Q+ H GR   +  +   P+  A    +DKP+                   L  + I ++V DF+ AA  A EAGFD IE+H AHGYLI QF+    N R D YGG   NR +   +I++AV         WD  I V
Sbjct:    4 LFSEYKLKDVTLKNRIVMSPMCMYSVENKDGIATDFHFAHYVSRAAGGTGLVILEATAVQEVGRISEFDLGLWNDEQVPALKKLVDGLHYHGAKAGIQLAHAGRKAVLPGEIVAPSAIAFDEKSDKPV------------------ELTKEAIKEVVADFKRAAYRAKEAGFDVIEIHAAHGYLIHQFLSPITNRREDNYGGPAGNRYKILSDIIKAVKEV------WDGPIIV 213          
BLAST of DY305576 vs. ExPASy Swiss-Prot
Match: NAMA_LISMC (NADPH dehydrogenase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=namA PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 7.863e-23
Identity = 76/234 (32.48%), Postives = 107/234 (45.73%), Query Frame = 3
Query:  102 LLTPYNMGSLNLSHRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGR---VSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRGWDKTISV 785
            L + Y +  + L +R+V++P+      N        H   Y S+     GL+I EAT V +  +      G+W  EQV A K +VD +H  G     Q+ H GR   +  +   P+  A    +DKP+                   L  + I ++V DF+ AA  A EAGFD IE+H AHGYLI QF+    N R D YGG   NR +   +I++AV         WD  I V
Sbjct:    4 LFSEYKLKDVTLKNRIVMSPMCMYSVENKDGIATDFHFAHYVSRAAGGTGLVILEATAVQEVGRISEFDLGLWNDEQVPALKKLVDGLHYHGAKAGIQLAHAGRKAVLPGEIVAPSAIAFDEKSDKPV------------------ELTKEAIKEVVADFKRAAYRAKEAGFDVIEIHAAHGYLIHQFLSPITNRREDNYGGPAGNRYKILSDIIKAVKEV------WDGPIIV 213          
The following BLAST results are available for this feature:
BLAST of DY305576 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
NAMA_BACHD1.871e-2432.09NADPH dehydrogenase OS=Bacillus halodurans GN=namA... [more]
BAICD_EUBSP1.871e-2432.13Bile acid-inducible operon protein CD OS=Eubacteri... [more]
NAMA_BACCR3.192e-2432.90NADPH dehydrogenase OS=Bacillus cereus (strain ATC... [more]
NAMA_BACSU4.169e-2431.16NADPH dehydrogenase OS=Bacillus subtilis GN=namA P... [more]
NAMA_BACC44.169e-2432.90NADPH dehydrogenase OS=Bacillus cereus (strain B42... [more]
YQIG_BACSU1.213e-2334.42Probable NADH-dependent flavin oxidoreductase yqiG... [more]
NAMA_GEOKA2.702e-2332.56NADPH dehydrogenase OS=Geobacillus kaustophilus GN... [more]
NAMA_BACCN4.609e-2332.09NADPH dehydrogenase OS=Bacillus cereus subsp. cyto... [more]
NAMA_LISMF7.863e-2332.48NADPH dehydrogenase OS=Listeria monocytogenes sero... [more]
NAMA_LISMC7.863e-2332.48NADPH dehydrogenase OS=Listeria monocytogenes sero... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1CA07RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305576 ID=DY305576; Name=DY305576; organism=Citrus sinensis; type=EST; length=1246bp
GGCTTGTAATTCTACTAAACATGGGAAACAGAGCAGAGGAGGCTAAGCAA
AATCAAGAAGAGAACAACGGTAACATGGCCATTGAAACTCCCATCATCCC
TCTTCTCACTCCTTACAATATGGGCAGTCTCAATCTTTCTCATAGAGTTG
TTTTGGCACCACTGACTAGACAGAGATCATACAACAATGTTCCTCAGCCA
CATGCCATTTTGTATTACTCTCAAAGAACCACCAAAGGGGGTTTGCTTAT
AGCCGAAGCCACTGGAGTTTCCGACACTGCTCAAGGGTATCCAGATACAC
CTGGTATCTGGACAAAGGAGCAAGTTGAAGCATGGAAACCGATTGTAGAT
GCTGTTCATGCCAAAGGTGGGATCTTCTTTTGTCAGATTTGGCACGTTGG
CAGGGTTTCAAATCAAGATTATCAGCCAAATGGTCAAGCTCCAATTTCCA
GTACAGACAAGCCATTGACCCCTCAAATCCGCGCTAATGGTGTTGATATT
GCACAATTCACTCCTCCAAGGCGGCTAAGGACAGATGAAATCCCTCAAAT
TGTGAATGATTTCAGGCTTGCTGCAAGAAACGCAATTGAGGCTGGTTTTG
ATGGCATTGAGCTCCACGGTGCACATGGCTACCTAATTGACCAATTTATG
AAGGATCAAGTGAATGATCGAACAGACCAGTATGGAGGATCCTTAGAGAA
TCGTTGCCGTTTTGCTTTAGAAATAGTTGAAGCTGTTTCCAATGAAATAG
GGGCAGATAGGGGTTGGGATAAGACTATCTCCGTTTGCAAACTATATGGA
ATCAGGAGACTCTAACCCAGAAGCTTTAGGTCTTTACATGGCAAAATCCT
TGAACAAATATGGTATCCTCTATTGTCACATGGTTGGAGCCAGGGATGAA
AACAGTTGGAGAAAAATCTGAATGTCCCTCAAGTTTGCTGCCCCTGAAAG
GGCTTTCAAGGGTAATTTTTCTGGCCCCTGGGGGTTTTGAACGGGGAAGA
AGGGAAACAAAGCTATGGCTGAAAGGCGTGGCGAATCTTGTTGTTTTTGG
GTCCCCTGTTGTCTGGGCCTATATAAAAAATAACCCCGAAAAATTTTGAT
CCAATTGTCCCCCCTTAAATTAAATTACAAAAAAAAAAACATTTTCCACA
CAATCCCACACTTCTTTTTTTGGTGGGGTTTACCACCGAAAATTTTTCCC
TATTTTTCCCCAACACCACCCTTCTTTCTCTTTGGGGGTTTTACAC
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