DY305576

Overview
NameDY305576
Unique NameDY305576
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1246
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305576 vs. ExPASy Swiss-Prot
Match: NAMA_BACC2 (NADPH dehydrogenase OS=Bacillus cereus (strain G9842) GN=namA PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.027e-22
Identity = 75/234 (32.05%), Postives = 112/234 (47.86%), Query Frame = 3
Query:  102 LLTPYNMGSLNLSHRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGR---VSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRGWDKTISV 785
            L +PY + ++ L +R+V++P+    S N    V   H I Y ++   + GL++ EAT V    +      GIW    +E        +H  G     Q+ H GR   +    + P+   P S T K                  P  +   +I + +  F+ AA  + +AGFD IELHGAHGYLI++F+    N RTD+YGGS ENR RF  EI+++V      ++ WD  I V
Sbjct:    5 LFSPYTIKNVTLKNRIVMSPMCMYSSGNEDGRVTNFHLIHYGTRAAGQVGLVMVEATAVLAEGRISNKDLGIWDDNLIEGLHKTTTFIHDNGAKAAIQLAHAGRKAELGTNAFAPSA-IPFSDTMKI-----------------PVEMNIQQIKETILAFQRAALRSKQAGFDVIELHGAHGYLINEFLSPLTNKRTDEYGGSPENRYRFLREIIDSV------NKVWDGPIFV 214          
BLAST of DY305576 vs. ExPASy Swiss-Prot
Match: NADO_THEBR (NADH oxidase OS=Thermoanaerobacter brockii PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.027e-22
Identity = 78/227 (34.36%), Postives = 110/227 (48.46%), Query Frame = 3
Query:  102 LLTPYNMGSLNLSHRVVLAPL-TRQRSYNNVPQPHAILYYSQRTTKG-GLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWK------PIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD 758
            L +   +G+L + +R+V+ P+ T   + +       I YY  R   G GL+I E   V      YP    +  + +++  K       + +AVH+ G   F QI H GR +       G  P++ +  P +             T PR L  +EI +I+  F  AA  A  A FDGIELHGAHGYLI QFM  + N R D+YGGS E R RF LEI+  +   +G D
Sbjct:    7 LFSEGRIGNLVIRNRIVMPPMATNLANEDGSVSQRLIDYYVARARGGVGLIILENVQVD-----YPQGKNVACQLRLDDDKYMAGFFELAEAVHSYGAKIFMQIHHAGRQTTPGIT-EGLQPVAPSPVPCS----------FLGTQPRELTINEIEEIIQKFVDAAVRAKGAMFDGIELHGAHGYLIGQFMSPRTNRRVDKYGGSFERRMRFPLEIIRRIKEAVGED 217          
BLAST of DY305576 vs. ExPASy Swiss-Prot
Match: FADH_ECOLI (2,4-dienoyl-CoA reductase [NADPH] OS=Escherichia coli (strain K12) GN=fadH PE=1 SV=3)

HSP 1 Score: 108.227 bits (269), Expect = 1.027e-22
Identity = 74/221 (33.48%), Postives = 113/221 (51.13%), Query Frame = 3
Query:  102 LLTPYNMGSLNLSHRVVLAPL-TRQRSYNNVPQPHAILYYSQRTTKGGLLIAEATGVSD-TAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD 758
            L  P ++G   L +RV++  + T    Y +  +  A  +Y++R   G  LI       D T  G      +    Q+   + I +AVH +GG    QI H GR S   YQP+  AP S+   P+   +            P  L  +EI Q++++F   A+ A EAG+DG+E+ G+ GYLI++F+  + N R+DQ+GG   NR RFA+E+V AV   +G D
Sbjct:    6 LFAPLDLGFTTLKNRVLMGSMHTGLEEYPDGAERLAA-FYAERARHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHRTITEAVHQEGGKIALQILHTGRYS---YQPHLVAP-SALQAPINRFV------------PHELSHEEILQLIDNFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGND 209          
BLAST of DY305576 vs. ExPASy Swiss-Prot
Match: NAMA_LISW6 (NADPH dehydrogenase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=namA PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.288e-22
Identity = 74/231 (32.03%), Postives = 106/231 (45.89%), Query Frame = 3
Query:  102 LLTPYNMGSLNLSHRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRGWDKTISV 785
            L + Y +  + L +R+V++P+      N        H   Y S+     GL+I EAT V +  +      G+W  EQV A K +VD +H+ G     Q+ H GR +    +    + I+  +K   P                 L  + I ++V DF+ AA  A EAGFD IE+H AHGYLI QF+    N R D YGG   NR +   +I++AV         WD  I V
Sbjct:    4 LFSEYKLKDVTLKNRIVMSPMCMYSVENKDGIATDFHFAHYVSRAAGGTGLVILEATAVQEVGRISEFDLGLWNDEQVPALKHLVDGLHSHGAKAGIQLAHAGRKAVLPGEIVAPSAIAYDEKSAKPV---------------ELTKEAIKEVVADFKRAAYRAKEAGFDVIEIHAAHGYLIHQFLSPITNRREDNYGGPAGNRYKILSDIIKAVKEV------WDGPIIV 213          
BLAST of DY305576 vs. ExPASy Swiss-Prot
Match: NAMA_LISMO (NADPH dehydrogenase OS=Listeria monocytogenes GN=namA PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 5.096e-22
Identity = 75/234 (32.05%), Postives = 106/234 (45.30%), Query Frame = 3
Query:  102 LLTPYNMGSLNLSHRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGR---VSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRGWDKTISV 785
            L + Y +  + L +R+V++P+      N        H   Y S+     GL+I EAT V +  +      G+W  EQV A K +V  +H  G     Q+ H GR   +  +   P+  A    +DKP+                   L  + I ++V DF+ AA  A EAGFD IE+H AHGYLI QF+    N R D YGG   NR +   +I++AV         WD  I V
Sbjct:    4 LFSEYKLKDVTLKNRIVMSPMCMYSVENKDGIATDFHFAHYVSRAAGGTGLVILEATAVQEVGRISEFDLGLWNDEQVPALKKLVGGLHYHGAKAGIQLAHAGRKAVLPGEIVAPSAIAFDEKSDKPV------------------ELTKEAIKEVVADFKRAAYRAKEAGFDVIEIHAAHGYLIHQFLSPITNRREDNYGGPAGNRYKILSDIIKAVKEV------WDGPIIV 213          
BLAST of DY305576 vs. ExPASy Swiss-Prot
Match: OYEC_SCHPO (Putative NADPH dehydrogenase C23G7.10c OS=Schizosaccharomyces pombe GN=SPBC23G7.10c PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 6.656e-22
Identity = 64/228 (28.07%), Postives = 108/228 (47.37%), Query Frame = 3
Query:   78 AIETPIIPLLTPYNMGSLNLSHRVVLAPLTRQRS--YNNVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDI--AQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEI 749
            AI  P   L TP  +  +   +R+ ++P+    +    ++   H +   +      GL++ EAT VS   +  P+  G+W + Q++  + IV+  H++      Q+ H GR ++      G    +         +     D        P +L   +  ++V+ F +AA+ A+E GFD IE+HGAHGYLI   +    NDR D+YGG+ E R  F +E+V +V   I
Sbjct:   25 AIGVPQTKLFTPLKIRGVEFHNRMFVSPMCTYSADQEGHLTDFHLVHLGAMGMRGPGLVMVEATAVSPEGRISPNDSGLWMESQMKPLRRIVEFAHSQNQKIGIQLAHAGRKASTTAPYRGYTVATEAQGGWENDVYGPNEDRWDENHAQPHKLTEKQYDELVDKFVVAAKRAVEIGFDVIEIHGAHGYLISSTVSPATNDRNDKYGGTFEKRILFPMEVVHSVRKAI 252          
BLAST of DY305576 vs. ExPASy Swiss-Prot
Match: NAMA_LISMH (NADPH dehydrogenase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=namA PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 8.693e-22
Identity = 74/231 (32.03%), Postives = 104/231 (45.02%), Query Frame = 3
Query:  102 LLTPYNMGSLNLSHRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRGWDKTISV 785
            L + Y +  + L +R+V++P+      N        H   Y S+     GL+I EAT V +  +      G+W  EQV A K +VD +H  G     Q+ H GR +    +    + I   +K   P                 L  + I ++V DF+ AA  A EAGFD IE+H AHGYLI QF+    N R D YGG   NR +   +I++AV         WD  I V
Sbjct:    4 LFSEYKLKDVTLKNRIVMSPMCMYSVENKDGIATDFHFAHYVSRAAGGTGLVILEATAVQEVGRISEFDLGLWNDEQVPALKRLVDGLHYHGAKAGIQLAHAGRKAVLPGEIVAPSAIPFDEKSAKPV---------------ELTKEAIKEVVADFKRAAYRAKEAGFDVIEIHAAHGYLIHQFLSPITNRREDNYGGPAGNRYKILSDIIKAVKEV------WDGPIIV 213          
BLAST of DY305576 vs. ExPASy Swiss-Prot
Match: NAMA_BACCQ (NADPH dehydrogenase OS=Bacillus cereus (strain Q1) GN=namA PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 8.693e-22
Identity = 71/221 (32.13%), Postives = 105/221 (47.51%), Query Frame = 3
Query:  102 LLTPYNMGSLNLSHRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSN--QDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEI 749
            L +PY +  + L +R+V++P+    S N    +   H I Y ++   + GL++ EAT V    +      GIW    +E        +H  G     Q+ H GR +    D       P + T K                  P  +   +I   V  F+ AA  + +AGFD IE+HGAHGYLI++F+    N RTD+YGGS ENR RF  EI+E++ NE+
Sbjct:    5 LFSPYTIKDVTLKNRIVMSPMCMYSSKNEDGQITNFHLIHYGTRAAGQVGLVMIEATAVLPEGRISNKDLGIWDDSLIEGLHKATTFIHDNGAKAAIQLAHAGRKAELETDALAPSAIPFNETMKM-----------------PIEMSKHQIKDTVLAFQQAAVRSKQAGFDVIEIHGAHGYLINEFLSPLTNKRTDEYGGSPENRYRFLREIIESI-NEV 207          
BLAST of DY305576 vs. ExPASy Swiss-Prot
Match: NAMA_BACC7 (NADPH dehydrogenase OS=Bacillus cereus (strain AH187) GN=namA PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 8.693e-22
Identity = 71/221 (32.13%), Postives = 105/221 (47.51%), Query Frame = 3
Query:  102 LLTPYNMGSLNLSHRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSN--QDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEI 749
            L +PY +  + L +R+V++P+    S N    +   H I Y ++   + GL++ EAT V    +      GIW    +E        +H  G     Q+ H GR +    D       P + T K                  P  +   +I   V  F+ AA  + +AGFD IE+HGAHGYLI++F+    N RTD+YGGS ENR RF  EI+E++ NE+
Sbjct:    5 LFSPYTIKDVTLKNRIVMSPMCMYSSKNEDGQITNFHLIHYGTRAAGQVGLVMIEATAVLPEGRISNKDLGIWDDSLIEGLHKATTFIHDNGAKAAIQLAHAGRKAELETDALAPSAIPFNETMKM-----------------PIEMSKHQIKDTVLAFQQAAVRSKQAGFDVIEIHGAHGYLINEFLSPLTNKRTDEYGGSPENRYRFLREIIESI-NEV 207          
BLAST of DY305576 vs. ExPASy Swiss-Prot
Match: NAMA_LISIN (NADPH dehydrogenase OS=Listeria innocua GN=namA PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.483e-21
Identity = 74/231 (32.03%), Postives = 104/231 (45.02%), Query Frame = 3
Query:  102 LLTPYNMGSLNLSHRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRGWDKTISV 785
            L + Y +  + L +R+V++P+      N        H   Y S+     GL+I EAT V +  +      G+W  EQV A K +VD +H  G     Q+ H GR +    +    + I   +K   P                 L  + I ++V DF+ AA  A EAGFD IE+H AHGYLI QF+    N R D YGG   NR +   +I++AV         WD  I V
Sbjct:    4 LFSEYKLKDVTLKNRIVMSPMCMYSVENKDGIATDFHFAHYVSRAAGGTGLVILEATAVQEVGRISEFDLGLWNDEQVPALKRLVDGLHYHGAKAGIQLAHAGRKAVLPGEIVAPSAIPFDEKSAKPV---------------ELTKEAIKEVVADFKRAAYRAKEAGFDVIEIHAAHGYLIHQFLSPISNRREDNYGGPAGNRYKILSDIIKAVKEV------WDGPIIV 213          
The following BLAST results are available for this feature:
BLAST of DY305576 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
NAMA_BACC21.027e-2232.05NADPH dehydrogenase OS=Bacillus cereus (strain G98... [more]
NADO_THEBR1.027e-2234.36NADH oxidase OS=Thermoanaerobacter brockii PE=1 SV... [more]
FADH_ECOLI1.027e-2233.482,4-dienoyl-CoA reductase [NADPH] OS=Escherichia c... [more]
NAMA_LISW62.288e-2232.03NADPH dehydrogenase OS=Listeria welshimeri serovar... [more]
NAMA_LISMO5.096e-2232.05NADPH dehydrogenase OS=Listeria monocytogenes GN=n... [more]
OYEC_SCHPO6.656e-2228.07Putative NADPH dehydrogenase C23G7.10c OS=Schizosa... [more]
NAMA_LISMH8.693e-2232.03NADPH dehydrogenase OS=Listeria monocytogenes sero... [more]
NAMA_BACCQ8.693e-2232.13NADPH dehydrogenase OS=Bacillus cereus (strain Q1)... [more]
NAMA_BACC78.693e-2232.13NADPH dehydrogenase OS=Bacillus cereus (strain AH1... [more]
NAMA_LISIN1.483e-2132.03NADPH dehydrogenase OS=Listeria innocua GN=namA PE... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1CA07RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305576 ID=DY305576; Name=DY305576; organism=Citrus sinensis; type=EST; length=1246bp
GGCTTGTAATTCTACTAAACATGGGAAACAGAGCAGAGGAGGCTAAGCAA
AATCAAGAAGAGAACAACGGTAACATGGCCATTGAAACTCCCATCATCCC
TCTTCTCACTCCTTACAATATGGGCAGTCTCAATCTTTCTCATAGAGTTG
TTTTGGCACCACTGACTAGACAGAGATCATACAACAATGTTCCTCAGCCA
CATGCCATTTTGTATTACTCTCAAAGAACCACCAAAGGGGGTTTGCTTAT
AGCCGAAGCCACTGGAGTTTCCGACACTGCTCAAGGGTATCCAGATACAC
CTGGTATCTGGACAAAGGAGCAAGTTGAAGCATGGAAACCGATTGTAGAT
GCTGTTCATGCCAAAGGTGGGATCTTCTTTTGTCAGATTTGGCACGTTGG
CAGGGTTTCAAATCAAGATTATCAGCCAAATGGTCAAGCTCCAATTTCCA
GTACAGACAAGCCATTGACCCCTCAAATCCGCGCTAATGGTGTTGATATT
GCACAATTCACTCCTCCAAGGCGGCTAAGGACAGATGAAATCCCTCAAAT
TGTGAATGATTTCAGGCTTGCTGCAAGAAACGCAATTGAGGCTGGTTTTG
ATGGCATTGAGCTCCACGGTGCACATGGCTACCTAATTGACCAATTTATG
AAGGATCAAGTGAATGATCGAACAGACCAGTATGGAGGATCCTTAGAGAA
TCGTTGCCGTTTTGCTTTAGAAATAGTTGAAGCTGTTTCCAATGAAATAG
GGGCAGATAGGGGTTGGGATAAGACTATCTCCGTTTGCAAACTATATGGA
ATCAGGAGACTCTAACCCAGAAGCTTTAGGTCTTTACATGGCAAAATCCT
TGAACAAATATGGTATCCTCTATTGTCACATGGTTGGAGCCAGGGATGAA
AACAGTTGGAGAAAAATCTGAATGTCCCTCAAGTTTGCTGCCCCTGAAAG
GGCTTTCAAGGGTAATTTTTCTGGCCCCTGGGGGTTTTGAACGGGGAAGA
AGGGAAACAAAGCTATGGCTGAAAGGCGTGGCGAATCTTGTTGTTTTTGG
GTCCCCTGTTGTCTGGGCCTATATAAAAAATAACCCCGAAAAATTTTGAT
CCAATTGTCCCCCCTTAAATTAAATTACAAAAAAAAAAACATTTTCCACA
CAATCCCACACTTCTTTTTTTGGTGGGGTTTACCACCGAAAATTTTTCCC
TATTTTTCCCCAACACCACCCTTCTTTCTCTTTGGGGGTTTTACAC
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