DY305575
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_SULIA (Probable spermidine synthase OS=Sulfolobus islandicus (strain M.16.27) GN=speE PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 1.179e-42 Identity = 101/240 (42.08%), Postives = 143/240 (59.58%), Query Frame = 1 Query: 178 LNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLC-HQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFL-TVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFAKTWGMGMASDHPFPIMLRKSTTGSRTR 891 + +V + + +Q + L++ RFGK L+IDGK+QS DE IYHE L+HP LL + PK V I+GGGEG+ RE LK+KS+E VM DID++V++F +++L +Q AF K+ +LV+ D + + +K+D I DL DP++ Y LYTK FYE+ L+ LN G VTQA T EV+ +IYNTIK+VFK A ++ SF WG P +L + SR R Sbjct: 21 IEKVFAEEKTPYQHVTLVEFTRFGKGLIIDGKVQSTLYDEHIYHELLVHPLLLSLPKPPKNVLILGGGEGATLREVLKYKSVEKAVMVDIDEKVIEFAKKYLYEWHQGAFEDKRTSLVITDGLKFINETKDKYDAIILDLTDPIKDSTSYMLYTKEFYEK-LRGILNQGGGIVTQA--TSPSFSLEVYVTIYNTIKEVFKEASASYTYMASFDGLWGFVYGGVR--PDLLSEDEVNSRIR 255
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_SULIN (Probable spermidine synthase OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=speE PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 1.539e-42 Identity = 100/240 (41.67%), Postives = 143/240 (59.58%), Query Frame = 1 Query: 178 LNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLC-HQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFL-TVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFAKTWGMGMASDHPFPIMLRKSTTGSRTR 891 + +V + + +Q + L++ RFGK L+IDGK+QS DE IYHE L+HP LL + PK V I+GGGEG+ RE LK+KS+E VM DID++V++F +++L +Q AF K+ +L++ D + + +K+D I DL DP++ Y LYTK FYE+ L+ LN G VTQA T EV+ +IYNTIK+VFK A ++ SF WG P +L + SR R Sbjct: 21 IEKVFAEEKTPYQHVTLVEFTRFGKGLIIDGKVQSTLYDEHIYHELLVHPLLLSLPKPPKNVLILGGGEGATLREVLKYKSVEKAVMVDIDEKVIEFAKKYLYEWHQGAFEDKRTSLIITDGLKFINETKDKYDAIILDLTDPIKDSTSYMLYTKEFYEK-LRGILNQGGGIVTQA--TSPSFSLEVYVTIYNTIKEVFKEASASYTYMASFDGLWGFVYGGVR--PDLLSEDEVNSRIR 255
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE2_PSEAE (Spermidine synthase 2 OS=Pseudomonas aeruginosa GN=speE2 PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 1.303e-41 Identity = 88/229 (38.43%), Postives = 138/229 (60.26%), Query Frame = 1 Query: 163 KWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFL-TVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKE--VFSSIYNTIKQVFKHVVAYTAHVPSFAKTWGMGMASD 840 ++ + L RVL++G + +Q++ + DT + +VL++DG +QSAE DE +YHE L+ P +L H P+ V I+GGGEG+ RE L H S+ VM D+D+E+V+ CR L +Q AF + L+ D +A LE+ +DV+ D+ D ++ GP LYT+ FYE +L +L G+ Q F+H + +++ T++ VF V +Y A VPSF +WG +ASD Sbjct: 43 QYVYRLRRVLYQGRTRWQNVLIADTYNYDRVLMLDGAIQSAESDESLYHELLVQPAMLAHDEPRDVLIIGGGEGATLREVLSHASVRRAVMVDLDRELVELCREHLFQWHQGAFDDPRCELLAEDGRAYLERDPSLYDVVIIDVVDMLDNGPAQALYTRQFYE-LLHSRLRPGGVVAVQGLE---FSHSDDKPHAALARTLRSVFSQVHSYRATVPSFLSSWGFLLASD 267
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_SYNJB (Spermidine synthase OS=Synechococcus sp. GN=speE PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 2.717e-39 Identity = 90/230 (39.13%), Postives = 138/230 (60.00%), Query Frame = 1 Query: 175 ALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLL----CHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFL-TVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTG-IFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFAKTWGMGMASDHP 846 A+ R+L + FQ++ + +T FGK L++DG QS VDEF+YHE L+HP ++ P+ V ++GG EG+ RE L+ +S+E VVM DID EVV CR L ++Q +F ++ +V+ DA L++ +DVI DL+DP+E GP Y+L+T+ F+ +I + KL +G F QAGPTG + H+ + I T+K VF V Y + P++ G +A+ P Sbjct: 23 AVTRILAYRKTPFQEMLIAETGAFGKGLMLDGHWQSTTVDEFLYHEALVHPAMVQVVQAGGIPRRVLVLGGAEGATLREVLRWRSVEQVVMVDIDGEVVAACREHLPEMHQGSFEDPRVEVVIADALDFLQETGPIWDVILSDLSDPIESGPAYRLFTQEFFRQI-RSKLQPDGAFTIQAGPTGPVELHQH--TRIVRTLKTVFAAVQPYAIYAPTYGGPLGFALAAQDP 249
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_SYNJA (Spermidine synthase OS=Synechococcus sp. (strain JA-3-3Ab) GN=speE PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 7.906e-39 Identity = 90/232 (38.79%), Postives = 136/232 (58.62%), Query Frame = 1 Query: 175 ALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLL----CHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFL-TVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTG---IFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFAKTWGMGMASDHP 846 A+ R+L + FQ++ + +T +GK L++DG QS DEF+YHE L+HP L+ P+ V I+GG EG+ RE L+ +S+E VVM DID EVV+ CR L ++Q +F + +V+ DA L + +D I DL+DPVE GP Y+L+T+ F+ ++ + KL G FV QAGPTG ++ H + I +T+K VF V Y + P++ G +A+ P Sbjct: 23 AITRILAYRKTRFQEMLIAETGAYGKGLMLDGHWQSTTADEFLYHEALVHPALVQVVQAGGIPRRVLILGGAEGATLREVLRWRSVEQVVMVDIDGEVVEACREHLPEMHQGSFADPRAEVVIADALDFLGQTEPIWDAILSDLSDPVEAGPAYRLFTQEFFRQV-RSKLQTAGAFVIQAGPTGPVELWQH----TRIVHTLKTVFAAVQPYAIYAPTYGGPLGFALAAQDP 249
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_THEPX (Spermidine synthase OS=Thermoanaerobacter sp. (strain X514) GN=speE PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 1.033e-38 Identity = 81/236 (34.32%), Postives = 138/236 (58.47%), Query Frame = 1 Query: 133 WFEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSF-AKTWGMGMAS 837 WF E D++L++S + L + +Q +A+LDT +FG+VL +DG +Q+ E DEF+YHE ++H PL H+NPK+V I+GGG+G + RE LKH S+E VV+ +ID+ VV +++L +A ++ +++ D + + +FDV+ D DP+ GP L+T FY+ + + L ++GI V Q F + ++ + + K+++ AY A +P++ W M S Sbjct: 4 WFTENQDENLRFSLKVKETLVVEKTPYQHLAILDTYQFGRVLTLDGILQTTEKDEFVYHEMIVHVPLFTHKNPKSVLIVGGGDGGSVREVLKHPSVERVVLAEIDEAVVRNSKKYLPTISQALDDPRVEIMIGDGIKYVNEHKNEFDVVIVDSTDPI--GPAVGLFTSDFYKAVYE-CLKEDGIIVAQT--ESPFIYGKLINKLSKMFKEIYPITKAYIATIPTYPGSLWTFTMGS 234
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_THEP3 (Spermidine synthase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=speE PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 1.033e-38 Identity = 81/236 (34.32%), Postives = 138/236 (58.47%), Query Frame = 1 Query: 133 WFEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSF-AKTWGMGMAS 837 WF E D++L++S + L + +Q +A+LDT +FG+VL +DG +Q+ E DEF+YHE ++H PL H+NPK+V I+GGG+G + RE LKH S+E VV+ +ID+ VV +++L +A ++ +++ D + + +FDV+ D DP+ GP L+T FY+ + + L ++GI V Q F + ++ + + K+++ AY A +P++ W M S Sbjct: 4 WFTENQDENLRFSLKVKETLVVEKTPYQHLAILDTYQFGRVLTLDGILQTTEKDEFVYHEMIVHVPLFTHKNPKSVLIVGGGDGGSVREVLKHPSVERVVLAEIDEAVVRNSKKYLPTISQALDDPRVEIMIGDGIKYVNEHKNEFDVVIVDSTDPI--GPAVGLFTSDFYKAVYE-CLKEDGIIVAQT--ESPFIYGKLINKLSKMFKEIYPITKAYIATIPTYPGSLWTFTMGS 234
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_CALS8 (Spermidine synthase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=speE PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 1.761e-38 Identity = 82/247 (33.20%), Postives = 141/247 (57.09%), Query Frame = 1 Query: 133 WFEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSF-AKTWGMGMASDHPFPIMLRKS 870 WF E DL ++ + + ++ +++QD+A+L+TK+FGK+LV+DG +Q+ VDEF YHE + H PL H NPK V ++GGG+G RE LKH+ +E + +IDQEV++ +++L A K+ +++ D + + FDVI D DPV GP L+ +FY+ + + L ++G+FV Q F +++ +++++IK +F Y +P++ + W M S P+ + S Sbjct: 7 WFTEQQTPDLGFTCKITKTIYTAKTKYQDLAILETKQFGKMLVLDGAVQTTIVDEFCYHELIAHVPLFTHPNPKKVAVIGGGDGGVIREILKHEEVEKAYLIEIDQEVIEASKKYLPEISCALDDKRAEVIITDGIKFVSENKNMFDVIIVDSTDPV--GPAVGLFESNFYQAVYE-CLKEDGLFVAQT--ESPFYDQDLIRNVFHSIKSIFPITRLYLGFIPTYPSGLWSFTMGSKKYDPLEIDTS 248
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE1_THETN (Spermidine synthase 1 OS=Thermoanaerobacter tengcongensis GN=speE1 PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 1.761e-38 Identity = 83/236 (35.17%), Postives = 136/236 (57.63%), Query Frame = 1 Query: 133 WFEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSF-AKTWGMGMAS 837 WF E D++L++S + L + +Q +A+LD+ +FG+VLV+DG +Q+ E DEF+YHE ++H PL H+NPK V I+GGG+G + RE LKH S+E VV+ +ID+ V+ +++L A ++ +++ D + + +FDV+ D DP+ GP L+T FY R + L ++GI V Q F + ++ + I K+++ AY A VP++ W M S Sbjct: 4 WFTEHQDENLRFSIKVKETLVVEKTPYQHLAILDSYQFGRVLVLDGILQTTEKDEFVYHEMIVHVPLFTHKNPKDVLIIGGGDGGSVREVLKHSSVERVVLAEIDEAVIRNSKKYLPTISSALDDPRVEIMIGDGIKYVNEHKNEFDVVIVDSTDPI--GPAVGLFTSDFY-RAVYECLREDGIIVAQT--ESPFIYGKLINKISKMFKEIYPITKAYIATVPTYPGSLWTFTMGS 234
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_METJA (Probable spermidine synthase OS=Methanocaldococcus jannaschii GN=speE PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 2.300e-38 Identity = 86/253 (33.99%), Postives = 147/253 (58.10%), Query Frame = 1 Query: 103 NINGNLQDCCWFEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQV-FKHVVAYTAHVPSF-AKTWGMGMASDHPFPI 855 N N + + WF E ++++ S + +L++ S FQ+I ++DT FGK L++D Q+ E DEFIYHE + H PL H NP+ V ++GGG+G RE +KHKS+E+V ++D++V++ C++++ ++K+NL++ D + + +K+DVI D DPV GP L+ K FY+ + K LND+GI V Q+ + ++ +I +K FK ++ YT +P++ + W +AS P+ Sbjct: 2 NQNNDFKCHIWFTEYHNNNVALSVRVKDILYREKSGFQEIEIIDTYDFGKALILDNTFQTTERDEFIYHELISHIPLFTHPNPRNVLVIGGGDGGTVREVVKHKSVETVDFVELDEKVIEACKKYMPKLSCEIDNEKVNLIITDGIKYVAETEKKYDVIIVDCPDPV--GPAKGLFEKEFYKNVFK-CLNDDGIMVQQS--ESPLYNLDLIQNICRYLKDAGFKIIMPYTYPMPTYPSGFWSFTLASKKYNPL 249 The following BLAST results are available for this feature:
BLAST of DY305575 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 220
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY305575 ID=DY305575; Name=DY305575; organism=Citrus sinensis; type=EST; length=1251bpback to top |