DY305575
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_BACSK (Spermidine synthase OS=Bacillus clausii (strain KSM-K16) GN=speE PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 3.004e-38 Identity = 82/244 (33.61%), Postives = 140/244 (57.38%), Query Frame = 1 Query: 133 WFEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFAK---TWGMGMASDHPFPI 855 WF E + + + R LH ++FQ + +++T+ FG +L++DG + + E DEF+YHE + H PL H NPK V ++GGG+G A RE LKH S+E + DID +V+++ + +L A +++++ V D + + ++DVI D +PV GP +L+ + FYE I K L ++GIFV Q + H+E+ S++Y +K++F YTA++P++ T+ +G P + Sbjct: 4 WFTEKQTERFGITMKIKRTLHTEKTDFQQLDMVETEEFGNMLLLDGMVMTTEKDEFVYHEMVTHVPLFTHPNPKHVLVVGGGDGGAIREILKHPSVEKATLVDIDGKVIEYSKTYLPTIACALEDERVDVKVADGFMHIAQSANEYDVIMVDSTEPV--GPAAKLFERGFYEGISK-ALKEDGIFVAQT--DNPWFHQELVSNVYKDVKEIFPITRLYTANIPTYPSGMWTFTIGSKKHDPLAV 242
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_THEON (Probable spermidine synthase OS=Thermococcus onnurineus (strain NA1) GN=speE PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 3.924e-38 Identity = 85/228 (37.28%), Postives = 136/228 (59.65%), Query Frame = 1 Query: 172 FALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFAKTWG--MGMASDHPF 849 F + L + +++Q + L +T+ FGK+LV+DG +Q E+ E YHE L+HP +L H NP+ V I+GGG+G RE L+HK++E +M +ID+ V++ R ++ V + AF + L+V+D L+ +EKFDVI D DPV GP L+++ F+ + KLNDNG+++TQAG +FT++ Y + +VF V ++ V +A W +G+ D F Sbjct: 22 FRVKERLFETQTKYQRLELYETEGFGKLLVLDGTVQLVEMGEESYHEPLVHPVMLAHPNPRRVLIIGGGDGGTLREVLRHKTVEKAIMVEIDEMVIEVSRIYMNVARGAFEDPRAELIVSDGVEYLKNTDEKFDVIIVDSTDPV--GPAKMLFSEGFFRNAYE-KLNDNGLYITQAGSVYLFTNE--LLDAYRDMGKVFDEVHYFSFPVIGYASPWSFLVGVKGDINF 244
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_BACHD (Spermidine synthase OS=Bacillus halodurans GN=speE PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 5.666e-37 Identity = 76/225 (33.78%), Postives = 130/225 (57.78%), Query Frame = 1 Query: 133 WFEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSF 807 W+ E + + + R LH ++FQ + +++T+ FG +LV+DG + + E DEF+YHE + H PL H NPK V ++GGG+G RE LKH S+E + +ID +V+++ +++L A ++++ V+D + K +DVI D +PV GP +L+ K FY+ I K L ++GIFV Q + H E+ +Y ++++F YTA++P++ Sbjct: 4 WYTEKQTEHFGITAKIKRTLHTEKTDFQQLDVIETEEFGNMLVLDGMVMTTEKDEFVYHEMVAHVPLFTHPNPKHVLVVGGGDGGVIREVLKHPSVEKATLVEIDGKVIEYSKKYLPSIATALNDPRVDVQVDDGFLHIAKAESAYDVIMVDSTEPV--GPAVKLFEKGFYQGIAK-ALKEDGIFVAQT--DNPWFHGELIRKVYADVQEIFPITRLYTANIPTY 223
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_CLOTH (Spermidine synthase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=speE PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 7.400e-37 Identity = 78/225 (34.67%), Postives = 131/225 (58.22%), Query Frame = 1 Query: 133 WFEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSF 807 WF E L + + LH +E+Q++A+++T++FG++L++DG +Q+ DEF+YHE + H PL H+NPK ++GGG+G + RE +KH S+E V+C+ID+ V++ + +L A ++K+ +VV D +++ +FDVI D DP+ GP L+ FY R + L ++GIFV Q F KE+ + I +K +F YT +P++ Sbjct: 4 WFTEYQTPTLGITCKTKKTLHSEKTEYQELAVIETEQFGRMLLLDGIIQTTVADEFVYHEMIAHVPLFTHKNPKKALVVGGGDGGSIREIVKHPSIEKAVLCEIDRRVIEVSKEYLPEISCALDNEKVEVVVGDGIKYVKEHKNEFDVIIIDSTDPI--GPAEGLFAIDFY-RAVYDCLKEDGIFVAQT--ESPFIDKELITRIIRDVKSLFPITRLYTCAIPTY 223
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE1_BACCR (Spermidine synthase 1 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=speE1 PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 7.400e-37 Identity = 81/245 (33.06%), Postives = 139/245 (56.73%), Query Frame = 1 Query: 133 WFEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFAK---TWGMGMASDHPFPIM 858 WF E + +NR LH +EFQ + +++T+ FG +L++DG + + E DEF+YHE + H PL H NP+ V I+GGG+G RE LKH S++ + +ID +V+++ +++L A ++++ + V D + + ++DVI D +PV GP L+TK FY I K L ++GIFV Q FT E+ ++++ +K++F YTA++P++ T+ +G P ++ Sbjct: 4 WFTEKQTKHFGITARINRTLHTEQTEFQKLDMVETEEFGNMLILDGMVMTTEKDEFVYHEMVAHVPLFTHPNPENVLIVGGGDGGVIREVLKHPSVKKATLVEIDGKVIEYSKQYLPSIAGALDNERVEVKVGDGFLHIAESENEYDVIMVDSTEPV--GPAVNLFTKGFYAGISK-ALKEDGIFVAQT-DNPWFT-PELITTVFKDVKEIFPITRLYTANIPTYPSGLWTFTIGSKKHDPLEVI 243
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_YERE8 (Spermidine synthase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=speE PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 9.664e-37 Identity = 83/226 (36.73%), Postives = 130/226 (57.52%), Query Frame = 1 Query: 133 WFEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFLTVNQE-AFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSF 807 W+E + + F++ VL++ +E QD+ + + G+V+ +DG +Q+ E DEFIYHE + H PLL H K V I+GGG+G+ RE +HK++E + M +ID VV+FCR++L + A+ + LV++D + + EKFDVI D DP+ GP L+T +FYE + LN+ GIFV Q G F ++ +N + FK V Y A +P++ Sbjct: 7 WYE-TLHANFGQYFSVENVLYREKTEHQDLVIFENPVLGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGQAKKVLIIGGGDGAMLREVSRHKNIEQITMVEIDAGVVEFCRQYLPNHSAGAYDDPRFKLVIDDGVNFVNQTTEKFDVIISDCTDPI--GPGESLFTSAFYEGCAR-SLNEGGIFVAQNGV--CFLQQDEAVDSHNKLSHYFKDVSFYQAAIPTY 226
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_KLEP7 (Spermidine synthase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=speE PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 9.664e-37 Identity = 83/225 (36.89%), Postives = 129/225 (57.33%), Query Frame = 1 Query: 136 FEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFL-TVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSF 807 + E + D F+++ VL+ ++ QD+ + D + FG+V+ +DG +Q+ E DEFIYHE + H PLL H N K V I+GGG+G+ RE +H+S+E++ M +ID VV FCR++L N A+ + LV++D + + + FDVI D DP+ GP L+T +FYE K LN GIFV Q G F ++ + + F+ V Y A +P++ Sbjct: 7 WHETLHDHFGQYFSVDNVLYHEKTDHQDLIIFDNRAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGNAKHVLIIGGGDGAMLREVSRHRSIETITMVEIDAGVVSFCRQYLPNHNAGAYDDPRFTLVIDDGVNFVNQTTQTFDVIISDCTDPI--GPGESLFTSAFYEG-CKRCLNPGGIFVAQNGV--CFLQQDEAVGSHRKLSHYFRDVSFYQAAIPTY 226
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_PYRCJ (Probable spermidine synthase OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=speE PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 1.262e-36 Identity = 90/242 (37.19%), Postives = 135/242 (55.79%), Query Frame = 1 Query: 178 LNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFL-TVNQEAFCSKKLNLVVNDAKAELE---KRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFAKTWGMGMASDHPFPIMLRKSTTGSRTR 891 +N + S +Q+I + DT+ +G+VL++D +QS+ VDE YHE L+HP + H NP+ V I+GGGEG+ REALKH +++ VM DID++VV+ R +L ++Q AF + +V+ D +E K +K+DVI DL DP QLYT+ F+ +I + LND+G+ VTQAG + F + + + +K F V Y +PSF + S P L S R R Sbjct: 24 INAIHSVKKSPYQEIIIADTEDYGRVLILDDYIQSSYVDEQYYHESLVHPAMATHPNPRDVLILGGGEGATLREALKHGTVKRAVMVDIDRDVVELSRAYLPQMHQGAFDDPRAKVVIQDGFVYVEEAIKAGDKYDVIIMDLTDPYSSDIAKQLYTREFFAKI-RRILNDDGVVVTQAGNSFYFPAE--YDMVLEGVKANFPIVAEYEVWIPSFGYAVNFILGSLRYDPHALTPSEVDERLR 262
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_BACC1 (Spermidine synthase OS=Bacillus cereus (strain ATCC 10987) GN=speE PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 1.262e-36 Identity = 80/244 (32.79%), Postives = 138/244 (56.56%), Query Frame = 1 Query: 133 WFEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFAK---TWGMGMASDHPFPI 855 WF E + +NR LH +EFQ + +++T+ FG +L++DG + + E DEF+YHE + H PL H NP+ V ++GGG+G RE LKH S++ + +ID +V+++ +++L A ++++ + V D + + ++DVI D +PV GP L+TK FY I K L ++GIFV Q FT E+ ++++ +K++F YTA++P++ T+ +G P + Sbjct: 4 WFTEKQTKHFGITARINRTLHTEQTEFQKLDMVETEEFGNMLILDGMVMTTEKDEFVYHEMVAHVPLFTHPNPENVLVVGGGDGGVIREVLKHPSVKKATLVEIDGKVIEYSKQYLPSIAGALDNERVEVKVGDGFLHIAESENEYDVIMVDSTEPV--GPAVNLFTKGFYAGISK-ALKEDGIFVAQT-DNPWFT-PELITTVFKDVKEIFPITRLYTANIPTYPSGLWTFTIGSKKHDPLEV 242
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE1_BACAN (Spermidine synthase 1 OS=Bacillus anthracis GN=speE1 PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 1.262e-36 Identity = 80/244 (32.79%), Postives = 138/244 (56.56%), Query Frame = 1 Query: 133 WFEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFAK---TWGMGMASDHPFPI 855 WF E + +NR LH +EFQ + +++T+ FG +L++DG + + E DEF+YHE + H PL H NP+ V ++GGG+G RE LKH S++ + +ID +V+++ +++L A ++++ + V D + + ++DVI D +PV GP L+TK FY I K L ++GIFV Q FT E+ ++++ +K++F YTA++P++ T+ +G P + Sbjct: 4 WFTEKQTKHFGITARINRTLHTEQTEFQKLDMVETEEFGNMLILDGMVMTTEKDEFVYHEMVAHVPLFTHPNPENVLVVGGGDGGVIREVLKHPSVKKATLVEIDGKVIEYSKQYLPSIAGALDNERVEVKVGDGFLHIAESENEYDVIMVDSTEPV--GPAVNLFTKGFYAGISK-ALKEDGIFVAQT-DNPWFT-PELITTVFKDVKEIFPITRLYTANIPTYPSGLWTFTIGSKKHDPLEV 242 The following BLAST results are available for this feature:
BLAST of DY305575 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 220
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY305575 ID=DY305575; Name=DY305575; organism=Citrus sinensis; type=EST; length=1251bpback to top |