DY305575
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_XANOP (Spermidine synthase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=speE PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.018e-22 Identity = 61/177 (34.46%), Postives = 91/177 (51.41%), Query Frame = 1 Query: 172 FALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK-RNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 699 F ++ L + S FQ I + T +GK+++IDG + D F YHE + HP L H PK V I+GGG+ RE LKH +ES CDID++V ++ ++ + L+ +D A + D++ D DPV GP L+ K+FYE K L D+G+ V Q+ Sbjct: 21 FRISGKLDEVQSLFQKIEIYQTTDWGKLMLIDGAVMLTSRDNFFYHEMISHPALFTHPTPKRVVIIGGGDCGTLREVLKHPGVESATQCDIDEQVTRMSEKYFPELCDSNHDARAELLFDDGVAYMANCPAGSVDIVIVDSTDPV--GPAEGLFNKAFYESCFK-ALKDDGLLVQQS 194
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_XANOM (Spermidine synthase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=speE PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.018e-22 Identity = 61/177 (34.46%), Postives = 91/177 (51.41%), Query Frame = 1 Query: 172 FALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK-RNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 699 F ++ L + S FQ I + T +GK+++IDG + D F YHE + HP L H PK V I+GGG+ RE LKH +ES CDID++V ++ ++ + L+ +D A + D++ D DPV GP L+ K+FYE K L D+G+ V Q+ Sbjct: 21 FRISGKLDEVQSLFQKIEIYQTTDWGKLMLIDGAVMLTSRDNFFYHEMISHPALFTHPTPKRVVIIGGGDCGTLREVLKHPGVESATQCDIDEQVTRMSEKYFPELCDSNHDARAELLFDDGVAYMANCPAGSVDIVIVDSTDPV--GPAEGLFNKAFYESCFK-ALKDDGLLVQQS 194
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_PROM3 (Spermidine synthase OS=Prochlorococcus marinus (strain MIT 9303) GN=speE PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 3.942e-22 Identity = 69/217 (31.80%), Postives = 114/217 (52.53%), Query Frame = 1 Query: 184 RVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFL-TVNQEAFCSKKLNLVVNDAKA-ELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYE---RILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFAKTW 819 RVL S +Q I ++D+ R+GK L++DG +AE E YHE L+HP L + V ++GGG+G ARE L+++ ++ + M +ID VV+ ++ L ++ A+ +L L + D A + +DVI D +DP GP L+ ++F++ RIL+P G+F TQ+ F +++ I+QVF + VP + W Sbjct: 26 RVLVDEKSPYQRITVIDSSRYGKGLLLDGCWMTAEHQERHYHESLVHPALCSAAQLERVLVIGGGDGGTARECLRYQDVKHLDMVEIDGRVVELSQKHLPSIGGHAWSDARLQLNLEDGIAWTANATDSSYDVILVDGSDPT--GPAEGLFNEAFFKQCRRILRP----GGVFATQSESPEAF--RQIHIDTVRLIRQVFGYADPLYGWVPMYPSGW 234
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_STRMK (Spermidine synthase OS=Stenotrophomonas maltophilia (strain K279a) GN=speE PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 8.782e-22 Identity = 62/166 (37.35%), Postives = 85/166 (51.20%), Query Frame = 1 Query: 205 SEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK-RNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 699 S FQ I + T +G ++ IDG + D F YHE + HP L H PK V I+GGG+ RE LKH +ESV CDID++V R+ ++ + L+ +D A + DV+ D DPV GP L+ K+FYE K L D+GI V Q+ Sbjct: 32 SPFQKIEIFQTTDWGNLMTIDGAIMLTSKDNFFYHEMISHPVLFTHAAPKRVVIIGGGDCGTLREVLKHTGVESVTQCDIDEQVTVMARKHFPELCDSNDDARAELLFDDGVAYMANCPAGSVDVVIVDSTDPV--GPGEGLFNKAFYESCFK-ALKDDGILVQQS 194
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_XYLFA (Spermidine synthase OS=Xylella fastidiosa GN=speE PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.498e-21 Identity = 61/177 (34.46%), Postives = 90/177 (50.85%), Query Frame = 1 Query: 172 FALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAEL-EKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 699 F + L + S FQ I + ++ +GK++VIDG + D F+YHE + HP L H PK V I+GGG+ RE LKH +E V CDID++V + + + L+ +D A + + DVI D DPV GP L+ ++FYE + ND G+ V Q+ Sbjct: 21 FRITGKLDEVQSPFQKIEIYNSTDWGKLMVIDGALMLTSRDNFLYHEMISHPALFTHTAPKCVVIIGGGDCGTLREVLKHPDIEQVTQCDIDEQVTRMAEKHFPELCTSNNDPRATLLFSDGVAYMTDCPTNSVDVIIVDSTDPV--GPAKGLFNRTFYESCFRALKND-GLLVQQS 194
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_STRM5 (Spermidine synthase OS=Stenotrophomonas maltophilia (strain R551-3) GN=speE PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.498e-21 Identity = 62/166 (37.35%), Postives = 85/166 (51.20%), Query Frame = 1 Query: 205 SEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK-RNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 699 S FQ I + T +G ++ IDG + D F YHE + HP L H PK V I+GGG+ RE LKHK +ESV CDID++V R+ ++ + L+ +D A + DV+ D DPV GP L+ K+FY K L D+GI V Q+ Sbjct: 32 SPFQKIEIFRTTDWGNLMTIDGAIMLTSKDNFFYHEMISHPVLFTHAAPKRVVIIGGGDCGTLREVLKHKGVESVTQCDIDEQVTVMARKHFPELCDSNDDARAELLFDDGVAYMANCPAGSVDVVIVDSTDPV--GPGEGLFNKAFYASCFK-ALKDDGILVQQS 194
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_XYLFM (Spermidine synthase OS=Xylella fastidiosa (strain M12) GN=speE PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.956e-21 Identity = 60/177 (33.90%), Postives = 90/177 (50.85%), Query Frame = 1 Query: 172 FALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAEL-EKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 699 F + L + S FQ I + ++ +GK++VIDG + D FIYHE + HP L H PK V I+GGG+ RE LKH +E V CDID++V + + + L+ +D A + + DVI D DP+ GP L+ ++FYE + ND G+ + Q+ Sbjct: 21 FRVTGKLDEVQSPFQKIEIYNSTDWGKLMVIDGALMLTSRDNFIYHEMISHPALFTHTAPKCVVIIGGGDCGTLREVLKHPDIEQVTQCDIDEQVTRMAEKHFPELCTSNNDPRATLLFSDGVAYMADCPTNSVDVIIVDSTDPI--GPAKGLFNRTFYESCFRALKND-GLLIQQS 194
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_XYLFT (Spermidine synthase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=speE PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 2.555e-21 Identity = 60/177 (33.90%), Postives = 90/177 (50.85%), Query Frame = 1 Query: 172 FALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAEL-EKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 699 F + L + S FQ I + ++ +GK++VIDG + D F+YHE + HP L H PK V I+GGG+ RE LKH +E V CDID++V + + + L+ +D A + + DVI D DPV GP L+ ++FYE + ND G+ + Q+ Sbjct: 21 FRVTGKLDEVQSPFQKIEIYNSTDWGKLMVIDGALMLTSRDNFLYHEMISHPALFTHTAPKCVVIIGGGDCGTLREVLKHPDIEQVTQCDIDEQVTRMAEKHFPELCTSNNDPRATLLFSDGVAYMADCPTNSVDVIIVDSTDPV--GPAKGLFNRTFYESCFRALKND-GLLIQQS 194
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_XYLF2 (Spermidine synthase OS=Xylella fastidiosa (strain M23) GN=speE PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 2.555e-21 Identity = 60/177 (33.90%), Postives = 90/177 (50.85%), Query Frame = 1 Query: 172 FALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAEL-EKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 699 F + L + S FQ I + ++ +GK++VIDG + D F+YHE + HP L H PK V I+GGG+ RE LKH +E V CDID++V + + + L+ +D A + + DVI D DPV GP L+ ++FYE + ND G+ + Q+ Sbjct: 21 FRVTGKLDEVQSPFQKIEIYNSTDWGKLMVIDGALMLTSRDNFLYHEMISHPALFTHTAPKCVVIIGGGDCGTLREVLKHPDIEQVTQCDIDEQVTRMAEKHFPELCTSNNDPRATLLFSDGVAYMADCPTNSVDVIIVDSTDPV--GPAKGLFNRTFYESCFRALKND-GLLIQQS 194
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_NITOC (Spermidine synthase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=speE PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.402e-19 Identity = 62/191 (32.46%), Postives = 94/191 (49.21%), Query Frame = 1 Query: 133 WFEEVIDDD-LKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDA-KAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 699 WF EV + L +S A+ LH T+ +Q I + T+ FG+++VIDG + + D F YHE + HP L H +P+ V I+GGG+ RE LKH +E V +ID+ V ++ ++ + + D + E DVI D DP+ G L+ SFY + L + GI V Q+ Sbjct: 8 WFTEVCKEGGLAFSLAIREKLHAETTPYQYIEIYQTETFGRLMVIDGFIMLSGRDNFFYHEMMAHPVLFTHPHPQRVLIIGGGDCGTLREVLKHDVVEKVQQVEIDERVTRLAEKYFPELCQSNDDPRAHFHFGDGLRFVAEAPANSVDVIIIDSTDPI--GSAEGLFQASFYADCQR-LLGEKGILVHQS 195 The following BLAST results are available for this feature:
BLAST of DY305575 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 220
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305575 ID=DY305575; Name=DY305575; organism=Citrus sinensis; type=EST; length=1251bpback to top |