DY305575
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE1_STRCO (Probable spermidine synthase 1 OS=Streptomyces coelicolor GN=speE1 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 3.123e-19 Identity = 66/224 (29.46%), Postives = 108/224 (48.21%), Query Frame = 1 Query: 187 VLHKGTSEFQDIALLDTKRFGKV----LVIDGKMQSAEVDEFIYHECLIHPPLLC-HQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRF---LTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFAKTWGMGMA 834 ++H T+++QDI + + F L ++G +Q + VDE+ YHE L+HP L H N V IMGGG+G A RE L+H+ + V + ++D + R F +NQ + + +V DA L + +++D + D DP + +LY+ FY+ + + D + V P F + + SI TI+ + VPSF WG +A Sbjct: 254 IIHSETTQYQDIVVTRSTAFTGEPDVRLFLNGDLQFSSVDEYRYHESLVHPALSGPHSN---VLIMGGGDGLALREVLRHEGVRHVTLVELDPAMTRLARTFEPLRKLNQGSLDDPRAKVVNADAFTWLREARQQYDAVIIDFPDP-DSASLAKLYSVEFYDLLRRVLAPDGQVMVQSGSP---FFAPKTYWSIAKTIETAGYATTEFQIDVPSFG-NWGFVLA 469
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_RHOBA (Probable spermidine synthase OS=Rhodopirellula baltica GN=speE PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 3.453e-18 Identity = 62/220 (28.18%), Postives = 110/220 (50.00%), Query Frame = 1 Query: 184 RVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRF---LTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFAKTWGMGMA 834 R+++ TS +Q IA+ ++ G L ++G +Q VDE+ YHE L+HP + ++ + V ++GGG+G A RE L++ +ESV + D+D + +F +N + ++ +V DA + + +E+FD + D DP +LY+ FY + + D G+ + P + + I T++ V Y A VP+F WG +A Sbjct: 231 RIVYADTSPYQRIAVTRNEK-GFQLYLNGHLQFNSVDEYRYHEALVHPVMSVCKDARRVLVLGGGDGLAVREILRYDHVESVTLVDLDPAMTRLATQFEPLAELNGRSLERDRVTVVHRDAFLWVGEGDEQFDAVVIDFPDP-GNYSIGKLYSSRFYNLLRERMTEDAGLAIQCTSP---LVAPKSYWCILRTMQASGFDVTPYHAPVPTFG-IWGFALA 444
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE2_RALSO (Probable spermidine synthase 2 OS=Ralstonia solanacearum GN=speE2 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 7.693e-18 Identity = 66/222 (29.73%), Postives = 110/222 (49.55%), Query Frame = 1 Query: 181 NRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDF---CRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFAKTWGMGMAS 837 + ++H +S +Q + + K + L I+G +Q + DE+ YHE L+ P L + + V ++GGG+G A R+ LK+ +E V + D+D + + +NQ AF ++ +V DA L+ + FDV D DP +LY+ FY R+L + D G+ V QA T + + + T+K+ Y A VPSF + WG +A+ Sbjct: 248 DEIIHAISSPYQRLVVTRWKDDLR-LYINGNLQFSSRDEYRYHEALVLPALESVRGARRVLVLGGGDGLALRQILKYPQVEHVTLVDLDPRMTSLFSHAEALVALNQHAFSDPRVTVVNADAGQWLQTAADMFDVAIVDFPDP-SNFSIGKLYSVPFY-RLLSRHVADTGLVVIQA--TSPYFAPRSYWCVDATLKEAGYRTWPYHALVPSFGE-WGFILAA 463
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE1_RALSO (Probable spermidine synthase 1 OS=Ralstonia solanacearum GN=speE1 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 7.693e-18 Identity = 66/222 (29.73%), Postives = 110/222 (49.55%), Query Frame = 1 Query: 181 NRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDF---CRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFAKTWGMGMAS 837 + ++H +S +Q + + K + L I+G +Q + DE+ YHE L+ P L + + V ++GGG+G A R+ LK+ +E V + D+D + + +NQ AF ++ +V DA L+ + FDV D DP +LY+ FY R+L + D G+ V QA T + + + T+K+ Y A VPSF + WG +A+ Sbjct: 233 DEIIHAISSPYQRLVVTRWKDDLR-LYINGNLQFSSRDEYRYHEALVLPALESVRGARRVLVLGGGDGLALRQILKYPQVEHVTLVDLDPRMTSLFSHAEALVALNQHAFSDPRVTVVNADAGQWLQTAADMFDVAIVDFPDP-SNFSIGKLYSVPFY-RLLSRHVADTGLVVIQA--TSPYFAPRSYWCVDATLKEAGYRTWPYHALVPSFGE-WGFILAA 448
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_MYCTU (Probable spermidine synthase OS=Mycobacterium tuberculosis GN=speE PE=3 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 1.451e-16 Identity = 66/215 (30.70%), Postives = 110/215 (51.16%), Query Frame = 1 Query: 205 SEFQDIALLDTKRFGKV-LVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFL-TVNQEAFCSKKLNLVVNDAKAELEKR---NEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFAKTWGMGMA 834 S +Q+I + T+R + L +DG +Q DE+ Y E L++P + ++V ++GGG+G AARE L+ +E +V ++D V++ R L VN + + ++++V++DA + L FD + DL DP + +LY+ FY + L G+ V QAG ++ F I +TI+ V Y HVP+F WG +A Sbjct: 258 SAYQEIVV--TRRGDDLRLYLDGGLQFCTRDEYRYTESLVYPAV--SDGARSVLVLGGGDGLAARELLRQPGIEQIVQVELDPAVIELARTTLRDVNAGSLDNPRVHVVIDDAMSWLRGAAVPPAGFDAVIVDLRDP-DTPVLGRLYSTEFY-ALAARALAPGGLMVVQAGSP--YSTPTAFWRIISTIRSAGYAVTPYHVHVPTFG-DWGFALA 463
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_MYCBO (Probable spermidine synthase OS=Mycobacterium bovis GN=speE PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.451e-16 Identity = 66/215 (30.70%), Postives = 110/215 (51.16%), Query Frame = 1 Query: 205 SEFQDIALLDTKRFGKV-LVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFL-TVNQEAFCSKKLNLVVNDAKAELEKR---NEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFAKTWGMGMA 834 S +Q+I + T+R + L +DG +Q DE+ Y E L++P + ++V ++GGG+G AARE L+ +E +V ++D V++ R L VN + + ++++V++DA + L FD + DL DP + +LY+ FY + L G+ V QAG ++ F I +TI+ V Y HVP+F WG +A Sbjct: 258 SAYQEIVV--TRRGDDLRLYLDGGLQFCTRDEYRYTESLVYPAV--SDGARSVLVLGGGDGLAARELLRQPGIEQIVQVELDPAVIELARTTLRDVNAGSLDNPRVHVVIDDAMSWLRGAAVPPAGFDAVIVDLRDP-DTPVLGRLYSTEFY-ALAARALAPGGLMVVQAGSP--YSTPTAFWRIISTIRSAGYAVTPYHVHVPTFG-DWGFALA 463
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_COREF (Probable spermidine synthase OS=Corynebacterium efficiens GN=speE PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 4.221e-16 Identity = 70/238 (29.41%), Postives = 116/238 (48.74%), Query Frame = 1 Query: 187 VLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFLTV-NQEAFCSKKLNLVVNDAKAELE---KRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQV-FKHVVAYTAHVPSFAKTWGMGMASDHPFPIMLRKSTTGSR 885 V++ S++QDI + + + L ++G +Q + DE Y E L++P L + +T I+GGG+G AARE L+ + + ++D EV++ L N A ++ ++ +DA L +++D IF DL DP +LY++ FY L +LND G V Q+ + +T +VF I +T+ V+ Y HVP+F WG + + LR T R Sbjct: 246 VIYAHQSDYQDIVVTQ-RGADRRLYLNGGLQYSTRDEHRYTESLVYPGL--SDSARTALIIGGGDGLAARELLRFPDMR-ITQVELDPEVIEVANTILLPDNGGAMQDPRVTVITDDAFTWLRAGGDGGQRYDAIFVDLPDP-NNDTMARLYSQEFYTLAL-ARLNDGGRMVVQS--SSAYTTPDVFWRIASTMSAAGCGAVIPYHVHVPTFG-DWGFQLCGPEGTELGLRGDTPSLR 474
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_SHEON (Probable spermidine synthase OS=Shewanella oneidensis GN=speE PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 9.404e-16 Identity = 63/239 (26.36%), Postives = 113/239 (47.28%), Query Frame = 1 Query: 181 NRVLHKGTSEFQDIALLDTKRFGKV-----LVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVD------------FCRRFLTVNQEAFCSKKLNLVVNDAKAELEK---RNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFAKTWGMGMAS 837 ++V++ + FQ + + R + L I+G++Q + DE IYH L+HP L V I+GGG+G ++ L+ + E V + D+D +V + L++N AF ++ ++ +DA ++K + +K+D I DL DP +LY+ FY ++ + ND + V P + ++ F S+ T+ V Y +VPSF + WG +A+ Sbjct: 270 DKVVYAKATRFQQLTFTERLRGNGLSPVYALYINGRLQFSSSDEHIYHAFLVHPTLAASARHNKVLIIGGGDGLGLKQVLRWEP-EQVTLLDLDAALVQLFKSPDPDMPERLSQALLSLNGNAFNDPRVTVIHDDAFNGVDKLIAKGDKYDAIIVDLPDP-SHPDLNKLYSDYFYRKLKELISNDGALTVQSTSP---YHAQKAFISVAKTLALAGFDVKQYHHNVPSFGE-WGWSIAT 502
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_STRAW (Probable spermidine synthase OS=Streptomyces avermitilis GN=speE PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.025e-14 Identity = 54/183 (29.51%), Postives = 93/183 (50.82%), Query Frame = 1 Query: 256 LVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRR---FLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFY---ERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAY 786 L +DG+++ + DE YHE L+HP + ++ + V ++GGG+G AARE L++ + V + ++D VV RR ++N A+ ++++V DA L +DV+ DL DP +LY++ FY R+L P G V AGP + + + ++ T++ V Y Sbjct: 292 LFLDGRLRVSGHDERRYHEALVHPAMSDGRHAR-VLVLGGGDGLAAREVLRYADVARVDVVELDAGVVRLARRDPALSSLNAHAYDDPRVHVVTADAFCRLRHTRSAYDVVISDLPDPGITAST-KLYSQEFYGLVSRVLAP----GGRLVVHAGP--VASRPRAYWTVEATVRAAGLRTVPY 466
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE2_STRCO (Probable spermidine synthase 2 OS=Streptomyces coelicolor GN=speE2 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.076e-11 Identity = 54/182 (29.67%), Postives = 88/182 (48.35%), Query Frame = 1 Query: 256 LVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKT-VFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRR---FLTVNQEAFCSKKLNLVVNDAKAELEKR-NEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAY 786 L +DG+++ DE YHE L+HP + P V I+GGG+G AARE L+H + V + + D + R T+N+ A+ ++ ++ DA L + +DV+ DL DP +LY++ FY +L+ L +G AGP + F ++ T++ VAY Sbjct: 296 LFLDGRLRVRGSDERSYHEALVHPAM---GGPHARVLILGGGDGLAAREVLRHPGVRRVDVLEADPGLARLARHDPGLSTLNEHAYGDARVRVLSGDAFHRLRATPSATYDVVISDLPDPGVTAST-KLYSQEFY-GLLRRVLAPDGRLAVHAGP--VDARPRAFWTVDATLRAAGLPAVAY 470 The following BLAST results are available for this feature:
BLAST of DY305575 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 220
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY305575 ID=DY305575; Name=DY305575; organism=Citrus sinensis; type=EST; length=1251bpback to top |