DY305575
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_SHIBS (Spermidine synthase OS=Shigella boydii serotype 4 (strain Sb227) GN=speE PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 1.649e-36 Identity = 83/225 (36.89%), Postives = 130/225 (57.78%), Query Frame = 1 Query: 136 FEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFL-TVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSF 807 + E + D FA++ VL+ ++ QD+ + + FG+V+ +DG +Q+ E DEFIYHE + H PLL H + K V I+GGG+G+ RE +HK++ES+ M +ID VV FCR++L N +++ + LV++D + + ++ FDVI D DP+ GP L+T +FYE K LN +GIFV Q G F +E + + F V Y A +P++ Sbjct: 7 WHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNADSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPI--GPGESLFTSAFYEG-CKRCLNPSGIFVAQNGV--CFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTY 226
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_PYRAB (Probable spermidine synthase OS=Pyrococcus abyssi GN=speE PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 1.649e-36 Identity = 86/236 (36.44%), Postives = 135/236 (57.20%), Query Frame = 1 Query: 169 SFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFLTVN-------QEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFAKTWG--MGMASDHPF 849 +F + + +G S+FQ I + +T+ FG++L +DG +Q E YHE L+HP +L H NP+ V ++GGG+G RE L+H+ +E +M +ID+EV++ +F+ ++ + C K+ L++ D E K N FDV+ D DPV GP L+++ FYER + LND GI+VTQAG +FT + V + Y + +VF V AY+ V +A W +G+ D F Sbjct: 14 AFKVKEKIFEGHSKFQKIEVYETEGFGRLLALDGTVQLVTEGEESYHESLVHPVMLAHPNPRRVLVIGGGDGGTIREVLRHEEVEEAIMVEIDEEVIEVAIKFIGIDGGLLDKMMKGEC-KRAKLIIGDG-VEFIKENSGFDVVIVDSTDPV--GPAKMLFSREFYERAYE-ALNDPGIYVTQAGSVYLFTDELV--TAYENMSRVFDKVYAYSFPVIGYASPWAFLVGIKGDLDF 242
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_ECOUT (Spermidine synthase OS=Escherichia coli (strain UTI89 / UPEC) GN=speE PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 1.649e-36 Identity = 84/225 (37.33%), Postives = 128/225 (56.89%), Query Frame = 1 Query: 136 FEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFL-TVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSF 807 + E + D FA++ VL+ ++ QD+ + + FG+V+ +DG +Q+ E DEFIYHE + H PLL H + K V I+GGG+G+ RE +HK++ES+ M +ID VV FCR++L N ++ + LV++D + + N+ FDVI D DP+ GP L+T +FYE K LN GIFV Q G F +E + + F V Y A +P++ Sbjct: 7 WHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTNQTFDVIISDCTDPI--GPGESLFTSAFYEG-CKRCLNPGGIFVAQNGV--CFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTY 226
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_ECOK1 (Spermidine synthase OS=Escherichia coli O1:K1 / APEC GN=speE PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 1.649e-36 Identity = 84/225 (37.33%), Postives = 128/225 (56.89%), Query Frame = 1 Query: 136 FEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFL-TVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSF 807 + E + D FA++ VL+ ++ QD+ + + FG+V+ +DG +Q+ E DEFIYHE + H PLL H + K V I+GGG+G+ RE +HK++ES+ M +ID VV FCR++L N ++ + LV++D + + N+ FDVI D DP+ GP L+T +FYE K LN GIFV Q G F +E + + F V Y A +P++ Sbjct: 7 WHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTNQTFDVIISDCTDPI--GPGESLFTSAFYEG-CKRCLNPGGIFVAQNGV--CFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTY 226
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_ECO45 (Spermidine synthase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=speE PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 1.649e-36 Identity = 84/225 (37.33%), Postives = 128/225 (56.89%), Query Frame = 1 Query: 136 FEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFL-TVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSF 807 + E + D FA++ VL+ ++ QD+ + + FG+V+ +DG +Q+ E DEFIYHE + H PLL H + K V I+GGG+G+ RE +HK++ES+ M +ID VV FCR++L N ++ + LV++D + + N+ FDVI D DP+ GP L+T +FYE K LN GIFV Q G F +E + + F V Y A +P++ Sbjct: 7 WHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTNQTFDVIISDCTDPI--GPGESLFTSAFYEG-CKRCLNPGGIFVAQNGV--CFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTY 226
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_ECO27 (Spermidine synthase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=speE PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 1.649e-36 Identity = 84/225 (37.33%), Postives = 128/225 (56.89%), Query Frame = 1 Query: 136 FEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFL-TVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSF 807 + E + D FA++ VL+ ++ QD+ + + FG+V+ +DG +Q+ E DEFIYHE + H PLL H + K V I+GGG+G+ RE +HK++ES+ M +ID VV FCR++L N ++ + LV++D + + N+ FDVI D DP+ GP L+T +FYE K LN GIFV Q G F +E + + F V Y A +P++ Sbjct: 7 WHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTNQTFDVIISDCTDPI--GPGESLFTSAFYEG-CKRCLNPGGIFVAQNGV--CFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTY 226
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_BACWK (Spermidine synthase OS=Bacillus weihenstephanensis (strain KBAB4) GN=speE PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 1.649e-36 Identity = 80/244 (32.79%), Postives = 137/244 (56.15%), Query Frame = 1 Query: 133 WFEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFAK---TWGMGMASDHPFPI 855 WF E + +NR LH +EFQ + +++T+ FG +L++DG + + E DEF+YHE + H PL H NP+ V ++GGG+G RE LKH S++ + +ID +V+++ +++L A +++ + V D + + ++DVI D +PV GP L+TK FY I K L ++GIFV Q FT E+ ++++ +K++F YTA++P++ T+ +G P + Sbjct: 4 WFTEKQTKHFGITARINRTLHTEQTEFQKLDMVETEEFGNMLILDGMVMTTEKDEFVYHEMVAHVPLFTHPNPENVLVVGGGDGGVIREVLKHPSVKKATLVEIDGKVIEYSKQYLPSIAGALDDERVEVKVGDGFLHIAESENEYDVIMVDSTEPV--GPAVNLFTKGFYAGISK-ALKEDGIFVAQT-DNPWFT-PELITTVFKDVKEIFPITRLYTANIPTYPSGLWTFTIGSKKHDPLEV 242
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_SHISS (Spermidine synthase OS=Shigella sonnei (strain Ss046) GN=speE PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 2.153e-36 Identity = 83/225 (36.89%), Postives = 128/225 (56.89%), Query Frame = 1 Query: 136 FEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFL-TVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSF 807 + E + D FA++ VL+ ++ QD+ + + FG+V+ +DG +Q+ E DEFIYHE + H PLL H + K V I+GGG+G+ RE +HK++ES+ M +ID +V FCR++L N ++ + LV++D + + ++ FDVI D DP+ GP L+T +FYE K LN GIFV Q G F +E Y + F V Y A +P++ Sbjct: 7 WHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGIVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPI--GPGESLFTSAFYEG-CKRCLNPGGIFVAQNGV--CFLQQEEAIDSYRKLSHYFSDVGFYQAAIPTY 226
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_YERPY (Spermidine synthase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=speE PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 2.812e-36 Identity = 82/226 (36.28%), Postives = 129/226 (57.08%), Query Frame = 1 Query: 133 WFEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFLTVNQE-AFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSF 807 W+E + + F++ VL++ +E QD+ + + G+V+ +DG +Q+ E DEFIYHE + H PLL H K V I+GGG+G+ RE +HK++E + M +ID VV+FCR++L + A+ + LV++D + + EKFDVI D DP+ GP L+T FYE + LN+ GIFV Q G F ++ + +N + F V Y A +P++ Sbjct: 7 WYE-TLHANFGQYFSVENVLYREKTEHQDLVIFENPELGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGQAKKVLIIGGGDGAMLREVSRHKNIEQITMVEIDAGVVEFCRQYLPNHSAGAYDDPRFKLVIDDGVNFVNQTTEKFDVIISDCTDPI--GPGESLFTSVFYEGCAR-SLNEGGIFVAQNGV--CFLQQDEAVNSHNKLSHYFSDVSFYQAAIPTY 226
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_YERPS (Spermidine synthase OS=Yersinia pseudotuberculosis GN=speE PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 2.812e-36 Identity = 82/226 (36.28%), Postives = 129/226 (57.08%), Query Frame = 1 Query: 133 WFEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFLTVNQE-AFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSF 807 W+E + + F++ VL++ +E QD+ + + G+V+ +DG +Q+ E DEFIYHE + H PLL H K V I+GGG+G+ RE +HK++E + M +ID VV+FCR++L + A+ + LV++D + + EKFDVI D DP+ GP L+T FYE + LN+ GIFV Q G F ++ + +N + F V Y A +P++ Sbjct: 7 WYE-TLHANFGQYFSVENVLYREKTEHQDLVIFENPELGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGQAKKVLIIGGGDGAMLREVSRHKNIEQITMVEIDAGVVEFCRQYLPNHSAGAYDDPRFKLVIDDGVNFVNQTTEKFDVIISDCTDPI--GPGESLFTSVFYEGCAR-SLNEGGIFVAQNGV--CFLQQDEAVNSHNKLSHYFSDVSFYQAAIPTY 226 The following BLAST results are available for this feature:
BLAST of DY305575 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 220
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY305575 ID=DY305575; Name=DY305575; organism=Citrus sinensis; type=EST; length=1251bpback to top |