DY305575
|
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_ECOL5 (Spermidine synthase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=speE PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 6.264e-36 Identity = 83/225 (36.89%), Postives = 128/225 (56.89%), Query Frame = 1
Query: 136 FEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFL-TVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSF 807
+ E + D FA++ VL+ ++ QD+ + + FG+V+ +DG +Q+ E DEFIYHE + H PLL H + K V I+GGG+G+ RE +HK++ES+ M +ID VV FCR++L N ++ + LV++D + + ++ FDVI D DP+ GP L+T +FYE K LN GIFV Q G F +E + + F V Y A +P++
Sbjct: 7 WHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPI--GPGESLFTSAFYEG-CKRCLNPGGIFVAQNGV--CFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTY 226
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_ECOHS (Spermidine synthase OS=Escherichia coli O9:H4 (strain HS) GN=speE PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 6.264e-36 Identity = 83/225 (36.89%), Postives = 128/225 (56.89%), Query Frame = 1
Query: 136 FEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFL-TVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSF 807
+ E + D FA++ VL+ ++ QD+ + + FG+V+ +DG +Q+ E DEFIYHE + H PLL H + K V I+GGG+G+ RE +HK++ES+ M +ID VV FCR++L N ++ + LV++D + + ++ FDVI D DP+ GP L+T +FYE K LN GIFV Q G F +E + + F V Y A +P++
Sbjct: 7 WHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPI--GPGESLFTSAFYEG-CKRCLNPGGIFVAQNGV--CFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTY 226
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_ECODH (Spermidine synthase OS=Escherichia coli (strain K12 / DH10B) GN=speE PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 6.264e-36 Identity = 83/225 (36.89%), Postives = 128/225 (56.89%), Query Frame = 1
Query: 136 FEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFL-TVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSF 807
+ E + D FA++ VL+ ++ QD+ + + FG+V+ +DG +Q+ E DEFIYHE + H PLL H + K V I+GGG+G+ RE +HK++ES+ M +ID VV FCR++L N ++ + LV++D + + ++ FDVI D DP+ GP L+T +FYE K LN GIFV Q G F +E + + F V Y A +P++
Sbjct: 7 WHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPI--GPGESLFTSAFYEG-CKRCLNPGGIFVAQNGV--CFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTY 226
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_ECOBW (Spermidine synthase OS=Escherichia coli (strain K12 / BW2952) GN=speE PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 6.264e-36 Identity = 83/225 (36.89%), Postives = 128/225 (56.89%), Query Frame = 1
Query: 136 FEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFL-TVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSF 807
+ E + D FA++ VL+ ++ QD+ + + FG+V+ +DG +Q+ E DEFIYHE + H PLL H + K V I+GGG+G+ RE +HK++ES+ M +ID VV FCR++L N ++ + LV++D + + ++ FDVI D DP+ GP L+T +FYE K LN GIFV Q G F +E + + F V Y A +P++
Sbjct: 7 WHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPI--GPGESLFTSAFYEG-CKRCLNPGGIFVAQNGV--CFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTY 226
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_ECO8A (Spermidine synthase OS=Escherichia coli O8 (strain IAI1) GN=speE PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 6.264e-36 Identity = 83/225 (36.89%), Postives = 128/225 (56.89%), Query Frame = 1
Query: 136 FEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFL-TVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSF 807
+ E + D FA++ VL+ ++ QD+ + + FG+V+ +DG +Q+ E DEFIYHE + H PLL H + K V I+GGG+G+ RE +HK++ES+ M +ID VV FCR++L N ++ + LV++D + + ++ FDVI D DP+ GP L+T +FYE K LN GIFV Q G F +E + + F V Y A +P++
Sbjct: 7 WHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPI--GPGESLFTSAFYEG-CKRCLNPGGIFVAQNGV--CFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTY 226
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_ECO7I (Spermidine synthase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=speE PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 6.264e-36 Identity = 83/225 (36.89%), Postives = 128/225 (56.89%), Query Frame = 1
Query: 136 FEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFL-TVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSF 807
+ E + D FA++ VL+ ++ QD+ + + FG+V+ +DG +Q+ E DEFIYHE + H PLL H + K V I+GGG+G+ RE +HK++ES+ M +ID VV FCR++L N ++ + LV++D + + ++ FDVI D DP+ GP L+T +FYE K LN GIFV Q G F +E + + F V Y A +P++
Sbjct: 7 WHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPI--GPGESLFTSAFYEG-CKRCLNPGGIFVAQNGV--CFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTY 226
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_ECO5E (Spermidine synthase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=speE PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 6.264e-36 Identity = 83/225 (36.89%), Postives = 128/225 (56.89%), Query Frame = 1
Query: 136 FEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFL-TVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSF 807
+ E + D FA++ VL+ ++ QD+ + + FG+V+ +DG +Q+ E DEFIYHE + H PLL H + K V I+GGG+G+ RE +HK++ES+ M +ID VV FCR++L N ++ + LV++D + + ++ FDVI D DP+ GP L+T +FYE K LN GIFV Q G F +E + + F V Y A +P++
Sbjct: 7 WHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPI--GPGESLFTSAFYEG-CKRCLNPGGIFVAQNGV--CFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTY 226
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_ECO57 (Spermidine synthase OS=Escherichia coli O157:H7 GN=speE PE=3 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 6.264e-36 Identity = 83/225 (36.89%), Postives = 128/225 (56.89%), Query Frame = 1
Query: 136 FEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFL-TVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSF 807
+ E + D FA++ VL+ ++ QD+ + + FG+V+ +DG +Q+ E DEFIYHE + H PLL H + K V I+GGG+G+ RE +HK++ES+ M +ID VV FCR++L N ++ + LV++D + + ++ FDVI D DP+ GP L+T +FYE K LN GIFV Q G F +E + + F V Y A +P++
Sbjct: 7 WHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPI--GPGESLFTSAFYEG-CKRCLNPGGIFVAQNGV--CFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTY 226
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_ECO55 (Spermidine synthase OS=Escherichia coli (strain 55989 / EAEC) GN=speE PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 6.264e-36 Identity = 83/225 (36.89%), Postives = 128/225 (56.89%), Query Frame = 1
Query: 136 FEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFL-TVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSF 807
+ E + D FA++ VL+ ++ QD+ + + FG+V+ +DG +Q+ E DEFIYHE + H PLL H + K V I+GGG+G+ RE +HK++ES+ M +ID VV FCR++L N ++ + LV++D + + ++ FDVI D DP+ GP L+T +FYE K LN GIFV Q G F +E + + F V Y A +P++
Sbjct: 7 WHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPI--GPGESLFTSAFYEG-CKRCLNPGGIFVAQNGV--CFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTY 226
BLAST of DY305575 vs. ExPASy Swiss-Prot
Match: SPEE_ECO24 (Spermidine synthase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=speE PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 6.264e-36 Identity = 83/225 (36.89%), Postives = 128/225 (56.89%), Query Frame = 1
Query: 136 FEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLESVVMCDIDQEVVDFCRRFL-TVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPTGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSF 807
+ E + D FA++ VL+ ++ QD+ + + FG+V+ +DG +Q+ E DEFIYHE + H PLL H + K V I+GGG+G+ RE +HK++ES+ M +ID VV FCR++L N ++ + LV++D + + ++ FDVI D DP+ GP L+T +FYE K LN GIFV Q G F +E + + F V Y A +P++
Sbjct: 7 WHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPI--GPGESLFTSAFYEG-CKRCLNPGGIFVAQNGV--CFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTY 226 The following BLAST results are available for this feature:
BLAST of DY305575 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 220
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY305575 ID=DY305575; Name=DY305575; organism=Citrus sinensis; type=EST; length=1251bpback to top |