EY702578

Overview
NameEY702578
Unique NameEY702578
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702578 vs. ExPASy Swiss-Prot
Match: AGO2_RABIT (Protein argonaute-2 (Fragment) OS=Oryctolagus cuniculus GN=EIF2C2 PE=1 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 2.746e-39
Identity = 85/173 (49.13%), Postives = 110/173 (63.58%), Query Frame = 2
Query:   32 KPEQIIIFRDGVSESQFNQVLNVELNQIIEACKFLDEKWAPKFAVIVAQKNHHTKFF------QSGSPDNVPPGTVVDNKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFM--KFDDLSETSSSQG 526
            KP +II +RDGVSE QF QVL+ EL  I EAC  L++ + P    IV QK HHT+ F      + G   N+P GT VD K+ HP  +DFYLC+HAG+ GTSRP+HYHVL+D+  FSSDELQ L + L + Y R T ++S+ AP  YAHL A +    +  K  D +E S + G
Sbjct:  641 KPTRIIFYRDGVSEGQFQQVLHHELLAIREACIKLEKDYQPGITFIVVQKRHHTRLFCTDKNERVGKSGNIPAGTTVDTKITHPTEFDFYLCSHAGIQGTSRPSHYHVLWDDNRFSSDELQILTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKEHDSAEGSHTSG 813          
BLAST of EY702578 vs. ExPASy Swiss-Prot
Match: AGO2_MOUSE (Protein argonaute-2 OS=Mus musculus GN=Eif2c2 PE=1 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 2.746e-39
Identity = 85/173 (49.13%), Postives = 110/173 (63.58%), Query Frame = 2
Query:   32 KPEQIIIFRDGVSESQFNQVLNVELNQIIEACKFLDEKWAPKFAVIVAQKNHHTKFF------QSGSPDNVPPGTVVDNKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFM--KFDDLSETSSSQG 526
            KP +II +RDGVSE QF QVL+ EL  I EAC  L++ + P    IV QK HHT+ F      + G   N+P GT VD K+ HP  +DFYLC+HAG+ GTSRP+HYHVL+D+  FSSDELQ L + L + Y R T ++S+ AP  YAHL A +    +  K  D +E S + G
Sbjct:  661 KPTRIIFYRDGVSEGQFQQVLHHELLAIREACIKLEKDYQPGITFIVVQKRHHTRLFCTDKNERVGKSGNIPAGTTVDTKITHPTEFDFYLCSHAGIQGTSRPSHYHVLWDDNRFSSDELQILTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKEHDSAEGSHTSG 833          
BLAST of EY702578 vs. ExPASy Swiss-Prot
Match: AGO2_HUMAN (Protein argonaute-2 OS=Homo sapiens GN=EIF2C2 PE=1 SV=3)

HSP 1 Score: 162.54 bits (410), Expect = 2.746e-39
Identity = 85/173 (49.13%), Postives = 110/173 (63.58%), Query Frame = 2
Query:   32 KPEQIIIFRDGVSESQFNQVLNVELNQIIEACKFLDEKWAPKFAVIVAQKNHHTKFF------QSGSPDNVPPGTVVDNKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFM--KFDDLSETSSSQG 526
            KP +II +RDGVSE QF QVL+ EL  I EAC  L++ + P    IV QK HHT+ F      + G   N+P GT VD K+ HP  +DFYLC+HAG+ GTSRP+HYHVL+D+  FSSDELQ L + L + Y R T ++S+ AP  YAHL A +    +  K  D +E S + G
Sbjct:  660 KPTRIIFYRDGVSEGQFQQVLHHELLAIREACIKLEKDYQPGITFIVVQKRHHTRLFCTDKNERVGKSGNIPAGTTVDTKITHPTEFDFYLCSHAGIQGTSRPSHYHVLWDDNRFSSDELQILTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKEHDSAEGSHTSG 832          
BLAST of EY702578 vs. ExPASy Swiss-Prot
Match: AGO2_BOVIN (Protein argonaute-2 OS=Bos taurus GN=EIF2C2 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.746e-39
Identity = 85/173 (49.13%), Postives = 110/173 (63.58%), Query Frame = 2
Query:   32 KPEQIIIFRDGVSESQFNQVLNVELNQIIEACKFLDEKWAPKFAVIVAQKNHHTKFF------QSGSPDNVPPGTVVDNKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFM--KFDDLSETSSSQG 526
            KP +II +RDGVSE QF QVL+ EL  I EAC  L++ + P    IV QK HHT+ F      + G   N+P GT VD K+ HP  +DFYLC+HAG+ GTSRP+HYHVL+D+  FSSDELQ L + L + Y R T ++S+ AP  YAHL A +    +  K  D +E S + G
Sbjct:  661 KPTRIIFYRDGVSEGQFQQVLHHELLAIREACIKLEKDYQPGITFIVVQKRHHTRLFCTDKNERVGKSGNIPAGTTVDTKITHPTEFDFYLCSHAGIQGTSRPSHYHVLWDDNRFSSDELQILTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKEHDSAEGSHTSG 833          
BLAST of EY702578 vs. ExPASy Swiss-Prot
Match: AGO7_ORYSJ (Protein argonaute 7 OS=Oryza sativa subsp. japonica GN=AGO7 PE=2 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 1.258e-37
Identity = 78/163 (47.85%), Postives = 102/163 (62.58%), Query Frame = 2
Query:   35 PEQIIIFRDGVSESQFNQVLNVELNQIIEACKFLDEKWAPKFAVIVAQKNHHTKFFQSG--------SPDNVPPGTVVDNKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFDD 499
            P +II FRDGVSE+QF +VL  E++ +   C      + P    IV QK HHT+ F           S  N+PPGTVVD  + HPR +DFYLC+H G  GTSRPTHYHVL+DE  F SDE+Q+L+H+L Y + R T  +S+V P  YAHLAA +   +++  D
Sbjct:  859 PSRIIFFRDGVSETQFYKVLKEEMHAVRTTCSRYPG-YKPLITFIVVQKRHHTRLFHRERNGSSSHYSDQNIPPGTVVDTVITHPREFDFYLCSHWGTKGTSRPTHYHVLWDENNFRSDEVQQLIHNLCYTFARCTRPVSLVPPAYYAHLAAYRGRLYLERSD 1020          

HSP 2 Score: 23.0978 bits (48), Expect = 1.258e-37
Identity = 8/23 (34.78%), Postives = 14/23 (60.87%), Query Frame = 3
Query:  540 LDPVPVPQLPRLQEKVGNSMFFC 608
            + P+    LP+L++ V   MF+C
Sbjct: 1026 VSPLQTVPLPKLRDNVKRLMFYC 1048          
BLAST of EY702578 vs. ExPASy Swiss-Prot
Match: AGO3_ORYSJ (Protein argonaute 3 OS=Oryza sativa subsp. japonica GN=AGO3 PE=2 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 1.968e-37
Identity = 91/201 (45.27%), Postives = 118/201 (58.71%), Query Frame = 2
Query:   17 RVRKRKPEQIIIFRDGVSESQFNQVLNVELNQIIEACKFLDEKWAPKFAVIVAQKNHHTKFF------QSGSPDNVPPGTVVDNKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQ-----VGSFMKFDDLSETSSSQGGMTSAGPCSCPPAA*TAGES 586
            +V K+KP+ II FRDGVS+ QF+ VLN EL  +       D    PK  VIVA+K HHT+ F      +     NV PGTVVD  V  P  YDFYLC+H G +GTSRPTHY+ L DE GF+SD+LQ+LV++L +V+ R T  +S+  P+ YA LAA +      G  M     S  S+S+  M +A P +   AA  A  S
Sbjct:  863 KVNKKKPDSIIYFRDGVSDGQFDMVLNEELADMENKIMVGDY---PKITVIVAKKRHHTRLFPKDRNQRQTKNGNVLPGTVVDTDVVDPTAYDFYLCSHKGEVGTSRPTHYYSLLDEHGFASDDLQKLVYNLCFVFARCTKPVSLATPVYYADLAAYRGRLYYEGMMMLQPAASAASASEAMMPAAQPQAAAAAAAAASPS 1060          
BLAST of EY702578 vs. ExPASy Swiss-Prot
Match: AGO3_MOUSE (Protein argonaute-3 OS=Mus musculus GN=Eif2c3 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.968e-37
Identity = 83/180 (46.11%), Postives = 108/180 (60.00%), Query Frame = 2
Query:   32 KPEQIIIFRDGVSESQFNQVLNVELNQIIEACKFLDEKWAPKFAVIVAQKNHHTKFF------QSGSPDNVPPGTVVDNKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFM--KFDDLSETSSSQGGMTSAGP 547
            KP +II +RDGVSE QF QVL  EL  I EAC  L++ + P    IV QK HHT+ F      + G   N+P GT VD  + HP  +DFYLC+HAG+ GTSRP+HYHVL+D+  F++DELQ L + L + Y R T ++S+ AP  YAHL A +    +  K  D +E S   G      P
Sbjct:  661 KPTRIIFYRDGVSEGQFRQVLYYELLAIREACISLEKDYQPGITYIVVQKRHHTRLFCADRTERVGRSGNIPAGTTVDTDITHPYEFDFYLCSHAGIQGTSRPSHYHVLWDDNFFTADELQLLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKEHDSAEGSHVSGQSNGRDP 840          
BLAST of EY702578 vs. ExPASy Swiss-Prot
Match: AGO3_HUMAN (Protein argonaute-3 OS=Homo sapiens GN=EIF2C3 PE=1 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 1.968e-37
Identity = 83/180 (46.11%), Postives = 108/180 (60.00%), Query Frame = 2
Query:   32 KPEQIIIFRDGVSESQFNQVLNVELNQIIEACKFLDEKWAPKFAVIVAQKNHHTKFF------QSGSPDNVPPGTVVDNKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFM--KFDDLSETSSSQGGMTSAGP 547
            KP +II +RDGVSE QF QVL  EL  I EAC  L++ + P    IV QK HHT+ F      + G   N+P GT VD  + HP  +DFYLC+HAG+ GTSRP+HYHVL+D+  F++DELQ L + L + Y R T ++S+ AP  YAHL A +    +  K  D +E S   G      P
Sbjct:  661 KPTRIIFYRDGVSEGQFRQVLYYELLAIREACISLEKDYQPGITYIVVQKRHHTRLFCADRTERVGRSGNIPAGTTVDTDITHPYEFDFYLCSHAGIQGTSRPSHYHVLWDDNCFTADELQLLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKEHDSAEGSHVSGQSNGRDP 840          
BLAST of EY702578 vs. ExPASy Swiss-Prot
Match: AGO3_CHICK (Protein argonaute-3 OS=Gallus gallus GN=EIF2C3 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.968e-37
Identity = 83/180 (46.11%), Postives = 108/180 (60.00%), Query Frame = 2
Query:   32 KPEQIIIFRDGVSESQFNQVLNVELNQIIEACKFLDEKWAPKFAVIVAQKNHHTKFF------QSGSPDNVPPGTVVDNKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFM--KFDDLSETSSSQGGMTSAGP 547
            KP +II +RDGVSE QF QVL  EL  I EAC  L++ + P    IV QK HHT+ F      + G   N+P GT VD  + HP  +DFYLC+HAG+ GTSRP+HYHVL+D+  F++DELQ L + L + Y R T ++S+ AP  YAHL A +    +  K  D +E S   G      P
Sbjct:  661 KPTRIIFYRDGVSEGQFRQVLYYELLAIREACISLEKDYQPGITYIVVQKRHHTRLFCADRTERVGRSGNIPAGTTVDTDITHPYEFDFYLCSHAGIQGTSRPSHYHVLWDDNCFTADELQLLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKEHDSAEGSHVSGQSNGRDP 840          
BLAST of EY702578 vs. ExPASy Swiss-Prot
Match: AGO2_ORYSJ (Protein argonaute 2 OS=Oryza sativa subsp. japonica GN=AGO2 PE=2 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 4.385e-37
Identity = 89/192 (46.35%), Postives = 117/192 (60.94%), Query Frame = 2
Query:   32 KPEQIIIFRDGVSESQFNQVLNVELNQIIEACKFLDEKWAPKFAVIVAQKNHHTKFF------QSGSPDNVPPGTVVDNKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFDDLSETSSSQGGMTSAGPCSCPPAA*TAGESG 589
            KP++II FRDGVS+ QF+ VLN EL  + +A K  D  ++P   VIVA+K HHT+ F      Q     NV PGTVVD  V  P  YDFYLC+H G+IGTSRPTHY+ L DE GF+SD+LQ+LV++L +V+ R T  +S+  P+ YA LAA +   +            +G M S  P S   +A +A  SG
Sbjct:  833 KPQRIIYFRDGVSDGQFDMVLNEELADMEKAIKTKD--YSPTITVIVAKKRHHTRLFPKDLNQQQTKNGNVLPGTVVDTGVVDPAAYDFYLCSHNGLIGTSRPTHYYSLLDEHGFASDDLQKLVYNLCFVFARCTKPVSLATPVYYADLAAYRGRLYY-----------EGMMMSQPPPSSAASASSASSSG 1011          
The following BLAST results are available for this feature:
BLAST of EY702578 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
AGO2_RABIT2.746e-3949.13Protein argonaute-2 (Fragment) OS=Oryctolagus cuni... [more]
AGO2_MOUSE2.746e-3949.13Protein argonaute-2 OS=Mus musculus GN=Eif2c2 PE=1... [more]
AGO2_HUMAN2.746e-3949.13Protein argonaute-2 OS=Homo sapiens GN=EIF2C2 PE=1... [more]
AGO2_BOVIN2.746e-3949.13Protein argonaute-2 OS=Bos taurus GN=EIF2C2 PE=2 S... [more]
AGO7_ORYSJ1.258e-3747.85Protein argonaute 7 OS=Oryza sativa subsp. japonic... [more]
AGO3_ORYSJ1.968e-3745.27Protein argonaute 3 OS=Oryza sativa subsp. japonic... [more]
AGO3_MOUSE1.968e-3746.11Protein argonaute-3 OS=Mus musculus GN=Eif2c3 PE=2... [more]
AGO3_HUMAN1.968e-3746.11Protein argonaute-3 OS=Homo sapiens GN=EIF2C3 PE=1... [more]
AGO3_CHICK1.968e-3746.11Protein argonaute-3 OS=Gallus gallus GN=EIF2C3 PE=... [more]
AGO2_ORYSJ4.385e-3746.35Protein argonaute 2 OS=Oryza sativa subsp. japonic... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-009-F07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702578 ID=EY702578; Name=EY702578; organism=Citrus sinensis; type=EST; length=868bp
TTCCTTGGTCGACCCACGCGTCCGGAAAAGGAAACCTGAACAGATCATCA
TATTCAGGGATGGTGTCAGTGAATCACAGTTTAATCAAGTCTTGAACGTT
GAACTGAATCAGATTATAGAGGCGTGCAAGTTTCTGGATGAGAAGTGGGC
CCCAAAGTTTGCGGTGATTGTTGCACAGAAGAATCACCATACAAAATTTT
TCCAGTCGGGATCTCCTGACAATGTTCCTCCTGGAACTGTTGTTGACAAC
AAAGTCTGTCATCCAAGAAACTATGACTTCTACCTTTGTGCCCATGCTGG
AATGATTGGTACTTCAAGGCCAACACATTACCACGTTCTATTTGATGAAA
TTGGCTTTTCAAGTGATGAGCTGCAGGAACTAGTGCACTCACTTTCTTAT
GTGTACCAGAGAAGCACTACAGCCATTTCTGTAGTTGCTCCAATTTGCTA
TGCCCACTTGGCAGCAAGCCAGGTAGGATCATTCATGAAGTTTGACGACT
TATCAGAGACATCTTCTAGCCAGGGTGGGATGACATCTGCTGGACCCTGT
TCCTGTCCCCCAGCTGCCTAGACTGCAGGAGAAAGTGGGCAATTCAATGT
TCTTCTGTTGAGACACTTGTGTGGCTTCTACCGGCAATCAAAATCCTATC
CAAGGAGTTTGTATATAGTTAGCCTTTTTGGTTTCCTCTGGACCATCCAG
GGGGCAAGGTGTCTAGAAATTGTAGGGATGCCTTGAAATCTCTGGTATTA
ATTCTGGGTCTAAAACCCAAAGGGCCCGGGGCCTTTGTTTTGGGGGAATA
CCGGGGGGTGTGCACCTTGCACGCCCGGGCTTCCCCGAGCTCCTTTTTTC
CCAGACAGCAGGGGGGGG
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