DY305572

Overview
NameDY305572
Unique NameDY305572
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1292
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305572 vs. ExPASy Swiss-Prot
Match: GAL10_CANMA (Bifunctional protein GAL10 (Fragment) OS=Candida maltosa GN=GAL10 PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.560e-29
Identity = 72/149 (48.32%), Postives = 97/149 (65.10%), Query Frame = 3
Query:  126 LVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFDAVIHFAGLKAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVY------GWPKVVPCTEEFPLE 554
            LVTGGAGYIGSHTV++L+  G K V+ DNL N+S  AVA+++ +      +  F K+D+R++  L  +F+  K   VIHFA LKAVGES + PL Y+DNN+ GTI LL V  ++  K +VFSSSATVY      G   ++P  E  P+E
Sbjct:    7 LVTGGAGYIGSHTVIELINHGIKVVIADNLSNSSYDAVARIEFIVKQHVSH--FIKVDIRNEKELNQVFSNHKISGVIHFAALKAVGESTKIPLEYYDNNVSGTIALLNVCKSNNVKTIVFSSSATVYGDVTRFGDNSMIPIPEHCPME 153          
BLAST of DY305572 vs. ExPASy Swiss-Prot
Match: GALE_MYCPN (UDP-glucose 4-epimerase OS=Mycoplasma pneumoniae GN=galE PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 2.108e-26
Identity = 87/243 (35.80%), Postives = 129/243 (53.09%), Query Frame = 3
Query:  123 ILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLD-NASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFDAVIHFAGLKAVGESVQKPLLYFDNNLIGTITLLEVM-AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLE---AMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGA-HPSGKIGEDPR-GIPNNLMPFVTQIAVGRRPNLTVFGNDYSKKEGTGVREYIHV 830
            +LV GG GYIGS  + QLL   Y  V V  +D N + +A+  +          +  H ++L D+A L    A+   D V HFA   +V ES ++PL YFD+NL+GT+ LL  +        L FSS+A V+G    +P  E   LE   A NPYG +K   E + + + RS   +++I LRYFN  GA +P G   ++    IPN +  F+       +    ++G+DY  K+G+ +R+YIHV
Sbjct:    8 VLVLGGLGYIGSCFIDQLLKQ-YPDVTVSVIDINHTSLALQLLPR-------QVNVHFVNLLDRAQLTDTIAQINPDVVFHFAAKTSVKESTEQPLTYFDHNLVGTLNLLHALKELQKPIQLFFSSTAAVFGSASTLPIPENLVLEETLASNPYGISKFLSEIVLQTLTRS-PHFQVIALRYFNVAGASNPFGNFNKNTTLLIPNLIKAFM------EKRTFFLYGDDYDTKDGSCIRDYIHV 235          
BLAST of DY305572 vs. ExPASy Swiss-Prot
Match: GALE_MYCGE (UDP-glucose 4-epimerase OS=Mycoplasma genitalium GN=galE PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 3.366e-24
Identity = 82/242 (33.88%), Postives = 125/242 (51.65%), Query Frame = 3
Query:  123 ILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFDAVIHFAGLKAVGESVQKPLLYFDNNLIGTITLLEVMA-AHGCKNLVFSSSATVYGWPKVVPCTEEFPL---EAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGA-HPSGKI-GEDPRGIPNNLMPFVTQIAVGRRPNLTVFGNDYSKKEGTGVREYIHV 830
            + + GG GYIGS      +      ++V  +DN     V K+ +  G     + F+  DL D+  L  + A  + D V HFA   +V ESV  PL YFD N+IGT+ L+  ++       L F+SSA VYG       +EE  +   +A NPYG +K F++E+  +    +S+ +++ LR+FN  GA  P G   G     IPN +  F+ Q          ++GNDY+ K+G+ +R+YIHV
Sbjct:    8 VAIVGGIGYIGS-CFASFIKEQNDKLIVTVIDNNKNNHVIKLLKKIG-----IEFYFADLLDRHKLTEVIAAIQPDVVFHFAAKTSVSESVHNPLKYFDCNVIGTLNLISAISNLQKPIKLFFASSAAVYGQTTNSYISEEIVITETQATNPYGLSK-FLDELILNAVAKNSQLQVVCLRFFNVAGAILPFGNFNGNTTLLIPNLVKAFLKQTP------FFLYGNDYATKDGSCIRDYIHV 236          
BLAST of DY305572 vs. ExPASy Swiss-Prot
Match: GALE_METJA (Putative UDP-glucose 4-epimerase OS=Methanocaldococcus jannaschii GN=MJ0211 PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 2.667e-21
Identity = 79/249 (31.73%), Postives = 123/249 (49.40%), Query Frame = 3
Query:  123 ILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFDAVIHFAGLKAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSS-ATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQIAVGRRPNLTVFGNDYSKKEGTGVREYIHVNKHN*RAKLLAL 866
            ILVTGGAG+IGSH V +L+   Y  +++DNL   ++           N      F   D+RDK   E +  K   + VIH A    V  SV+ P+   D N++GTI +LE+M  +    +VF+SS   VYG P  +P  E  P+  ++PYG +K   EE  +  +R     +  +LRY N  G        +DP+G    +  F+ ++   + P   +FG      +G   R++++V     +A L+AL
Sbjct:    2 ILVTGGAGFIGSHIVDKLIENNYDVIILDNLTTGNK----------NNINPKAEFVNADIRDKDLDEKINFK-DVEVVIHQAAQINVRNSVENPVYDGDINVLGTINILEMMRKYDIDKIVFASSGGAVYGEPNYLPVDENHPINPLSPYGLSKYVGEEYIKLYNRLYG-IEYAILRYSNVYGER------QDPKGEAGVISIFIDKMLKNQSP--IIFG------DGNQTRDFVYVGDVA-KANLMAL 223          
BLAST of DY305572 vs. ExPASy Swiss-Prot
Match: TGDS_DICDI (dTDP-D-glucose 4,6-dehydratase OS=Dictyostelium discoideum GN=tgds PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 3.374e-16
Identity = 71/258 (27.52%), Postives = 114/258 (44.19%), Query Frame = 3
Query:  105 DSMAKNILVTGGAGYIGSHTVLQLL--LGGYKTVVVDNLDNASEI--AVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFDAVIHFAGLKAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKV-----------VPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQIAVGRRPNLTVFGNDYSKKEGTGVREYIHVN 833
            D   + IL+TGGAG+IGSH  + L       K +V+D LD  S I      +KEL      N  F+K ++ D   LE +F K K D VIH A    V  S ++ + + +NN++GT  LLE    +  K  ++ S+  VYG   +               E+  L   NPY  +K   E + +  ++S  +  +I+ R  N  G          P+  P  ++P    + +  +   T+ G       G   R Y++++
Sbjct:    6 DLFIQKILITGGAGFIGSHLAIYLTKKFKNSKIIVLDKLDYCSNINNLGCVLKEL------NFKFYKGNILDSELLENIFEKEKIDIVIHLAAYTHVDNSFKQSIKFTENNILGTHYLLETCKNYKLKKFIYVSTDEVYGSGLIEDNDDNNNSINQSSNEKSILNPTNPYSASKAGAEHLVQSYYKS-FKLPVIITRANNIYG----------PKQYPEKIIPKFINLLLNNK-KCTIHGT------GKNTRNYLYID 239          
BLAST of DY305572 vs. ExPASy Swiss-Prot
Match: YCL2_ECO11 (Uncharacterized 37.6 kDa protein in cld 5'region OS=Escherichia coli O111:H- PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.187e-15
Identity = 52/154 (33.77%), Postives = 88/154 (57.14%), Query Frame = 3
Query:  126 LVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVK-ELAGNQGDNMTFHKLDLRDKAALEALFAKTKFDAVIHFAGLKAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKVVP-CTEEFPLEAMNPYGRTK 581
            LVTG AG+IG H   +LL  G++ V +DNL++  ++++ + + EL    G    FHK+DL D+  +  LFA   F+ V       AV  S++ P  Y D+NL G + +LE    +  ++L+++SS++VYG  + +P  T++     ++ Y  TK
Sbjct:    4 LVTGAAGFIGFHVSKRLLEAGHQVVGIDNLNDYYDVSLKQARLELLAQPG--FQFHKIDLADREGMTDLFASGHFERVFISPHRLAVRYSLENPHAYADSNLTGFLNILEGCRHNKIQHLLYASSSSVYGLNRKMPFSTDDSVDHPVSLYAATK 155          
BLAST of DY305572 vs. ExPASy Swiss-Prot
Match: Y1055_METJA (Uncharacterized protein MJ1055 OS=Methanocaldococcus jannaschii GN=MJ1055 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.085e-14
Identity = 60/191 (31.41%), Postives = 98/191 (51.31%), Query Frame = 3
Query:  117 KNILVTGGAGYIGSHTVLQLLLGGY---KTVVVDNLDNA-SEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFDAVIHFAGLKAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLE-AMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAH 674
            KNILVTG AG+IG H + + L+  Y   K + +DNL+N  + +   K  E+  N  +N TF KLD  D   L       + D ++H      V  S+Q P  Y  +N +GT+ + E       + +V++SS++VYG  + +P +E+  ++  ++ Y  TK    E+   V+      K+I LR+F   G +
Sbjct:    4 KNILVTGSAGFIGFH-LSKYLMDNYEDLKVIGIDNLNNYYNPVLKEKRNEILKNY-ENYTFIKLDFSDWDDLVENLKDKEIDLIVHLGAQAGVRYSLQNPWAYIKSNEMGTLNIFEFARRFDIEKVVYASSSSVYGGNRKIPFSEDDRVDKPISLYASTKR-SNELMAHVYHHLYGIKMIGLRFFTVYGEY 191          
BLAST of DY305572 vs. ExPASy Swiss-Prot
Match: ACBB_ACTS5 (dTDP-glucose 4,6-dehydratase OS=Actinoplanes sp. (strain 50/110) GN=acbB PE=3 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 1.085e-14
Identity = 73/248 (29.44%), Postives = 111/248 (44.76%), Query Frame = 3
Query:  123 ILVTGGAGYIGSHTVLQLLLGGYKT-------VVVDNLDNASEIAVAKVKELAGNQGD-NMTFHKLDLRDKAALEALFAKTKFDAVIHFAGLKAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMP-FVTQIAVGRRPNLTVFGNDYSKKEGTGVREYIHVNKH 839
            ILVTGGAG+IGSH V  L+ G   T        VVD L     +     + LA    D   +F + D+ D+  +E L A+   D V HFA    V  SV     +  +NL+GT  LL+    H     +  S+  VYG        E  PL   +PY  +K   + +    H++     +++ R  N  G          PR  P  ++P FVT++  G   ++ V+G      +G  +R+++HV+ H
Sbjct:    3 ILVTGGAGFIGSHFVTSLISGDIATPQPVTQVTVVDKLGYGGNL-----RNLAEASADPRFSFVRGDICDEGLIEGLMAR--HDTVAHFAAETHVDRSVVASGPFVASNLVGTQVLLDAALRHHIGRFLHVSTDEVYGSIDTGSWAEGHPLAPNSPYAASKAGSDLLALAYHQTHG-MDVVVTRCSNNYG----------PRQFPEKMIPLFVTRLLDGL--DVPVYG------DGRNIRDWLHVSDH 224          
BLAST of DY305572 vs. ExPASy Swiss-Prot
Match: CAPI_STAAU (Protein capI OS=Staphylococcus aureus GN=capI PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.124e-14
Identity = 41/130 (31.54%), Postives = 76/130 (58.46%), Query Frame = 3
Query:  123 ILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFDAVIHFAGLKAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYG 512
            IL+TG AG+IGSH   +L+  G+  + VD++++   +++ K   L     +N TF+K+ L +   L  +F   + + V++ A    V  S++ P  Y D+N++G + +LE       +NL+++SS++VYG
Sbjct:    3 ILITGTAGFIGSHLAKKLIKQGHYVIGVDSINDYYSVSL-KEDRLKSIGKENFTFNKVKLENYDDLSKVFVDEQPEVVVNLAAQAGVRYSIENPRTYIDSNIVGFMNILECSRHFNIQNLIYASSSSVYG 131          
BLAST of DY305572 vs. ExPASy Swiss-Prot
Match: TGDS_BOVIN (dTDP-D-glucose 4,6-dehydratase OS=Bos taurus GN=TGDS PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 7.035e-14
Identity = 57/194 (29.38%), Postives = 88/194 (45.36%), Query Frame = 3
Query:   93 VSPLDSMAKNILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFDAVIHFAGLKAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAH 674
            + P DS AK +LVTGGAG+I SH ++ L+   Y   ++ NLD     A  K  E   N+  N  F + D+ D   ++ LF   K D V+HFA    V  S  +   +   N+ GT  L+        +  ++ S+  VYG        E  P +  NPY  +K   E   +  +    ++ +++ R  N  G H
Sbjct:   10 LGPPDSFAKRVLVTGGAGFIASHMIVSLV-EDYPNYMIINLDKLDYCASLKNLETISNK-QNYKFIQGDICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEKFIYVSTDEVYGGSLDKEFDESSPKQPTNPYASSKAAAECFVQS-YWEQYKFPVVITRSSNVYGPH 200          
The following BLAST results are available for this feature:
BLAST of DY305572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
GAL10_CANMA1.560e-2948.32Bifunctional protein GAL10 (Fragment) OS=Candida m... [more]
GALE_MYCPN2.108e-2635.80UDP-glucose 4-epimerase OS=Mycoplasma pneumoniae G... [more]
GALE_MYCGE3.366e-2433.88UDP-glucose 4-epimerase OS=Mycoplasma genitalium G... [more]
GALE_METJA2.667e-2131.73Putative UDP-glucose 4-epimerase OS=Methanocaldoco... [more]
TGDS_DICDI3.374e-1627.52dTDP-D-glucose 4,6-dehydratase OS=Dictyostelium di... [more]
YCL2_ECO112.187e-1533.77Uncharacterized 37.6 kDa protein in cld 5'region O... [more]
Y1055_METJA1.085e-1431.41Uncharacterized protein MJ1055 OS=Methanocaldococc... [more]
ACBB_ACTS51.085e-1429.44dTDP-glucose 4,6-dehydratase OS=Actinoplanes sp. (... [more]
CAPI_STAAU4.124e-1431.54Protein capI OS=Staphylococcus aureus GN=capI PE=3... [more]
TGDS_BOVIN7.035e-1429.38dTDP-D-glucose 4,6-dehydratase OS=Bos taurus GN=TG... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1CA03RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305572 ID=DY305572; Name=DY305572; organism=Citrus sinensis; type=EST; length=1292bp
CCAAGCCCAAGTCTCATCACTTCCTTCGTAATTCCCCCGTTTCTTCAATT
TTTCGTGTACTTTGTTCCTTTTTTTTTTGGTTCTTCTGATTGGTCTCTCC
GTTAGACTCCATGGCTAAGAACATTTTGGTGACCGGTGGCGCCGGTTACA
TTGGAAGCCACACCGTGCTTCAGTTGCTGTTAGGCGGTTACAAAACTGTC
GTCGTTGACAATCTCGATAATGCCTCGGAAATCGCCGTCGCAAAAGTCAA
AGAACTCGCTGGCAATCAAGGCGACAACATGACCTTTCATAAGTTGGATC
TCCGAGACAAAGCAGCGCTGGAAGCATTGTTTGCCAAAACAAAGTTCGAT
GCTGTCATCCATTTTGCTGGACTGAAAGCAGTTGGTGAAAGTGTGCAAAA
ACCATTGCTGTATTTTGACAACAATCTTATTGGAACCATAACTCTCTTGG
AAGTTATGGCAGCACATGGCTGCAAAAATCTGGTCTTTTCATCATCAGCT
ACTGTTTATGGCTGGCCAAAGGTGGTTCCGTGTACAGAAGAGTTCCCGTT
AGAGGCAATGAACCCTTATGGACGTACCAAGCTTTTCATTGAAGAGATTT
GCCGTGATGTCCACCGCTCAGACTCTGAATGGAAGATCATATTGCTGAGA
TATTTCAATCCTGTTGGTGCACATCCAAGTGGCAAAATTGGTGAGGATCC
CCGTGGAATTCCAAACAATCTCATGCCCTTCGTCACTCAAATTGCTGTTG
GCAGGCGTCCAAACCTGACAGTATTTGGAAATGATTACTCAAAAAAAGAA
GGTACTGGGGTCCGTGAATACATTCATGTTAATAAACATAACTAAAGGGC
AAAATTGCTGGCATTGCAAAAACCTGAAGATCCCAAAAAAAAGTTGTGAA
ATGAAAAACATTGGAAAACGGAAAAAAAAAAATCTTTTTTGTAAAATGTT
TACAACTTTTGAAAAACCCTCTGGAAAAAAAAATTCCCCTTTAAAAGTTT
GGGGAAGGAAACACCAAAAACACAAAAATTATATAAGCTATAAAAGAAAA
CGCAAAAGATAAAATTATTAAAAAAAAGAAAAAAGTGGATTCAAAAAATA
TTTAAAAAATACTTAAAAATTAGGCACATACCAAACACTATTTCTCTCAA
TAAGTATATCACATTAAATAAAGCATAATAAAAAATTACATTATATGACC
CCAATAAAATAAATAATAACTACCACAAAAAAAAAAAGATATAAACTACT
GAAAAGCTAATATATATAAATATTTACATAAAATATATTATA
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