DY305572
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305572 vs. ExPASy Swiss-Prot
Match: TGDS_MOUSE (dTDP-D-glucose 4,6-dehydratase OS=Mus musculus GN=Tgds PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.047e-13 Identity = 57/192 (29.69%), Postives = 87/192 (45.31%), Query Frame = 3 Query: 99 PLDSMAKNILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFDAVIHFAGLKAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAH 674 P S AK +LVTGGAG+I SH ++ L+ Y ++ NLD A K E N+ N F + D+ D ++ LF K D V+HFA V S + + N+ GT L+ G + ++ S+ VYG E P + NPY +K E + + ++ +++ R N G H Sbjct: 12 PPGSFAKRVLVTGGAGFIASHVIVSLV-EDYPDYMIVNLDKLDYCASLKNLEPVSNK-QNYKFIQGDICDSHFVKLLFEVEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNAAYEAGVEKFIYVSTDEVYGGSLDQEFDESSPKQPTNPYASSKAAAECFVQS-YWERYKFPVVITRSSNVYGPH 200
BLAST of DY305572 vs. ExPASy Swiss-Prot
Match: STRE_STRGR (dTDP-glucose 4,6-dehydratase OS=Streptomyces griseus GN=strE PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.263e-12 Identity = 73/246 (29.67%), Postives = 108/246 (43.90%), Query Frame = 3 Query: 111 MAKNILVTGGAGYIGSHTVLQLL-LGGYKTVVVDNLDNASEIAVAKVKELAGNQGD-NMTFHKLDLRDKAALEALFAKTKFDAVIHFAGLKAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMP-FVTQIAVGRRPNLTVFGNDYSKKEGTGVREYIHVNKH 839 M ++LVTG AG+IGS V LL GG VVV LD + LA +G F + D+ D + + D V+H A V S+ ++ N+ GT TLL+ HG + V S+ VYG + TE+ PL +PY +K ++ H + + R N G PR P L+P F+T + G R + ++G +G VRE++HV+ H Sbjct: 1 MTTHLLVTGAAGFIGSQYVRTLLGPGGPPDVVVTALDALTY--AGNPDNLAAVRGHPRYRFERGDICDAPGRRVMAGQ---DQVVHLAAESHVDRSLLDASVFVRTNVHGTQTLLDAATRHGVASFVQVSTDEVYGSLEHGSWTEDEPLRPNSPYSASKA-SGDLLALAHHVSHGLDVRVTRCSNNYG----------PRQFPEKLIPRFITLLMDGHR--VPLYG------DGLNVREWLHVDDH 222
BLAST of DY305572 vs. ExPASy Swiss-Prot
Match: TGDS_HUMAN (dTDP-D-glucose 4,6-dehydratase OS=Homo sapiens GN=TGDS PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 3.860e-12 Identity = 54/187 (28.88%), Postives = 84/187 (44.92%), Query Frame = 3 Query: 114 AKNILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFDAVIHFAGLKAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAH 674 AK +LVTGGAG+I SH ++ L+ Y ++ NLD A K E N+ N F + D+ D ++ LF K D V+HFA V S + + N+ GT L+ + ++ S+ VYG E P + NPY +K E + + ++ +++ R N G H Sbjct: 17 AKRVLVTGGAGFIASHMIVSLV-EDYPNYMIINLDKLDYCASLKNLETISNK-QNYKFIQGDICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEKFIYVSTDEVYGGSLDKEFDESSPKQPTNPYASSKAAAECFVQS-YWEQYKFPVVITRSSNVYGPH 200
BLAST of DY305572 vs. ExPASy Swiss-Prot
Match: RFBB_NEIGO (dTDP-glucose 4,6-dehydratase OS=Neisseria gonorrhoeae GN=rfbB PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 5.041e-12 Identity = 72/253 (28.46%), Postives = 115/253 (45.45%), Query Frame = 3 Query: 117 KNILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIA-VAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFDAVIHFAGLKAVGESVQKPLLYFDNNLIGTITLLEVMAAH-----GCKNLVFS----SSATVYGWPKVVP--CTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQIAVGRRPNLTVFGNDYSKKEGTGVREYIHVNKH 839 KNILVTGGAG+IGS V ++ +VV NLD + + + ++A N F ++D+ D+A L+ +FA+ + DAV+H A V ++ + N++GT LLE A+ K F S+ VYG TE P +PY +K + + R R+ I+ ++ S G PR P L+P + A+ +P L V+G +G +R+++ V H Sbjct: 7 KNILVTGGAGFIGSAVVRHIIQNTRDSVV--NLDKLTYAGNLESLTDIADNP--RYAFEQVDICDRAELDRVFAQYRPDAVMHLAAESHVDRAIGSAGEFIRTNIVGTFDLLEAARAYWQQMPSEKREAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKAAADHLVRAWQRTYRLPSIV---------SNCSNNYG--PRQFPEKLIPLMILNALSGKP-LPVYG------DGAQIRDWLFVEDH 237
BLAST of DY305572 vs. ExPASy Swiss-Prot
Match: RFBB_XANCB (dTDP-glucose 4,6-dehydratase OS=Xanthomonas campestris pv. campestris (strain B100) GN=rfbB PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 8.599e-12 Identity = 71/249 (28.51%), Postives = 110/249 (44.18%), Query Frame = 3 Query: 126 LVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFDAVIHFAGLKAVGESVQKPLLYFDNNLIGTITLLEVM---------AAHGCKNLVFSSSATVYG-WPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPV-GAHPSGKIGEDPRGIPNNLMPFVTQIAVGRRPNLTVFGNDYSKKEGTGVREYIHVNKH 839 LVTGGAG+IG + VL+ + G + V +D L A + + L GN + F K D+ D A + L + + DAV++FA V S++ P + N++GT+ LLE + + S+ VYG + TE P +PY +K + + R H + Y PV + S G P P L+P V A+ P L V+G +G VR+++ V+ H Sbjct: 5 LVTGGAGFIGGNFVLEAVSRGIRVVNLDALTYAGNLNT--LASLEGNA--DHIFVKGDIGDGALVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPDTRRDAFRFLHVSTDEVYGTLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHT----------YGLPVLTTNCSNNYG--PYHFPEKLIPLVIAKALAGEP-LPVYG------DGKQVRDWLFVSDH 230
BLAST of DY305572 vs. ExPASy Swiss-Prot
Match: GNE_ECO57 (UDP-N-acetylglucosamine 4-epimerase OS=Escherichia coli O157:H7 GN=gne PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 8.599e-12 Identity = 61/216 (28.24%), Postives = 104/216 (48.15%), Query Frame = 3 Query: 111 MAKNILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFDAVIHFAGLKAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRD-VHRSDSEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQIAVGR 755 M N+L+ G +G++G+ +L+ + + + NLD ++ ++ D+RD+ AL+ A FD V+ A + V LY+D N+ GT +L M +G KN++F+SS VYG K P E P + N YG++K EE+ R+ +++ +E + ++R P+ GE RG N+ + QIA G+ Sbjct: 1 MNDNVLLIGASGFVGTR-LLETAIADFN---IKNLDKQQSHFYPEITQIG------------DVRDQQALDQALAG--FDTVVLLAAEHR--DDVSPTSLYYDVNVQGTRNVLAAMEKNGVKNIIFTSSVAVYGLNKHNP-DENHPHDPFNHYGKSKWQAEEVLREWYNKAPTERSLTIIR--------PTVIFGERNRG---NVYNLLKQIAGGK 184
BLAST of DY305572 vs. ExPASy Swiss-Prot
Match: RFFG_ECOLI (dTDP-glucose 4,6-dehydratase OS=Escherichia coli (strain K12) GN=rffG PE=1 SV=3) HSP 1 Score: 71.2478 bits (173), Expect = 1.467e-11 Identity = 71/254 (27.95%), Postives = 111/254 (43.70%), Query Frame = 3 Query: 117 KNILVTGGAGYIGSHTVLQLLLG-GYKTVVVDNLDNASEI-AVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFDAVIHFAGLKAVGESVQKPLLYFDNNLIGTITLLEVMAAH-----GCKNLVFS----SSATVYGWPKVVP--CTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQIAVGRRPNLTVFGNDYSKKEGTGVREYIHVNKH 839 + IL+TGGAG+IGS V ++ VVVD L A + ++A V Q + F K+D+ D+A L +F + + D V+H A V S+ P + + N++GT TLLE A+ K F S+ VYG TE P +PY +K + + R W LR + + P P L+P + A+ + +L V+GN G +R++++V H Sbjct: 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVA-----QSERFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVR-------AW----LRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGK-SLPVYGN------GQQIRDWLYVEDH 232
BLAST of DY305572 vs. ExPASy Swiss-Prot
Match: RHM3_ARATH (Probable rhamnose biosynthetic enzyme 3 OS=Arabidopsis thaliana GN=RHM3 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.502e-11 Identity = 72/244 (29.51%), Postives = 101/244 (41.39%), Query Frame = 3 Query: 117 KNILVTGGAGYIGSHTVLQLLLG--GYKTVVVDNLDNASEIAVAKVKELAGNQGD-NMTFHKLDLRDKAALEALFAKTKFDAVIHFAGLKAVGESVQKPLLYFDNNLIGTITLLEVMAAHG-CKNLVFSSSATVYG---WPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQIAVGRRPNLTVFGNDYSKKEGTGVREYIH 827 KNIL+TG AG+I SH +L+ YK VV+D LD S + K L ++ N F K D+ + L + D ++HFA V S + NN+ GT LLE G + + S+ VYG V E L NPY TK E + RS +I R N G P P L+P +A+ +P L + G +G+ VR Y++ Sbjct: 7 KNILITGAAGFIASHVANRLVRSYPDYKIVVLDKLDYCSNL-----KNLNPSKSSPNFKFVKGDIASADLVNYLLITEEIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDASVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG-LPVITTRGNNVYG----------PNQFPEKLIPKFILLAMNGKP-LPIHG------DGSNVRSYLY 227
BLAST of DY305572 vs. ExPASy Swiss-Prot
Match: RHM2_ARATH (Probable rhamnose biosynthetic enzyme 2 OS=Arabidopsis thaliana GN=RHM2 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.502e-11 Identity = 71/244 (29.10%), Postives = 100/244 (40.98%), Query Frame = 3 Query: 117 KNILVTGGAGYIGSHTVLQLLLG--GYKTVVVDNLDNASEIAVAKVKELAGN-QGDNMTFHKLDLRDKAALEALFAKTKFDAVIHFAGLKAVGESVQKPLLYFDNNLIGTITLLEVMAAHG-CKNLVFSSSATVYG---WPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQIAVGRRPNLTVFGNDYSKKEGTGVREYIH 827 KNIL+TG AG+I SH +L+ YK VV+D LD S++ K L + N F K D+ + L D ++HFA V S + NN+ GT LLE G + + S+ VYG V E L NPY TK E + RS +I R N G P P ++P +A+ +P L + G +G+ VR Y++ Sbjct: 9 KNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSDL-----KNLDPSFSSPNFKFVKGDIASDDLVNYLLITENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAAVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG-LPVITTRGNNVYG----------PNQFPEKMIPKFILLAMSGKP-LPIHG------DGSNVRSYLY 229
BLAST of DY305572 vs. ExPASy Swiss-Prot
Match: YFNG_BACSU (Putative sugar dehydratase/epimerase yfnG OS=Bacillus subtilis GN=yfnG PE=3 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 4.268e-11 Identity = 67/261 (25.67%), Postives = 111/261 (42.53%), Query Frame = 3 Query: 117 KNILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFDAVIHFAGLKAVGESVQKPLLYFDNNLIGTITLLEVMAAHG-CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFN----PVGAHPSGKIGEDPRGIPNNLMPFVTQIAV-GRRPNLTVFGNDYSKKEGTGVREYIHVNKHN*RAKLLALQKPED 881 KN+ VTG G +GS+ V +L+ G N+ V + G M + L D A +E + + D V H A VG + + P+ F+ N++GT +LE H K ++ +SS YG + +P E PL+ +PY + + C D +I YF+ PV G + N ++P Q+ + G P + + +GT VR+Y ++ + +A LL +K E+ Sbjct: 7 KNVFVTGCTGLLGSYLVKELIEQGA------NVTGLVRDHVPQSNLYQGEHIKKMNIVRGSLEDLAVIERALGEYEIDTVFHLAAQAIVGVANRNPISTFEANILGTWNILEACRKHPLIKRVIVASSDKAYGDQENLPYDENMPLQGKHPYD-----VSKSCAD---------LISHTYFHTYGLPVCITRCGNLYGGGDLNFNRIIPQTIQLVLNGEAPEI--------RSDGTFVRDYFYI-EDAVQAYLLLAEKMEE 238 The following BLAST results are available for this feature:
BLAST of DY305572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305572 ID=DY305572; Name=DY305572; organism=Citrus sinensis; type=EST; length=1292bpback to top |