DY305572
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305572 vs. ExPASy Swiss-Prot
Match: UXS1_XENTR (UDP-glucuronic acid decarboxylase 1 OS=Xenopus tropicalis GN=uxs1 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 4.268e-11 Identity = 61/227 (26.87%), Postives = 105/227 (46.26%), Query Frame = 3 Query: 117 KNILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFDAVIHFAGLKAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKVVPCTEEF-----PLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQIAVGRRPNLTVFGN 782 K IL+TGGAG++GSH +L++ G++ VVDN + V+ G++ + H + +E L+ + D + H A + + P+ N IGT+ +L + G + L+ +S++ VYG P+V P +EE+ P+ Y K E +C + + ++ + R FN G D R + N F+ Q G + LTV+G+ Sbjct: 90 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRK---RNVEHWIGHENFELINHDV-------VEPLYIEV--DQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR-LLLASTSEVYGDPEVHPQSEEYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGV-EVRVARIFNTFGPRMH---MNDGRVVSN----FILQALQGEQ--LTVYGS 293
BLAST of DY305572 vs. ExPASy Swiss-Prot
Match: RFFG_HAEIN (dTDP-glucose 4,6-dehydratase OS=Haemophilus influenzae GN=rffG PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 4.268e-11 Identity = 72/263 (27.38%), Postives = 118/263 (44.87%), Query Frame = 3 Query: 120 NILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIA-VAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFDAVIHFAGLKAVGESVQKPLLYFDNNLIGTITLLEVMAAH-----GCKNLVFS----SSATVYGWPKV--VPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQIAVGRRPNLTVFGNDYSKKEGTGVREYIHVNKHN*RAKLLALQK 872 NILVTGG+G+IGS + ++ + V N+D + A + ++E+ N F K+D+ D +E +F K + DAV+H A V S+ + N++GT TLLEV + K F S+ VYG + TE+ P +PY +K + + HR+ +I+ N GA+ + L+P + AV +P L ++G +G +R+++ V H +A L L K Sbjct: 3 NILVTGGSGFIGSALIRYII--NHTQDFVINIDKLTYAANQSALREVENNP--RYVFEKVDICDLNVIENIFEKYQPDAVMHLAAESHVDRSISGAADFVQTNIVGTYTLLEVAKNYWHTLDEAKKTTFRFHHISTDEVYGDLSLSEPAFTEQSPYHPSSPYSASKAASNHLVQAWHRTYG-LPVIITNSSNNYGAYQHAE----------KLIPLMISNAVMGKP-LPIYG------DGQQIRDWLFVEDHV-QASYLVLTK 242
BLAST of DY305572 vs. ExPASy Swiss-Prot
Match: LPSL_RHIME (UDP-glucuronate 5'-epimerase OS=Rhizobium meliloti GN=lspL PE=3 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 5.574e-11 Identity = 44/157 (28.03%), Postives = 79/157 (50.32%), Query Frame = 3 Query: 126 LVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFDAVIHFAGLKAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKNLVFSSSATVYGWPKVVPCTE-EFPLEAMNPYGRTKLFIE 593 L+TG AG+IG H +L+ G+ V D + ++ + + + + + L D+AAL+ + + +IH A V S++ P Y D NL+G+ +LE+ A K+L+ +S++++YG + +P E + E M Y TK +E Sbjct: 4 LITGTAGFIGFHVAKRLIDEGHFVVGFDGMTPYYDVTLKERRHAILQRSNGFKAVTAMLEDRAALDRAAELAEPEVIIHLAAQAGVRYSLENPKAYVDANLVGSWNMLELAKAIAPKHLMLASTSSIYGANEKIPFAEADRADEPMTLYAATKKSME 160
BLAST of DY305572 vs. ExPASy Swiss-Prot
Match: GAE1_ARATH (UDP-glucuronate 4-epimerase 1 OS=Arabidopsis thaliana GN=GAE1 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 5.574e-11 Identity = 52/163 (31.90%), Postives = 86/163 (52.76%), Query Frame = 3 Query: 120 NILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKE-LAGNQGDNMTFHKLDLRDKAALEALFAKTKFDAVIHFAGLKAVGESVQKPLLYFDNNLIGTITLLEV-MAAHGCKNLVFSSSATVYGWPKVVPCTE-EFPLEAMNPYGRTKLFIEEI 599 ++LVTG G++GSH L L G V +DN +N + ++ + + L ++G + + DL D L LF F V+H A V +++ P Y +N+ G + LLE+ AA+ +V++SS++VYG + VP +E + + + Y TK EEI Sbjct: 89 SVLVTGATGFVGSHVSLALRKRGDGVVGLDNFNNYYDPSLKRARRSLLSSRGIFVV--EGDLNDAKLLAKLFDVVAFTHVMHLAAQAGVRYALENPQSYVHSNIAGLVNLLEICKAANPQPAIVWASSSSVYGLNEKVPFSESDRTDQPASLYAATKKAGEEI 249
BLAST of DY305572 vs. ExPASy Swiss-Prot
Match: RFBB_XANCP (dTDP-glucose 4,6-dehydratase OS=Xanthomonas campestris pv. campestris GN=rfbB PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 7.280e-11 Identity = 70/249 (28.11%), Postives = 109/249 (43.78%), Query Frame = 3 Query: 126 LVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFDAVIHFAGLKAVGESVQKPLLYFDNNLIGTITLLEVM---------AAHGCKNLVFSSSATVYG-WPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPV-GAHPSGKIGEDPRGIPNNLMPFVTQIAVGRRPNLTVFGNDYSKKEGTGVREYIHVNKH 839 LVTG AG+IG + VL+ + G + V +D L A + + L GN + F K D+ D A + L + + DAV++FA V S++ P + N++GT+ LLE + + S+ VYG + TE P +PY +K + + R H + Y PV + S G P P L+P V A+ P L V+G +G VR+++ V+ H Sbjct: 5 LVTGRAGFIGGNFVLEAVSRGIRVVNLDALTYAGNLNT--LASLEGNA--DHIFVKGDIGDGALVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPDTRRDAFRFLHVSTDEVYGTLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHT----------YGLPVLTTNCSNNYG--PYHFPEKLIPLVIAKALAGEP-LPVYG------DGKQVRDWLFVSDH 230
BLAST of DY305572 vs. ExPASy Swiss-Prot
Match: RFBB_NEIMB (dTDP-glucose 4,6-dehydratase OS=Neisseria meningitidis serogroup B GN=rfbB1 PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 7.280e-11 Identity = 73/254 (28.74%), Postives = 110/254 (43.31%), Query Frame = 3 Query: 117 KNILVTGGAGYIGSHTVLQLLLGGYKTVV-VDNLDNASEIAVAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFDAVIHFAGLKAVGESVQKPLLYFDNNLIGTITLLEVMAA---------HGCKNLVFSSSATVYGWPKVVP--CTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNP-VGAHPSGKIGEDPRGIPNNLMPFVTQIAVGRRPNLTVFGNDYSKKEGTGVREYIHVNKH 839 + ILVTGGAG+IGS V ++ VV VD L A + + E+A N F ++D+ D+A L+ +FA+ + DAV+H A V S+ + N++GT LLE A H S+ VYG TE P +PY +K + + R W L Y P + + S G P P L+P + A+ +P L V+G +G +R+++ V H Sbjct: 2 RKILVTGGAGFIGSAVVRHIIRNTRDAVVNVDKLTYAGNLE--SLTEVADNP--RYAFEQVDICDRAELDRVFAQYRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQQMPSEQHEAFRFHHISTDEVYGDLGGTDDLFTETAPYAPSSPYSASKASSDHLVR-------AW---LRTYGLPTIVTNCSNNYG--PYHFPEKLIPLMILNALDGKP-LPVYG------DGMQIRDWLFVEDH 232
BLAST of DY305572 vs. ExPASy Swiss-Prot
Match: RFBB_NEIMA (dTDP-glucose 4,6-dehydratase OS=Neisseria meningitidis serogroup A GN=rfbB1 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 9.508e-11 Identity = 71/254 (27.95%), Postives = 111/254 (43.70%), Query Frame = 3 Query: 117 KNILVTGGAGYIGSHTVLQLLLGGYKTVVVDNLDNASEIA-VAKVKELAGNQGDNMTFHKLDLRDKAALEALFAKTKFDAVIHFAGLKAVGESVQKPLLYFDNNLIGTITLLEVMAA---------HGCKNLVFSSSATVYGWPKVVP--CTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNP-VGAHPSGKIGEDPRGIPNNLMPFVTQIAVGRRPNLTVFGNDYSKKEGTGVREYIHVNKH 839 + ILVTGGAG+IGS V ++ +VV NLD + + + ++A N F ++D+ D+A L+ +FA+ + DAV+H A V S+ + N++GT LLE A H S+ VYG TE P +PY +K + + R W L Y P + + S G P P L+P + A+ +P L V+G +G +R+++ V H Sbjct: 2 RKILVTGGAGFIGSAVVRHIIRNTQDSVV--NLDKLTYAGNLESLTDIADNP--RYAFEQVDICDRAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYRQQMPSEKHEAFRFHHISTDEVYGDLSGTDDLFTETAPYAPSSPYSASKASSDHLVR-------AW---LRTYGLPTIVTNCSNNYG--PYHFPEKLIPLMILNALDGKP-LPVYG------DGMQIRDWLFVEDH 232 The following BLAST results are available for this feature:
BLAST of DY305572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY305572 ID=DY305572; Name=DY305572; organism=Citrus sinensis; type=EST; length=1292bpback to top |