DY305567
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305567 vs. ExPASy Swiss-Prot
Match: ISPG_CHLAB (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydophila abortus GN=ispG PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 3.106e-27 Identity = 58/108 (53.70%), Postives = 72/108 (66.67%), Query Frame = 3 Query: 471 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPAKIDLYVGKTVVKRGNSMDYA 794 + P +R+ +F LQ +R KTEY+SCP CGRTLFDL E++ I E+T HL G+ IA+MGCIVNGPGEMADADFG+VG +DLYV T VK M+ A Sbjct: 481 DLPNIPLSTVREIAFGTLQSAGVRLVKTEYISCPGCGRTLFDLPEVTKRIHERTQHLVGLKIAVMGCIVNGPGEMADADFGFVGSKTGMVDLYVKHTCVKAHIPMEQA 588
BLAST of DY305567 vs. ExPASy Swiss-Prot
Match: ISPG_PORGI (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Porphyromonas gingivalis GN=ispG PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 5.297e-27 Identity = 56/95 (58.95%), Postives = 71/95 (74.74%), Query Frame = 3 Query: 510 SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPAKIDLYVGKTVVKRGNSMDYA 794 +F +LQ R+R ++TEY+SCPSCGRTL++LQE A I+ T+HL + I IMGCIVNGPGEMADAD+GYVG P +IDLY K V+RG + A Sbjct: 470 AFGILQATRLRMSRTEYISCPSCGRTLYNLQETVARIKAATAHLKELKIGIMGCIVNGPGEMADADYGYVGAGPGRIDLYKQKICVRRGIPQEQA 564
BLAST of DY305567 vs. ExPASy Swiss-Prot
Match: ISPG_PROMM (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Prochlorococcus marinus (strain MIT 9313) GN=ispG PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.901e-27 Identity = 50/87 (57.47%), Postives = 68/87 (78.16%), Query Frame = 3 Query: 513 FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPAKIDLYVGKTVVKR 773 +++LQ +R T EY+SCPSCGRTLF+L+E+ ++R+ TSHL G+ IA+MGCIVNGPGEMADAD+GYVG P I LY G+ +++ Sbjct: 296 YSILQSIGLRKTMVEYISCPSCGRTLFNLEEVVQKVRDSTSHLVGLDIAVMGCIVNGPGEMADADYGYVGKGPGVISLYRGRDEIRK 382 HSP 2 Score: 24.6386 bits (52), Expect = 8.901e-27 Identity = 10/15 (66.67%), Postives = 10/15 (66.67%), Query Frame = 2 Query: 803 LIQLINDPRAWSDPP 847 LIQLI D W DPP Sbjct: 392 LIQLIKDDGRWVDPP 406
BLAST of DY305567 vs. ExPASy Swiss-Prot
Match: ISPG_CHLTR (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydia trachomatis GN=ispG PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.541e-26 Identity = 59/96 (61.46%), Postives = 66/96 (68.75%), Query Frame = 3 Query: 486 DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPAKIDLYVGKTVVK 770 D R F +LQ +R+ EYVSCP CGRTLFDL +S IRE+T HLPG + IA+MGCIVNGPGEMADADFGYVG P IDLYV VK Sbjct: 481 DIKLSRTLGFLILQSANIRSVTVEYVSCPGCGRTLFDLLAVSQRIRERTQHLPGGLKIAVMGCIVNGPGEMADADFGYVGSKPGMIDLYVKHKCVK 576
BLAST of DY305567 vs. ExPASy Swiss-Prot
Match: ISPG_CHLTB (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=ispG PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.541e-26 Identity = 59/96 (61.46%), Postives = 66/96 (68.75%), Query Frame = 3 Query: 486 DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPAKIDLYVGKTVVK 770 D R F +LQ +R+ EYVSCP CGRTLFDL +S IRE+T HLPG + IA+MGCIVNGPGEMADADFGYVG P IDLYV VK Sbjct: 481 DIKLSRTLGFLILQSANIRSVTVEYVSCPGCGRTLFDLLAVSQRIRERTKHLPGGLKIAVMGCIVNGPGEMADADFGYVGSKPGMIDLYVKHKCVK 576
BLAST of DY305567 vs. ExPASy Swiss-Prot
Match: ISPG_CHLTA (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=ispG PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.541e-26 Identity = 59/96 (61.46%), Postives = 66/96 (68.75%), Query Frame = 3 Query: 486 DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPAKIDLYVGKTVVK 770 D R F +LQ +R+ EYVSCP CGRTLFDL +S IRE+T HLPG + IA+MGCIVNGPGEMADADFGYVG P IDLYV VK Sbjct: 481 DIKLSRTLGFLILQSANIRSVTVEYVSCPGCGRTLFDLLAVSQRIRERTQHLPGGLKIAVMGCIVNGPGEMADADFGYVGSKPGMIDLYVKHKCVK 576
BLAST of DY305567 vs. ExPASy Swiss-Prot
Match: ISPG_CHLT2 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=ispG PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.541e-26 Identity = 59/96 (61.46%), Postives = 66/96 (68.75%), Query Frame = 3 Query: 486 DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPAKIDLYVGKTVVK 770 D R F +LQ +R+ EYVSCP CGRTLFDL +S IRE+T HLPG + IA+MGCIVNGPGEMADADFGYVG P IDLYV VK Sbjct: 481 DIKLSRTLGFLILQSANIRSVTVEYVSCPGCGRTLFDLLAVSQRIRERTKHLPGGLKIAVMGCIVNGPGEMADADFGYVGSKPGMIDLYVKHKCVK 576
BLAST of DY305567 vs. ExPASy Swiss-Prot
Match: ISPG_BACTN (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bacteroides thetaiotaomicron GN=ispG PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.541e-26 Identity = 55/89 (61.80%), Postives = 67/89 (75.28%), Query Frame = 3 Query: 507 TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPAKIDLYVGKTVVKR 773 T+F +LQ R R +KTEY+SCP CGRTL+DL++ A I+ TSHL G+ I IMGCIVNGPGEMADAD+GYVG KI LY GK V++ Sbjct: 501 TAFGILQAGRTRTSKTEYISCPGCGRTLYDLEKTIARIKAATSHLKGLKIGIMGCIVNGPGEMADADYGYVGAGRGKISLYKGKVCVEK 589
BLAST of DY305567 vs. ExPASy Swiss-Prot
Match: ISPG_BACFN (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=ispG PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.541e-26 Identity = 70/160 (43.75%), Postives = 90/160 (56.25%), Query Frame = 3 Query: 297 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGSNXXXXXXXXXXXXXXXEAPGQDFDFLRD-TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPAKIDLYVGKTVVKR 773 RV R L L+ L PVI + +DL I AG++ G+ + D T+F +LQ R+R +KTEY+SCP CGRTLF+LQ A ++E TSHL G+ I IMGCIVNGPGEMADAD+GYVG KI LY K +++ Sbjct: 431 RVGEHRALAHQLTVEGLQNPVIFFQHYAEDT-AEDLQIKAGADMGALIFDGLCDGIYLFNQGKLSHAVIDATAFGILQAGRIRTSKTEYISCPGCGRTLFNLQSTIARVKEATSHLKGLKIGIMGCIVNGPGEMADADYGYVGAGRGKISLYKQKECIEK 589
BLAST of DY305567 vs. ExPASy Swiss-Prot
Match: ISPG_BACFR (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bacteroides fragilis GN=ispG PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 2.013e-26 Identity = 69/160 (43.12%), Postives = 90/160 (56.25%), Query Frame = 3 Query: 297 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGSNXXXXXXXXXXXXXXXEAPGQDFDFLRD-TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPAKIDLYVGKTVVKR 773 RV R L L+ L PVI + +DL + AG++ G+ + D T+F +LQ R+R +KTEY+SCP CGRTLF+LQ A ++E TSHL G+ I IMGCIVNGPGEMADAD+GYVG KI LY K +++ Sbjct: 431 RVGEHRALAHQLTVEGLQNPVIFFQHYAEDT-AEDLQVKAGADMGALIFDGLCDGIYLFNQGKLSHAVIDATAFGILQAGRIRTSKTEYISCPGCGRTLFNLQSTIARVKEATSHLKGLKIGIMGCIVNGPGEMADADYGYVGAGRGKISLYKQKECIEK 589 The following BLAST results are available for this feature:
BLAST of DY305567 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305567 ID=DY305567; Name=DY305567; organism=Citrus sinensis; type=EST; length=1250bpback to top |