DY305567
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305567 vs. ExPASy Swiss-Prot
Match: ISPG_SYNJB (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus sp. GN=ispG PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.325e-26 Identity = 56/101 (55.45%), Postives = 71/101 (70.30%), Query Frame = 3 Query: 471 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPAKIDLYVGKTVVKR 773 EAP ++ ++ +LQ +R T EYV+CPSCGRTLF+L+E+ ++R T HL G+ IA+MGCIVNGPGEMADAD+GYVG P I LY GK VKR Sbjct: 286 EAPEKEIP----VAYGILQALNLRKTMVEYVACPSCGRTLFNLEEVLQKVRAATQHLVGLDIAVMGCIVNGPGEMADADYGYVGKTPGVISLYRGKEEVKR 382 HSP 2 Score: 21.557 bits (44), Expect = 3.325e-26 Identity = 9/17 (52.94%), Postives = 9/17 (52.94%), Query Frame = 2 Query: 797 QCLIQLINDPRAWSDPP 847 Q LI LI W DPP Sbjct: 390 QALIDLIKADGRWVDPP 406
BLAST of DY305567 vs. ExPASy Swiss-Prot
Match: ISPG_CHLTE (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlorobium tepidum GN=ispG PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 3.434e-26 Identity = 52/86 (60.47%), Postives = 68/86 (79.07%), Query Frame = 3 Query: 513 FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPAKIDLYVGKTVVK 770 FN+LQ R+R +KTE++SCP CGRT F+L++ +A I+++ SHL G+ I IMGCIVNGPGEMADADFGYVG ++ LYVGK V+ Sbjct: 635 FNILQAARIRMSKTEFISCPGCGRTYFELEKTTALIKQRVSHLKGLKIGIMGCIVNGPGEMADADFGYVGSGKGRVSLYVGKECVE 720
BLAST of DY305567 vs. ExPASy Swiss-Prot
Match: ISPG_SYNJA (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus sp. (strain JA-3-3Ab) GN=ispG PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 4.328e-26 Identity = 55/101 (54.46%), Postives = 71/101 (70.30%), Query Frame = 3 Query: 471 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPAKIDLYVGKTVVKR 773 EAP ++ ++ +LQ +R T EYV+CPSCGRTLF+L+E+ ++R T HL G+ IA+MGCIVNGPGEMADAD+GYVG P I LY GK VK+ Sbjct: 286 EAPEKEIP----VAYGILQALNLRKTMVEYVACPSCGRTLFNLEEVLQKVRAATQHLVGLDIAVMGCIVNGPGEMADADYGYVGKTPGYISLYRGKEEVKK 382 HSP 2 Score: 22.3274 bits (46), Expect = 4.328e-26 Identity = 9/17 (52.94%), Postives = 10/17 (58.82%), Query Frame = 2 Query: 797 QCLIQLINDPRAWSDPP 847 Q LI+LI W DPP Sbjct: 390 QALIELIKADGRWVDPP 406
BLAST of DY305567 vs. ExPASy Swiss-Prot
Match: ISPG_PARD8 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=ispG PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 4.485e-26 Identity = 56/85 (65.88%), Postives = 64/85 (75.29%), Query Frame = 3 Query: 513 FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPAKIDLYVGKTVV 767 F +LQ R R +KTEY+SCPSCGRTL+DLQ A I+E TSHL G+ I IMGCIVNGPGEMADAD+GYVG +I LY GK V Sbjct: 502 FGILQATRTRISKTEYISCPSCGRTLYDLQTTIARIKEATSHLKGLKIGIMGCIVNGPGEMADADYGYVGAGRGQISLYKGKECV 586
BLAST of DY305567 vs. ExPASy Swiss-Prot
Match: ISPG_BACV8 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=ispG PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 7.650e-26 Identity = 55/96 (57.29%), Postives = 68/96 (70.83%), Query Frame = 3 Query: 507 TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPAKIDLYVGKTVVKRGNSMDYA 794 T+F +LQ R+R +KTEY+SCP CGRTL+DL+ A I+ TSHL G+ I IMGCIVNGPGEMADAD+GYVG KI LY K +++ D A Sbjct: 502 TAFGILQAGRIRTSKTEYISCPGCGRTLYDLESTIARIKTATSHLKGLKIGIMGCIVNGPGEMADADYGYVGAGRGKISLYKKKECIEKNIPEDQA 597
BLAST of DY305567 vs. ExPASy Swiss-Prot
Match: ISPG_ANAVT (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=ispG PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.704e-25 Identity = 51/87 (58.62%), Postives = 67/87 (77.01%), Query Frame = 3 Query: 513 FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPAKIDLYVGKTVVKR 773 +++LQ +R T EYV+CPSCGRTLF+L+E+ ++RE T HL G+ IA+MGCIVNGPGEMADAD+GYVG P I LY G+ +K+ Sbjct: 299 YSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHKVRESTKHLTGLDIAVMGCIVNGPGEMADADYGYVGKTPGYISLYRGREEIKK 385
BLAST of DY305567 vs. ExPASy Swiss-Prot
Match: ISPG_ANASP (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Anabaena sp. (strain PCC 7120) GN=ispG PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.704e-25 Identity = 51/87 (58.62%), Postives = 67/87 (77.01%), Query Frame = 3 Query: 513 FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPAKIDLYVGKTVVKR 773 +++LQ +R T EYV+CPSCGRTLF+L+E+ ++RE T HL G+ IA+MGCIVNGPGEMADAD+GYVG P I LY G+ +K+ Sbjct: 299 YSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHKVRESTKHLTGLDIAVMGCIVNGPGEMADADYGYVGKTPGYISLYRGREEIKK 385
BLAST of DY305567 vs. ExPASy Swiss-Prot
Match: ISPG_THEEB (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Thermosynechococcus elongatus (strain BP-1) GN=ispG PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 2.226e-25 Identity = 52/87 (59.77%), Postives = 67/87 (77.01%), Query Frame = 3 Query: 513 FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPAKIDLYVGKTVVKR 773 + +LQ +R T EYV+CPSCGRTLF+L+E+ ++RE T HL G++IA+MGCIVNGPGEMADAD+GYVG P I LY G+ VK+ Sbjct: 293 YGILQALGLRRTMVEYVACPSCGRTLFNLEEVLHKVREATKHLTGLNIAVMGCIVNGPGEMADADYGYVGKQPGYISLYRGREEVKK 379
BLAST of DY305567 vs. ExPASy Swiss-Prot
Match: ISPG_NOSP7 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=ispG PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 2.226e-25 Identity = 51/87 (58.62%), Postives = 67/87 (77.01%), Query Frame = 3 Query: 513 FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPAKIDLYVGKTVVKR 773 +++LQ +R T EYV+CPSCGRTLF+L+E+ ++RE T HL G+ IA+MGCIVNGPGEMADAD+GYVG P I LY G+ +K+ Sbjct: 299 YSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHKVREATKHLTGLDIAVMGCIVNGPGEMADADYGYVGKTPGYISLYRGREEIKK 385
BLAST of DY305567 vs. ExPASy Swiss-Prot
Match: ISPG_SYNPX (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus sp. (strain WH8102) GN=ispG PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 3.796e-25 Identity = 50/87 (57.47%), Postives = 68/87 (78.16%), Query Frame = 3 Query: 513 FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPAKIDLYVGKTVVKR 773 +++LQ +R T EYV+CPSCGRTLF+L+E+ ++R+ TSHL G+ IA+MGCIVNGPGEMADAD+GYVG P I LY G+ +++ Sbjct: 288 YSILQSLGLRKTMVEYVACPSCGRTLFNLEEVLHKVRDATSHLTGLDIAVMGCIVNGPGEMADADYGYVGKTPGVISLYRGRDEIRK 374 The following BLAST results are available for this feature:
BLAST of DY305567 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY305567 ID=DY305567; Name=DY305567; organism=Citrus sinensis; type=EST; length=1250bpback to top |