DY305566

Overview
NameDY305566
Unique NameDY305566
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1246
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305566 vs. ExPASy Swiss-Prot
Match: GPX1_ARATH (Phospholipid hydroperoxide glutathione peroxidase 1, chloroplastic OS=Arabidopsis thaliana GN=GPX1 PE=1 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 1.134e-37
Identity = 74/110 (67.27%), Postives = 85/110 (77.27%), Query Frame = 1
Query:  514 RSGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSSSWWIGKGKVLNVMPP 843
            R GLT+SNY+ELS LY+KYK QG EILAFPCNQFG QEPG N +I++FACTRFKAEFPIFDKVDVNG + AP+Y+ LKS+ GG  G  IKWNF       KGKV+   PP
Sbjct:  110 RCGLTSSNYSELSHLYEKYKTQGFEILAFPCNQFGFQEPGSNSEIKQFACTRFKAEFPIFDKVDVNGPSTAPIYEFLKSNAGGFLGGLIKWNFEKFLIDKKGKVVERYPP 219          
BLAST of DY305566 vs. ExPASy Swiss-Prot
Match: GPX4_HELAN (Probable phospholipid hydroperoxide glutathione peroxidase OS=Helianthus annuus GN=GPXHA-2 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 2.526e-37
Identity = 74/108 (68.52%), Postives = 84/108 (77.78%), Query Frame = 1
Query:  520 GLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSSSWWIGKGKVLNVMPP 843
            G TNSNY EL+ LY KYK+QG EILAFPCNQFG QEPG NE+IQ FACTRFKAE+P+F KV+VNG  A PLYK LKSSKGG  GDSIKWNF+      +GKV++   P
Sbjct:   55 GFTNSNYPELTTLYQKYKDQGFEILAFPCNQFGGQEPGSNEEIQVFACTRFKAEYPVFSKVNVNGKEADPLYKFLKSSKGGFLGDSIKWNFTKFLVDREGKVVDRYAP 162          
BLAST of DY305566 vs. ExPASy Swiss-Prot
Match: GPX2_ARATH (Probable glutathione peroxidase 2 OS=Arabidopsis thaliana GN=GPX2 PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 9.599e-37
Identity = 74/110 (67.27%), Postives = 86/110 (78.18%), Query Frame = 1
Query:  514 RSGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSSSWWIGKGKVLNVMPP 843
            + GLT++NY EL+ LY+KYK QGLEILAFPCNQF  QEPG+NE+IQ+  CTRFKAEFPIFDKVDVNG N APLYK+LK+ KGGL  D+IKWNF+       GKVL    P
Sbjct:   40 KCGLTDANYKELNVLYEKYKEQGLEILAFPCNQFLGQEPGNNEEIQQTVCTRFKAEFPIFDKVDVNGKNTAPLYKYLKAEKGGLLIDAIKWNFTKFLVSPDGKVLQRYSP 149          
BLAST of DY305566 vs. ExPASy Swiss-Prot
Match: GPX8_ARATH (Probable glutathione peroxidase 8 OS=Arabidopsis thaliana GN=GPX8 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 2.793e-36
Identity = 70/119 (58.82%), Postives = 92/119 (77.31%), Query Frame = 1
Query:  514 RSGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSSSWWIGKGKVLNVMPP---PQTSEH 861
            + G+TNSNYTEL++LY++YK++GLEILAFPCNQFG +EPG N+QI +F CTRFK+EFPIF+K++VNG+NA+PLYK LK  K G+FGD I+WNF+       G+ +    P   P T EH
Sbjct:   40 KCGMTNSNYTELNELYNRYKDKGLEILAFPCNQFGDEEPGTNDQITDFVCTRFKSEFPIFNKIEVNGENASPLYKFLKKGKWGIFGDDIQWNFAKFLVDKNGQAVQRYYPTTSPLTLEH 158          
BLAST of DY305566 vs. ExPASy Swiss-Prot
Match: GPX3_ARATH (Probable glutathione peroxidase 3, mitochondrial OS=Arabidopsis thaliana GN=GPX3 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 3.775e-33
Identity = 66/110 (60.00%), Postives = 80/110 (72.73%), Query Frame = 1
Query:  514 RSGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSSSWWIGKGKVLNVMPP 843
            + GLT+ NY E++ LY KYK QG EILAFPCNQFG+QEPG N +I+E  C  FKAEFPIFDK++VNG N  PLY  LK  KGGLFGD+IKWNF+      +G V++   P
Sbjct:   79 KCGLTHGNYKEMNILYAKYKTQGFEILAFPCNQFGSQEPGSNMEIKETVCNIFKAEFPIFDKIEVNGKNTCPLYNFLKEQKGGLFGDAIKWNFAKFLVDRQGNVVDRYAP 188          
BLAST of DY305566 vs. ExPASy Swiss-Prot
Match: GPX1_HELAN (Glutathione peroxidase 1 OS=Helianthus annuus GN=GPXHA-1 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.694e-32
Identity = 61/94 (64.89%), Postives = 78/94 (82.98%), Query Frame = 1
Query:  514 RSGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFS 795
            + GLTN++Y EL+Q+Y KYK +G EILAFPCNQFG QEPG NE+I +F CT+FK+EFPIFDK+DVNG+NAAP+Y+ LK+   G+ G  I+WNFS
Sbjct:   40 KCGLTNNSYDELNQIYLKYKEKGFEILAFPCNQFGQQEPGTNEEIVDFVCTKFKSEFPIFDKIDVNGENAAPVYEFLKTGFYGILGGDIQWNFS 133          

HSP 2 Score: 21.1718 bits (43), Expect = 1.694e-32
Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 3
Query:  795 QFLVDREGKGVERYAP 842
            +FLVD+ G+ V+ Y P
Sbjct:  134 KFLVDKNGQPVDCYYP 149          
BLAST of DY305566 vs. ExPASy Swiss-Prot
Match: GPX5_ARATH (Probable glutathione peroxidase 5 OS=Arabidopsis thaliana GN=GPX5 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.028e-30
Identity = 63/107 (58.88%), Postives = 82/107 (76.64%), Query Frame = 1
Query:  514 RSGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSSSWWIGK-GKVLN 831
            + G T SNYT+L++LY KYK+QG  +LAFPCNQF +QEPG +E+  +FACTRFKAE+P+F KV VNG NAAP+YK LKS K    G  IKWNF + + +GK G+V++
Sbjct:   45 KCGFTESNYTQLTELYRKYKDQGFVVLAFPCNQFLSQEPGTSEEAHQFACTRFKAEYPVFQKVRVNGQNAAPVYKFLKSKKPSFLGSRIKWNF-TKFLVGKDGQVID 150          
BLAST of DY305566 vs. ExPASy Swiss-Prot
Match: GPX4_ARATH (Probable glutathione peroxidase 4 OS=Arabidopsis thaliana GN=GPX4 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 3.307e-29
Identity = 60/101 (59.41%), Postives = 76/101 (75.25%), Query Frame = 1
Query:  514 RSGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSSSWWIGK 816
            + G T +NYT+L++LY KYK+Q  EILAFPCNQF  QEPG +++  EFAC RFKAE+P+F KV VNG NAAP+YK LK+SK    G  IKWNF + + +GK
Sbjct:   43 KCGFTETNYTQLTELYRKYKDQDFEILAFPCNQFLYQEPGTSQEAHEFACERFKAEYPVFQKVRVNGQNAAPIYKFLKASKPTFLGSRIKWNF-TKFLVGK 142          
BLAST of DY305566 vs. ExPASy Swiss-Prot
Match: GPX2_CAEEL (Probable glutathione peroxidase R05H10.5 OS=Caenorhabditis elegans GN=R05H10.5 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.551e-26
Identity = 55/92 (59.78%), Postives = 63/92 (68.48%), Query Frame = 1
Query:  520 GLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFS 795
            GLTNSNY +  +L D YK  GLE+LAFPCNQFG QEP     I  F   +FK E  +F K+DVNGDN APLYK LK  KGG   D+IKWNF+
Sbjct:   37 GLTNSNYNQFKELLDVYKKDGLEVLAFPCNQFGGQEPSCEIDIAAFVADKFKFEPTLFQKIDVNGDNTAPLYKFLKQEKGGFLVDAIKWNFT 128          

HSP 2 Score: 21.1718 bits (43), Expect = 1.551e-26
Identity = 7/16 (43.75%), Postives = 13/16 (81.25%), Query Frame = 3
Query:  795 QFLVDREGKGVERYAP 842
            +FLV R+G  ++R++P
Sbjct:  129 KFLVGRDGHVIKRFSP 144          
BLAST of DY305566 vs. ExPASy Swiss-Prot
Match: GPX1_CAEEL (Probable glutathione peroxidase F26E4.12 OS=Caenorhabditis elegans GN=F26E4.12 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 7.624e-26
Identity = 56/108 (51.85%), Postives = 69/108 (63.89%), Query Frame = 1
Query:  520 GLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSSSWWIGKGKVLNVMPP 843
            GLTN NYT+L +L D YK  GLE+LAFPCNQF  QEP     IQ F   +FK E  +F K+DVNGD  +PL+K LK+ KGG   D+IKWNF+       GK++    P
Sbjct:   37 GLTNKNYTQLKELLDVYKKDGLEVLAFPCNQFAGQEPSCEIDIQAFVADKFKFEPTLFQKIDVNGDKQSPLFKFLKNEKGGFMFDAIKWNFTKFLVGRDGKIIKRFGP 144          
The following BLAST results are available for this feature:
BLAST of DY305566 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
GPX1_ARATH1.134e-3767.27Phospholipid hydroperoxide glutathione peroxidase ... [more]
GPX4_HELAN2.526e-3768.52Probable phospholipid hydroperoxide glutathione pe... [more]
GPX2_ARATH9.599e-3767.27Probable glutathione peroxidase 2 OS=Arabidopsis t... [more]
GPX8_ARATH2.793e-3658.82Probable glutathione peroxidase 8 OS=Arabidopsis t... [more]
GPX3_ARATH3.775e-3360.00Probable glutathione peroxidase 3, mitochondrial O... [more]
GPX1_HELAN1.694e-3264.89Glutathione peroxidase 1 OS=Helianthus annuus GN=G... [more]
GPX5_ARATH1.028e-3058.88Probable glutathione peroxidase 5 OS=Arabidopsis t... [more]
GPX4_ARATH3.307e-2959.41Probable glutathione peroxidase 4 OS=Arabidopsis t... [more]
GPX2_CAEEL1.551e-2659.78Probable glutathione peroxidase R05H10.5 OS=Caenor... [more]
GPX1_CAEEL7.624e-2651.85Probable glutathione peroxidase F26E4.12 OS=Caenor... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1BH05RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305566 ID=DY305566; Name=DY305566; organism=Citrus sinensis; type=EST; length=1246bp
GCTTAAACGAAATCTCGGAATCGCAACTTCCCTTATTTTGACAAGACATT
TCACTTCGAATTGTAAGCAAACCCTGTTGAGACCTTCGAAAAGTAATCCA
ATTTCTTTGGTTTCAAGGCCTTGTTTCTTCGCTTCTAGATCGGATCATAC
AATGGCAAGCCAATCGAAAACTTCAGTTCACGATTTCAGTGTTAAGGACG
CCAAGGGACAGGATGTTGATCTGAGCATCTACAAGGGAAAGCTTCTTTTG
ATTGTCAATGTTGCATCACAGTGGTATGCCTCAGCTCCTTTCATTTTTTA
CTTTTTTTTTTTTTTAAGTAATGATTCATTGATTATTGTTGATGCTTCCA
TTTAATTAACGCTAATACTCAGAAGCATGCATGCTTTCAATACAAATAAG
CATTTGTAGGAGATGATTTCACCCGGAGACTCTTTAATTCTTGCGCAGTG
CCGGCGACAGTTTTTTTTATTTTTTTTTCCTTTATCCGTTTTATTCATTT
ACCTGATTTTGAACGCAGTGGCTTGACCAATTCAAACTACACTGAGCTGA
GTCAGTTGTACGACAAGTACAAGAATCAAGGCTTGGAGATTCTGGCCTTT
CCTTGTAATCAGTTTGGAGCTCAAGAGCCAGGAGACAATGAACAGATTCA
AGAATTTGCATGCACTCGCTTTAAGGCTGAGTTTCCCATATTTGATAAGG
TTGATGTTAATGGTGATAATGCTGCTCCTTTATACAAGCATCTGAAATCC
AGCAAAGGTGGACTTTTTGGAGACAGCATCAAGTGGAACTTTTCCAGTTC
TTGGTGGATAGGGAAGGGAAAGGTGTTGAACGTTATGCCCCCCCCCCAAA
CCTCTGAACATTGAGGTAGTATAAAGATGTTTGGCTGGTAGTGGCGGTTG
CCCTTTCAATTTTAAGGAAAACTGGACGGTGGGTCTCATTTTATTCCTAA
AAAACTTATTTGGTTATTGGTTGTTACCCCCCTGCCGAAAGGAAAAAAAA
AACTTCCGGGAAACGGCTTAACCGCGGCTCCAACTTGCAGGGATCACCTT
CTTGTCAAAAAACAAAAAAAATCAGGCGGATAAAACCCCTCGGGGGGGGA
AAATTTGGTTTTAACTTTTGCCCCAAATTCGGAAAACCATTAAAGAAAAT
TTTCCCAAAAGCTGCAAAACAAATTTTCAGTGTGAAAAGTGGGCGTGGGT
TTGTTGTGGTTAGTAGGAGGATTGTCCCCCAAAATTTTTTAGTAGA
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