DY305552

Overview
NameDY305552
Unique NameDY305552
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1297
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305552 vs. ExPASy Swiss-Prot
Match: CALSB_ARATH (Callose synthase 11 OS=Arabidopsis thaliana GN=CALS11 PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 8.873e-41
Identity = 85/226 (37.61%), Postives = 129/226 (57.08%), Query Frame = 2
Query:    2 DDWTDWKRWMGNRGGIGIQPNRSWESWWDGELEHLKFSNIRGRILEIILVLRFFIYQYGIVYHLDIAHRSKNILVYGLSWXXXXXXXXXXKMVSMGRRRFGTDFQLMCTILKALLFLGFMSVMTDLFVICGLTISDLFATVLAFLPTGWALLLIGQVCRPLFKAIGFWDPIKELAKAYEYXXXXXXXXXXXXXSWFPFVSEFQTRLLFNQAFSRGLQISMILSGRK 679
            +D+ D+  W+ +RGG+  + ++SW +WW+ E EHLK + + G++LEIIL LRFF +QY IVYHL IA    +I VY +SW                ++R+     +    ++ L+ L  + V+  +     LT+ DL  ++LAF+PTGW L+ I QV +P   +   WD +  +A+ Y+              SW P     QTR+LFN+AFSRGLQIS+IL+G+K
Sbjct: 1541 NDFDDFIAWLWSRGGLFTKADQSWFTWWNEEQEHLKTTGVWGKLLEIILDLRFFFFQYSIVYHLRIAENRTSIGVYLISWGCIIGIVAIYITTIYAQKRYSVKEHIKYRFIQFLVILLTVLVVVMMLQFTKLTVVDLLISLLAFVPTGWGLISIAQVLKPFLLSTVVWDTVISVARFYDLFFGLIVMAPVALLSWLPGFQNMQTRILFNEAFSRGLQISIILAGKK 1766          
BLAST of DY305552 vs. ExPASy Swiss-Prot
Match: CALSC_ARATH (Callose synthase 12 OS=Arabidopsis thaliana GN=CALS12 PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 1.015e-36
Identity = 80/226 (35.40%), Postives = 122/226 (53.98%), Query Frame = 2
Query:    5 DWTDWKRWMGNRGGIGIQPNRSWESWWDGELEHLKFSNIRGRILEIILVLRFFIYQYGIVYHLDIAHRSKNILVYGLSWXXXXXXXXXXKMVSMGRRRFGTDFQLMCTILKALLFLGFMSVMTDLFVICGLTISDLFATVLAFLPTGWALLLIGQVCRPLFKAIG-FWDPIKELAKAYEYXXXXXXXXXXXXXSWFPFVSEFQTRLLFNQAFSRGLQISMILSGRK 679
            D+ D+  W+  +G I  +  +SWE WW  E +HL+ +   G  +EIILVLRFF +QYGIVY L IA+ S ++ VY  SW           ++   R ++     +   +++ LL +  + V+  L      +  D+F ++LAF+PTGW +LLI Q  R   K    FW+ +  +A+ Y+              SW P     QTR+LFN+AFSRGL+I  I++G+K
Sbjct: 1550 DFEDFMNWIWYQGRISTKSEQSWEKWWYEEQDHLRNTGKAGLFVEIILVLRFFFFQYGIVYQLKIANGSTSLFVYLFSWIYIFAIFVLFLVIQYARDKYSAKAHIRYRLVQFLLIVLAILVIVALLEFTHFSFIDIFTSLLAFIPTGWGILLIAQTQRKWLKNYTIFWNAVVSVARMYDILFGILIMVPVAFLSWMPGFQSMQTRILFNEAFSRGLRIMQIVTGKK 1775          
The following BLAST results are available for this feature:
BLAST of DY305552 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
CALSB_ARATH8.873e-4137.61Callose synthase 11 OS=Arabidopsis thaliana GN=CAL... [more]
CALSC_ARATH1.015e-3635.40Callose synthase 12 OS=Arabidopsis thaliana GN=CAL... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1BF08RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305552 ID=DY305552; Name=DY305552; organism=Citrus sinensis; type=EST; length=1297bp
GGATGATTGGACAGATTGGAAGAGGTGGATGGGAAATCGCGGTGGTATTG
GCATCCAGCCCAATAGAAGTTGGGAATCATGGTGGGATGGAGAACTAGAA
CACCTCAAATTCTCAAATATAAGGGGAAGAATTCTTGAGATTATCCTTGT
TCTTCGCTTCTTCATTTACCAGTATGGAATTGTCTACCACCTTGATATAG
CTCATCGCAGCAAGAATATTCTGGTGTATGGACTCTCTTGGCTAGTTCTA
GTAACCACTCTTCTAGTTCTGAAGATGGTATCAATGGGCAGACGAAGATT
TGGTACCGACTTTCAGCTCATGTGCACGATTCTCAAAGCACTCCTATTCC
TTGGCTTCATGTCAGTCATGACCGACTTGTTTGTAATATGCGGTCTCACC
ATATCAGATTTATTTGCCACTGTGCTTGCTTTTCTGCCTACTGGATGGGC
CCTTCTACTGATTGGGCAAGTTTGCAGGCCATTGTTCAAGGCAATAGGAT
TCTGGGATCCAATTAAGGAGCTTGCCAAAGCATATGAGTACATAATTGGA
TTTCTACTCTTTGCGGCCATAGCCATTTTATCATGGTTCCCATTCGTATC
TGAGTTCCAAACACGCCTGCTCTTCAATCAAGCATTCAGCAGAGGTCTCC
AGATTTCTATGATTCTCTCTGGTAGAAAAGATTAGACTGAGACAGCAAAA
AGTTGAAGTTAGTAGCATCACTCATCTTCATTTTTTTTTTTTTTAATTAC
CCTTACCGAAACCTATATTGTTTTGTAGTCATCATGTTGGAGTAAATAAC
TTCAGAAAATTCAACTTTGCTGATTTTCTTTTATATGTTTTTTTGAGAAA
ATTAGAAGCTGCTTTTCTGTCCCCACTTGATTCCTAAATTGGACCTAATA
ATATTGATTATTGGATTGGTCATGACTAACTTGGGTGGTATTTGATAGTG
AGAAGTAATAAAAAAAATTTTTCTTTTTAAAAAAAAAAAAAAAAAAACTG
GGGGGGGGGCCCCGGGACCCAATTTCCCCCTTAAGTGGAATCCAATTATA
AATTTCCTTGGCCGTCGTTTTTAACAACTTTGTGGAGTGGGGAAAAACCC
CGGACGTTATCCCCACTTATTTCCCTTTTGGCCCCCAATTCCCCCCTTCT
CTCCCCCGGGTGCTTTATAAACAGAAAAAGGGCCGCCCCACCATCCCCCC
CCCCCCCCAAACTTTTGTCCCCCCCCCCGGGGAAGGGGGAAGAAGGAGAG
AAAGGATGTATAAAGGCCCGTTTTAATATTTTTTTTTTATTAAAAAT
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