DY305549
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305549 vs. ExPASy Swiss-Prot
Match: ARFA_ORYSJ (Auxin response factor 1 OS=Oryza sativa subsp. japonica GN=ARF1 PE=2 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 9.430e-63 Identity = 110/166 (66.27%), Postives = 136/166 (81.93%), Query Frame = 2 Query: 233 DLYRELWKACAGPLVDVPKQGERVYYFPQGHMEQLEASTNQEL-NQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 724 +L+ ELW+ACAGPLV+VP++ ERV+YF QGH+EQL+ T+ L ++I +F++P KILC+VVN+ L AE ETDEV+AQITL P+P Q N PT PDP + PRP VHSF K+LT SDTSTHGGFSVLR+HA ECLPPLDM+ +TPTQEL+ KDLHG EWRFKHI+R Sbjct: 14 ELFAELWRACAGPLVEVPQRDERVFYFLQGHLEQLQEPTDPALLAEQIKMFQVPYKILCKVVNVELKAETETDEVFAQITLQPDPDQENLPTLPDPPLPEQPRPVVHSFCKILTPSDTSTHGGFSVLRRHANECLPPLDMSMATPTQELITKDLHGSEWRFKHIYR 179 HSP 2 Score: 29.6462 bits (65), Expect = 9.430e-63 Identity = 17/40 (42.50%), Postives = 22/40 (55.00%), Query Frame = 3 Query: 807 PKRHLLTPGWKYVLVLPKRLFAGGNFCGLENNK*PRGEKR 926 P+RHLLT GW V K+L +G F L + GE+R Sbjct: 182 PRRHLLTTGWS-TFVTSKKLISGDAFVYLRSE---TGEQR 217
BLAST of DY305549 vs. ExPASy Swiss-Prot
Match: ARFX_ORYSJ (Auxin response factor 24 OS=Oryza sativa subsp. japonica GN=ARF24 PE=2 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 1.899e-60 Identity = 115/182 (63.19%), Postives = 133/182 (73.08%), Query Frame = 2 Query: 230 DDLYRELWKACAGPLVDVPKQGERVYYFPQGHMEQLEASTNQELNQR-IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN----------------EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 724 D L+ ELW+ACAGPLV VP GERV+Y PQGH+EQ+EASTNQ Q+ PL+ LP KI C+V+N+ L AE +TDEVYAQ+TLLPE Q+ E P PA + RP+VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q PTQELVAKDLHG EWRF+HIFR Sbjct: 27 DGLFVELWRACAGPLVTVPAVGERVFYLPQGHIEQVEASTNQVAEQQGAPLYNLPWKIPCKVMNVELKAEPDTDEVYAQLTLLPEKQQDGNGSGNGNVSKDKVEEEEVVP---PAATERPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPTQELVAKDLHGVEWRFRHIFR 205 HSP 2 Score: 29.6462 bits (65), Expect = 1.899e-60 Identity = 20/42 (47.62%), Postives = 23/42 (54.76%), Query Frame = 3 Query: 807 PKRHLLTPGWKYVLVLPKRLFAGGNFCGL--ENNK*PRGEKR 926 P+RHLL GW V V KRL AG F L EN + G +R Sbjct: 208 PRRHLLQSGWS-VFVSAKRLVAGDAFIFLRGENGELRVGVRR 248
BLAST of DY305549 vs. ExPASy Swiss-Prot
Match: ARFN_ARATH (Putative auxin response factor 14 OS=Arabidopsis thaliana GN=ARF14 PE=3 SV=2) HSP 1 Score: 206.068 bits (523), Expect = 3.828e-52 Identity = 97/163 (59.51%), Postives = 124/163 (76.07%), Query Frame = 2 Query: 236 LYRELWKACAGPLVDVPKQGERVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 724 +Y +LWK CAGPL D+PK GE+VYYFPQGH+E +EAST +ELN+ P+ PSK+ CRV+ I L E +DE YA+ITL+P+ +Q T + + RP V+SF+KVLTASDTS HGGFSV +KHA ECLPPLDM+Q PTQE++A DLHG +WRF+HI+R Sbjct: 24 MYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPICDFPSKLQCRVIAIQLKVENNSDETYAEITLMPDTTQVVIPTQN---QNQFRPLVNSFTKVLTASDTSVHGGFSVPKKHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFRHIYR 183
BLAST of DY305549 vs. ExPASy Swiss-Prot
Match: ARFL_ARATH (Auxin response factor 12 OS=Arabidopsis thaliana GN=ARF12 PE=2 SV=2) HSP 1 Score: 199.134 bits (505), Expect = 1.078e-51 Identity = 97/169 (57.40%), Postives = 121/169 (71.60%), Query Frame = 2 Query: 236 LYRELWKACAGPLVDVPKQGERVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPE------PSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 724 +Y +LWK CAGPL D+PK GE+VYYFPQGH+E +E ST +ELN+ P+ LPSK+ CRV+ IHL E +DE YA+ITL+P+ P+QNE + RP V+SF+KVLTASDTS HGGF V +KHA ECLP LDM+Q P QEL+A DLHG +WRF H +R Sbjct: 24 VYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVETSTREELNELQPICDLPSKLQCRVIAIHLKVENNSDETYAEITLMPDTTQVVIPTQNE---------NQFRPLVNSFTKVLTASDTSAHGGFFVPKKHAIECLPSLDMSQPLPAQELLAIDLHGNQWRFNHNYR 183 HSP 2 Score: 26.9498 bits (58), Expect = 1.078e-51 Identity = 13/28 (46.43%), Postives = 16/28 (57.14%), Query Frame = 3 Query: 792 NEQVNPKRHLLTPGWKYVLVLPKRLFAG 875 N + P+RHLLT GW K+L AG Sbjct: 181 NYRGTPQRHLLTTGWN-AFTTSKKLVAG 207
BLAST of DY305549 vs. ExPASy Swiss-Prot
Match: ARFU_ARATH (Putative auxin response factor 21 OS=Arabidopsis thaliana GN=ARF21 PE=2 SV=2) HSP 1 Score: 197.208 bits (500), Expect = 5.743e-50 Identity = 95/166 (57.23%), Postives = 122/166 (73.49%), Query Frame = 2 Query: 236 LYRELWKACAGPLVDVPKQGERVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP---RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 724 +Y +LWK CAGPL D+PK GE VYYFPQG++E ++AST +ELN+ P+ LPSK+ CRV+ IHL E +DE+YA+ITL+P+ TT P S RP V+SF+KVLTASDTS +GGFSV +KHA ECLPPLDM+Q P QE++A DLH +WRF+H +R Sbjct: 24 MYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVQASTREELNELQPICDLPSKLQCRVIAIHLKVENNSDEIYAEITLMPD------TTQVVIPTQSENRFRPLVNSFTKVLTASDTSAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYR 183 HSP 2 Score: 23.0978 bits (48), Expect = 5.743e-50 Identity = 11/28 (39.29%), Postives = 15/28 (53.57%), Query Frame = 3 Query: 792 NEQVNPKRHLLTPGWKYVLVLPKRLFAG 875 N + P+RH LT GW + K+L G Sbjct: 181 NYRGTPQRHSLTTGWN-EFITSKKLVKG 207
BLAST of DY305549 vs. ExPASy Swiss-Prot
Match: ARFV_ARATH (Auxin response factor 22 OS=Arabidopsis thaliana GN=ARF22 PE=2 SV=2) HSP 1 Score: 192.586 bits (488), Expect = 9.758e-50 Identity = 96/169 (56.80%), Postives = 122/169 (72.19%), Query Frame = 2 Query: 236 LYRELWKACAGPLVDVPKQGERVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPE------PSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 724 +Y +LWK CAGPL D+PK GE++YYFPQG++E +EAST +ELN+ P+ LPSK+ CRV+ I L E +DE YA+ITL+P+ P+QNE + RP V+SF+KVLTASDTS GGF V +KHA ECLPPLDM+Q PTQEL+A DLHG +WRF H +R Sbjct: 24 MYEQLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEASTREELNELKPICDLPSKLQCRVIAIQLKVENNSDETYAEITLMPDTTQVVIPTQNE---------NQFRPLVNSFTKVLTASDTS--GGFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYR 181 HSP 2 Score: 26.9498 bits (58), Expect = 9.758e-50 Identity = 13/28 (46.43%), Postives = 16/28 (57.14%), Query Frame = 3 Query: 792 NEQVNPKRHLLTPGWKYVLVLPKRLFAG 875 N + P+RHLLT GW K+L AG Sbjct: 179 NYRGTPQRHLLTTGWN-AFTTSKKLVAG 205
BLAST of DY305549 vs. ExPASy Swiss-Prot
Match: ARFW_ARATH (Putative auxin response factor 23 OS=Arabidopsis thaliana GN=ARF23 PE=5 SV=2) HSP 1 Score: 197.208 bits (500), Expect = 1.778e-49 Identity = 96/163 (58.90%), Postives = 119/163 (73.01%), Query Frame = 2 Query: 236 LYRELWKACAGPLVDVPKQGERVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 724 +Y +LWK CAGPL D+PK GE+VYYFPQGH+E +EAST +ELN+ P LPSK+ CRV+ IHL E +DE Y +ITL+P+ +Q T + + RP V+SF+KVLTASDTS G FSV KHA ECLPPLDM+Q P QEL+A DLHG +WRFKH +R Sbjct: 24 MYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPNCDLPSKLQCRVIAIHLKVENNSDETYVEITLMPDTTQVVIPTEN---ENQFRPIVNSFTKVLTASDTSAQGEFSVPCKHAIECLPPLDMSQPIPAQELIAIDLHGNQWRFKHSYR 183
BLAST of DY305549 vs. ExPASy Swiss-Prot
Match: ARFO_ARATH (Putative auxin response factor 15 OS=Arabidopsis thaliana GN=ARF15 PE=3 SV=2) HSP 1 Score: 193.741 bits (491), Expect = 3.671e-49 Identity = 95/169 (56.21%), Postives = 122/169 (72.19%), Query Frame = 2 Query: 236 LYRELWKACAGPLVDVPKQGERVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPE------PSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 724 +Y +LWK CAGPL D+PK GE+VYYFPQG++E +EAST +ELN+ P+ LPSK+ CRV+ IHL E +DE YA+ITL+P+ P+QNE + RP V+SF+KVLTASD S +G FSV +KHA ECLPPLDM+Q P QEL+A DLHG +W F+H +R Sbjct: 24 MYEQLWKLCAGPLCDIPKLGEKVYYFPQGNIELVEASTREELNELQPICDLPSKLQCRVIAIHLKVENNSDETYAKITLMPDTTQVVIPTQNE---------NQFRPLVNSFTKVLTASDISANGVFSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYR 183 HSP 2 Score: 23.8682 bits (50), Expect = 3.671e-49 Identity = 8/10 (80.00%), Postives = 9/10 (90.00%), Query Frame = 3 Query: 807 PKRHLLTPGW 836 P+RHLLT GW Sbjct: 186 PQRHLLTTGW 195
BLAST of DY305549 vs. ExPASy Swiss-Prot
Match: ARFQ_ORYSJ (Auxin response factor 17 OS=Oryza sativa subsp. japonica GN=ARF17 PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 1.145e-47 Identity = 90/166 (54.22%), Postives = 115/166 (69.28%), Query Frame = 2 Query: 236 LYRELWKACAGPLVDVPKQGERVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN--EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 724 L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ +IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P Q +P P + + +P + F K LTASDTSTHGGFSV R+ A + PPLD Q P QEL+AKDLHG EW+F+HIFR Sbjct: 27 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQLICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDPYLPAELGSANKQP-TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIAKDLHGNEWKFRHIFR 191 HSP 2 Score: 35.039 bits (79), Expect = 1.145e-47 Identity = 22/44 (50.00%), Postives = 26/44 (59.09%), Query Frame = 3 Query: 807 PKRHLLTPGWKYVLVLPKRLFAGGN--FCGLENNK*PRGEKRGN 932 PKRHLLT GW V V KRL AG + F +NN+ G +R N Sbjct: 194 PKRHLLTTGWS-VFVSAKRLVAGDSVLFIWNDNNQLLLGIRRAN 236
BLAST of DY305549 vs. ExPASy Swiss-Prot
Match: ARFQ_ORYSI (Auxin response factor 17 OS=Oryza sativa subsp. indica GN=ARF17 PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 1.145e-47 Identity = 90/166 (54.22%), Postives = 115/166 (69.28%), Query Frame = 2 Query: 236 LYRELWKACAGPLVDVPKQGERVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN--EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 724 L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ +IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P Q +P P + + +P + F K LTASDTSTHGGFSV R+ A + PPLD Q P QEL+AKDLHG EW+F+HIFR Sbjct: 27 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQLICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDPYLPAELGSANKQP-TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIAKDLHGNEWKFRHIFR 191 HSP 2 Score: 35.039 bits (79), Expect = 1.145e-47 Identity = 22/44 (50.00%), Postives = 26/44 (59.09%), Query Frame = 3 Query: 807 PKRHLLTPGWKYVLVLPKRLFAGGN--FCGLENNK*PRGEKRGN 932 PKRHLLT GW V V KRL AG + F +NN+ G +R N Sbjct: 194 PKRHLLTTGWS-VFVSAKRLVAGDSVLFIWNDNNQLLLGIRRAN 236 The following BLAST results are available for this feature:
BLAST of DY305549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305549 ID=DY305549; Name=DY305549; organism=Citrus sinensis; type=EST; length=1296bpback to top |