DY305549
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305549 vs. ExPASy Swiss-Prot
Match: ARFG_ARATH (Auxin response factor 7 OS=Arabidopsis thaliana GN=ARF7 PE=1 SV=2) HSP 1 Score: 147.517 bits (371), Expect = 8.131e-39 Identity = 85/184 (46.20%), Postives = 105/184 (57.07%), Query Frame = 2 Query: 209 KIPSSNS----------DDLYRELWKACAGPLVDVPKQGERVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 724 K PSSN ++ ELW ACAGPL+ +P G V YFPQGH EQ+ AS Q+ IP + LPSK++C + N+ L A+ ETDEVYAQ+TL P + R F K LTASDTSTHGGFSV R+ A + P LD + P QELVAKD+H W F+HI+R Sbjct: 2 KAPSSNGVSPNPVEGERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASM-QKQTDFIPSYPNLPSKLICMLHNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMGLKLNRQPNEFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYR 184 HSP 2 Score: 35.4242 bits (80), Expect = 8.131e-39 Identity = 18/33 (54.55%), Postives = 21/33 (63.64%), Query Frame = 3 Query: 807 PKRHLLTPGWKYVLVLPKRLFAGGNFCGLENNK 905 PKRHLLT GW V V KRLFAG + + + K Sbjct: 187 PKRHLLTTGWS-VFVSTKRLFAGDSVLFIRDGK 218
BLAST of DY305549 vs. ExPASy Swiss-Prot
Match: ARFO_ORYSJ (Auxin response factor 15 OS=Oryza sativa subsp. japonica GN=ARF15 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 6.782e-38 Identity = 80/166 (48.19%), Postives = 102/166 (61.45%), Query Frame = 2 Query: 245 ELWKACAGPLVDVPKQGERVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV------HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 724 ELW ACAGP+ +P++G V Y PQGH+E L + +P + CRVV++ L+A+ TDEVYAQ++L+PE + D D K H F K LTASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLH EWRF+HI+R Sbjct: 38 ELWHACAGPVAPLPRKGGVVVYLPQGHLEHLGDAPAAAAAAAA----VPPHVFCRVVDVTLLADAATDEVYAQLSLVPEKEEVARRADDGEGEDGDGMKQRFARMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHSTEWRFRHIYR 199 HSP 2 Score: 26.1794 bits (56), Expect = 6.782e-38 Identity = 12/23 (52.17%), Postives = 15/23 (65.22%), Query Frame = 3 Query: 807 PKRHLLTPGWKYVLVLPKRLFAG 875 P+RHLLT GW V K+L +G Sbjct: 202 PRRHLLTTGWS-AFVNKKKLVSG 223
BLAST of DY305549 vs. ExPASy Swiss-Prot
Match: ARFB_ORYSJ (Auxin response factor 2 OS=Oryza sativa subsp. japonica GN=ARF2 PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 5.625e-37 Identity = 80/171 (46.78%), Postives = 103/171 (60.23%), Query Frame = 2 Query: 245 ELWKACAGPLVDVPKQGERVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPD-----PCPADS------PRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 724 ELW ACAGP+ +P++G V Y PQGH+E L A+ P +P + CRVV++ L A+ TDEVYAQ++L+ + + E + C + P H F K LTASDTSTHGGFSV R+ A +C PPLD + P QELVAKDLHG EWRF+HI+R Sbjct: 39 ELWHACAGPVAPLPRKGSAVVYLPQGHLEHLGAAPGSG-----PGAAVPPHVFCRVVDVSLHADAATDEVYAQVSLVADNEEVERRMREGEDGAACDGEGEDAVKRPARIPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSLQRPFQELVAKDLHGTEWRFRHIYR 204 HSP 2 Score: 24.6386 bits (52), Expect = 5.625e-37 Identity = 11/23 (47.83%), Postives = 15/23 (65.22%), Query Frame = 3 Query: 807 PKRHLLTPGWKYVLVLPKRLFAG 875 P+RHLLT GW + K+L +G Sbjct: 207 PRRHLLTTGWS-GFINKKKLVSG 228
BLAST of DY305549 vs. ExPASy Swiss-Prot
Match: ARFC_ORYSJ (Auxin response factor 3 OS=Oryza sativa subsp. japonica GN=ARF3 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 7.910e-36 Identity = 80/171 (46.78%), Postives = 100/171 (58.48%), Query Frame = 2 Query: 242 RELWKACAGPLVDVPKQGERVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT--------PDPCPADSPRPK--VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 724 R+LW ACAGP+V +P++G V Y PQGH+ A + L P + CRVV++ L A+ TDEVYA++ L E E D D R +H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG +WRF+HI+R Sbjct: 81 RDLWHACAGPVVSLPRRGSAVVYLPQGHLSAAGAGGGIRGEVAVAL---PPHVACRVVDVELCADAATDEVYARLALRAEGEVFERNLHGGGIEREDDMEDGDEERKSRMLHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDHKQLRPSQELVAKDLHGAKWRFRHIYR 248 HSP 2 Score: 25.409 bits (54), Expect = 7.910e-36 Identity = 12/23 (52.17%), Postives = 15/23 (65.22%), Query Frame = 3 Query: 807 PKRHLLTPGWKYVLVLPKRLFAG 875 P+RHLLT GW V K+L +G Sbjct: 251 PRRHLLTTGWS-SFVNKKKLVSG 272
BLAST of DY305549 vs. ExPASy Swiss-Prot
Match: ARFN_ORYSJ (Auxin response factor 14 OS=Oryza sativa subsp. japonica GN=ARF14 PE=2 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 1.814e-31 Identity = 72/171 (42.11%), Postives = 95/171 (55.56%), Query Frame = 2 Query: 245 ELWKACAGPLVDVPKQGERVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPS-----------QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 724 ELW ACAGP V +P++G + Y PQ H L A +P + CRVV + L A+ TDEVYA++ L+ E ++ + C A+ H F K LTASDTSTHGGFSV R+ A +C PPLD P+QEL+A DLHG +W+F+HI+R Sbjct: 23 ELWHACAGPGVALPRRGSALVYLPQAH---LAADGGGGEVPPAGAAAVPPHVACRVVGVELRADAATDEVYARLALVAEGEMLQRNFREGGGEDGAGEMEGCDAEKKPRMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKTVRPSQELIAVDLHGTQWKFRHIYR 190 HSP 2 Score: 24.2534 bits (51), Expect = 1.814e-31 Identity = 12/23 (52.17%), Postives = 15/23 (65.22%), Query Frame = 3 Query: 807 PKRHLLTPGWKYVLVLPKRLFAG 875 P+RHLLT GW V K+L +G Sbjct: 193 PRRHLLTIGWS-SFVNRKKLVSG 214
BLAST of DY305549 vs. ExPASy Swiss-Prot
Match: ARFH_ORYSJ (Auxin response factor 8 OS=Oryza sativa subsp. japonica GN=ARF8 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 1.152e-30 Identity = 69/162 (42.59%), Postives = 91/162 (56.17%), Query Frame = 2 Query: 242 RELWKACAGPLVDVPKQGERVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 724 R+LW ACAG + VP G VYYFPQGH E EL+ R+P+ + CRV ++ MA+ +TDEV+A+I L+P +++ D A K SF+K LT SD + GGFSV R A P LD P Q +VAKD+HG W F+HI+R Sbjct: 20 RQLWLACAGGMCTVPPVGAAVYYFPQGHAEHALGLAAPELSAA----RVPALVPCRVASVRYMADPDTDEVFARIRLVPLRAAEDGDVEEDGAAAGEEHEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGVAWNFRHIYR 177 HSP 2 Score: 27.7202 bits (60), Expect = 1.152e-30 Identity = 14/32 (43.75%), Postives = 18/32 (56.25%), Query Frame = 3 Query: 807 PKRHLLTPGWKYVLVLPKRLFAGGNFCGLENN 902 P+RHLLT GW V K+L AG + L + Sbjct: 180 PRRHLLTTGWS-TFVNQKKLVAGDSIVFLRGD 210
BLAST of DY305549 vs. ExPASy Swiss-Prot
Match: ARFJ_ARATH (Auxin response factor 10 OS=Arabidopsis thaliana GN=ARF10 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.499e-30 Identity = 70/169 (41.42%), Postives = 95/169 (56.21%), Query Frame = 2 Query: 245 ELWKACAGPLVDVPKQGERVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPS-----QNEP----TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 724 +LW ACAG +V +P V+YF QGH E A + R+P ILCRVV++ +A+ ETDEV+A+ITLLP P +N+ T P + + K SF+K LT SD + GGFSV R A P LD + P Q ++AKD+HG W+F+HI+R Sbjct: 10 QLWHACAGSMVQIPSLNSTVFYFAQGHTEHAHAPPDFHAP------RVPPLILCRVVSVKFLADAETDEVFAKITLLPLPGNDLDLENDAVLGLTPPSSDGNGNGKEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDIHGETWKFRHIYR 172 HSP 2 Score: 28.1054 bits (61), Expect = 1.499e-30 Identity = 14/31 (45.16%), Postives = 18/31 (58.06%), Query Frame = 3 Query: 807 PKRHLLTPGWKYVLVLPKRLFAGGNFCGLEN 899 P+RHLLT GW V K+L AG + L + Sbjct: 175 PRRHLLTTGWS-TFVNQKKLIAGDSIVFLRS 204
BLAST of DY305549 vs. ExPASy Swiss-Prot
Match: ARFJ_ORYSJ (Auxin response factor 10 OS=Oryza sativa subsp. japonica GN=ARF10 PE=2 SV=3) HSP 1 Score: 128.257 bits (321), Expect = 3.309e-30 Identity = 70/167 (41.92%), Postives = 94/167 (56.29%), Query Frame = 2 Query: 245 ELWKACAGPLVDVPKQGERVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADS------PRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 724 +LW ACAG + VP G VYYFPQGH EQ A+ + + R+P + CRVV + MA+ E+DEV+A+I L+P P + A++ RP+ SF+K LT SD + GGFSV R A P LD + P Q + AKD+HG EW F+HI+R Sbjct: 22 QLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAVD------LSSARVPPLVPCRVVAVRFMADAESDEVFAKIRLVPLRPGDAVVDVGEAAAAEARREEENSRPRPTSFAKTLTQSDANNGGGFSVPRFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFRHIYR 182 HSP 2 Score: 25.7942 bits (55), Expect = 3.309e-30 Identity = 13/23 (56.52%), Postives = 15/23 (65.22%), Query Frame = 3 Query: 807 PKRHLLTPGWKYVLVLPKRLFAG 875 P+RHLLT GW V K+L AG Sbjct: 185 PRRHLLTTGWS-PFVNKKQLTAG 206
BLAST of DY305549 vs. ExPASy Swiss-Prot
Match: ARFJ_ORYSI (Auxin responsive factor 10 OS=Oryza sativa subsp. indica GN=ARF10 PE=2 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 3.309e-30 Identity = 70/167 (41.92%), Postives = 94/167 (56.29%), Query Frame = 2 Query: 245 ELWKACAGPLVDVPKQGERVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADS------PRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 724 +LW ACAG + VP G VYYFPQGH EQ A+ + + R+P + CRVV + MA+ E+DEV+A+I L+P P + A++ RP+ SF+K LT SD + GGFSV R A P LD + P Q + AKD+HG EW F+HI+R Sbjct: 22 QLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAVD------LSSARVPPLVPCRVVAVRFMADAESDEVFAKIRLVPLRPGDAVVDVGEAAAAEARREEENSRPRPTSFAKTLTQSDANNGGGFSVPRFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFRHIYR 182 HSP 2 Score: 25.7942 bits (55), Expect = 3.309e-30 Identity = 13/23 (56.52%), Postives = 15/23 (65.22%), Query Frame = 3 Query: 807 PKRHLLTPGWKYVLVLPKRLFAG 875 P+RHLLT GW V K+L AG Sbjct: 185 PRRHLLTTGWS-PFVNKKQLTAG 206
BLAST of DY305549 vs. ExPASy Swiss-Prot
Match: ARFR_ORYSJ (Auxin response factor 18 OS=Oryza sativa subsp. japonica GN=ARF18 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 3.309e-30 Identity = 67/167 (40.12%), Postives = 93/167 (55.69%), Query Frame = 2 Query: 245 ELWKACAGPLVDVPKQGERVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDP-------CPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 724 +LW ACAG +V +P +VYYFPQGH E + E P R+P+ +LCRV + MA+ +TDEV+A+I L+P + + D A + K SF+K LT SD + GGFSV R A P LD + P Q ++AKD+HG W+F+HI+R Sbjct: 23 QLWHACAGGMVQMPPVSSKVYYFPQGHAEHAQGHGPVEF----PGGRVPALVLCRVAGVRFMADPDTDEVFAKIRLVPVRANEQGYAGDADDGIGAAAAAAAQEEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYR 185 HSP 2 Score: 28.1054 bits (61), Expect = 3.309e-30 Identity = 19/47 (40.43%), Postives = 23/47 (48.94%), Query Frame = 3 Query: 807 PKRHLLTPGWKYVLVLPKRLFAGGN--FCGLENNK*PRGEKRGNTWG 941 P+RHLLT GW V K+L AG + F EN G +R G Sbjct: 188 PRRHLLTTGWS-TFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGG 233 The following BLAST results are available for this feature:
BLAST of DY305549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305549 ID=DY305549; Name=DY305549; organism=Citrus sinensis; type=EST; length=1296bpback to top |