EY702563

Overview
NameEY702563
Unique NameEY702563
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702563 vs. ExPASy Swiss-Prot
Match: P2C32_ARATH (Protein phosphatase 2C 32 OS=Arabidopsis thaliana GN=POL PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.390e-22
Identity = 60/170 (35.29%), Postives = 96/170 (56.47%), Query Frame = 3
Query:  159 AIQLSSEHNGGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVD----IVQNHPHSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVI 656
            A+QLSS+H+  +E     + S HP+D Q ++      RVKG ++V+R+ G  +LKK  +N E L   F++      P ++ EP    H L   D+F++ +SDGL+E+ SN++ V      ++N P    A+ L+   L  AA K  M + DL  I +G RR +HDD++V+
Sbjct:  667 AVQLSSDHSTSVEEEIWRIRSEHPEDDQSILKD----RVKGQLKVTRAFGAGFLKKPNFN-EALLEMFQVEYIGTDPYITCEPCTVHHRLTSSDRFMVLSSDGLYEYYSNEEVVAHVTWFIENVPEGDPAQYLIAELLSRAATKNGMEFHDLLDIPQGDRRKYHDDVSVM 831          
BLAST of EY702563 vs. ExPASy Swiss-Prot
Match: P2C46_ORYSJ (Putative protein phosphatase 2C 46 OS=Oryza sativa subsp. japonica GN=Os05g0111800 PE=3 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 4.507e-21
Identity = 73/247 (29.55%), Postives = 120/247 (48.58%), Query Frame = 3
Query:   30 PLIAAVGSCCLVGVISCGTLYIANLGDSRAVLGR----------LVKGT------------------------GEVLAIQLSSEHNGGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQ----NHPHSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVI 656
            P +A +GSC LV ++    +Y  N+GDSRAVL            L +G+                        GE+ A+QL+ +H+  +    + + S H DD   +       RVKG ++V+R+ G  YLK+  +N+  L   F++      P +S  P I  H L   D+FLI +SDGL+++ + ++ V  V+     +P    A+ L    L  AA +  M + +L +I +G RR +HDD+++I
Sbjct:  339 PELAMMGSCVLVVLMKGADVYAMNVGDSRAVLAHQAEPDLSHVVLPRGSHHDGDGDLAGVKEAIKRQFDECEMGELAALQLTMDHSTNVYKEVRRIRSEHLDDPGCITNG----RVKGCLKVTRAFGAGYLKEPRWNKA-LLEVFQVDYVGSSPYISCRPYIRHHRLGAQDKFLILSSDGLYDYFTKEEVVAQVEAFTAGYPDEDPAKYLSHQILLRAANQAGMGFHELLEIQQGDRRQYHDDVSII 580          
BLAST of EY702563 vs. ExPASy Swiss-Prot
Match: P2C02_ARATH (Probable protein phosphatase 2C 2 OS=Arabidopsis thaliana GN=At1g07160 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.734e-18
Identity = 72/203 (35.47%), Postives = 98/203 (48.28%), Query Frame = 3
Query:   48 GSCCLVGVISCGTLYIANLGDSRAVLGRLVKGTGEVLAIQLSSEHNGGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQNHPHSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVI 656
            GSCC+  +IS G L +AN GD RAVL   V G  E L    +S+H    +  R  + S        V   ++VWR++G + VSR IGD +LK+                      + SEP I+   + P  +FLI ASDGLW+ +SNQ+AVDI         AR   K   Q    KR+   +  K +D  V R   DDI+V+
Sbjct:  214 GSCCVTALISDGNLVVANAGDCRAVLS--VGGFAEAL----TSDHRPSRDDERNRIES----SGGYVDTFNSVWRIQGSLAVSRGIGDAHLKQW---------------------IISEPEINILRINPQHEFLILASDGLWDKVSNQEAVDI---------ARPFCKGTDQ----KRKPLLACKKLVDLSVSRGSLDDISVM 372          
BLAST of EY702563 vs. ExPASy Swiss-Prot
Match: PDP1_RAT ([Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Rattus norvegicus GN=Pdp1 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.342e-16
Identity = 57/170 (33.53%), Postives = 87/170 (51.18%), Query Frame = 3
Query:   36 IAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKGTGEVLAIQLSSEHNGGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKA------------EYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIV 509
            +A  G+   V  +    L++AN GDSRA+LG + +  G   A+ LS++HN   E   Q +   HP +    V+K +  R+ GL+   R+ GDV  K +            +   +  Y KF        P L++EP ++ H L+P D+FL+ A+DGLWE +  QD V IV
Sbjct:  267 VAFSGATACVAHVDGVDLHVANTGDSRAMLG-VQEEDGSWSAVTLSNDHNAQNERELQRLKLEHPKNEAKSVVKQD--RLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIV 433          
BLAST of EY702563 vs. ExPASy Swiss-Prot
Match: PDP1_BOVIN ([Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Bos taurus GN=PDP1 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.342e-16
Identity = 56/170 (32.94%), Postives = 88/170 (51.76%), Query Frame = 3
Query:   36 IAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKGTGEVLAIQLSSEHNGGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKA------------EYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIV 509
            +A  G+   V  +    L++AN GDSRA+LG + +  G   A+ LS++HN   E   + +   HP +    V+K +  R+ GL+   R+ GDV  K +            +   +  Y KF     +  P L++EP ++ H L+P D+FL+ A+DGLWE +  QD V IV
Sbjct:  267 VAFSGATACVAHVDGVDLHVANTGDSRAMLG-VQEEDGSWSAVTLSNDHNAQNEREVERLKLEHPKNEAKSVVKQD--RLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYYTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIV 433          
BLAST of EY702563 vs. ExPASy Swiss-Prot
Match: PDP1_MOUSE ([Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Mus musculus GN=Pdp1 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.446e-16
Identity = 56/170 (32.94%), Postives = 87/170 (51.18%), Query Frame = 3
Query:   36 IAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKGTGEVLAIQLSSEHNGGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKA------------EYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIV 509
            +A  G+   V  +    L++AN GDSRA+LG + +  G   A+ LS++HN   E   + +   HP +    V+K +  R+ GL+   R+ GDV  K +            +   +  Y KF        P L++EP ++ H L+P D+FL+ A+DGLWE +  QD V IV
Sbjct:  267 VAFSGATACVAHVDGVDLHVANTGDSRAMLG-VQEEDGSWSAVTLSNDHNAQNERELERLKLEHPKNEAKSVVKQD--RLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIV 433          
BLAST of EY702563 vs. ExPASy Swiss-Prot
Match: PDP1_HUMAN ([Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Homo sapiens GN=PDP1 PE=1 SV=3)

HSP 1 Score: 84.3445 bits (207), Expect = 9.725e-16
Identity = 56/170 (32.94%), Postives = 86/170 (50.59%), Query Frame = 3
Query:   36 IAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKGTGEVLAIQLSSEHNGGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKA------------EYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIV 509
            +A  G+   V  +    L++AN GDSRA+LG + +  G   A+ LS++HN   E   + +   HP      V+K +  R+ GL+   R+ GDV  K +            +   +  Y KF        P L++EP ++ H L+P D+FL+ A+DGLWE +  QD V IV
Sbjct:  267 VAFSGATACVAHVDGVDLHVANTGDSRAMLG-VQEEDGSWSAVTLSNDHNAQNERELERLKLEHPKSEAKSVVKQD--RLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIV 433          
BLAST of EY702563 vs. ExPASy Swiss-Prot
Match: PDP1_PONAB ([Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Pongo abelii GN=PDP1 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.270e-15
Identity = 56/170 (32.94%), Postives = 86/170 (50.59%), Query Frame = 3
Query:   36 IAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKGTGEVLAIQLSSEHNGGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKA------------EYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIV 509
            +A  G+   V  +    L++AN GDSRA+LG + +  G   A+ LS++HN   E   + +   HP      V+K +  R+ GL+   R+ GDV  K +            +   +  Y KF        P L++EP ++ H L+P D+FL+ A+DGLWE +  QD V IV
Sbjct:  267 VAFSGATACVAHVDGVDLHVANTGDSRAMLG-VQEEDGSWSALTLSNDHNAQNERELERLKLEHPKSEAKSVVKQD--RLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIV 433          
BLAST of EY702563 vs. ExPASy Swiss-Prot
Match: PDP2_HUMAN ([Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 2, mitochondrial OS=Homo sapiens GN=PDP2 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.659e-15
Identity = 50/155 (32.26%), Postives = 84/155 (54.19%), Query Frame = 3
Query:   87 LYIANLGDSRAVLGRLVKGTGEVLAIQLSSEHNGGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAE----------YNREPLYA-KFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQNH 518
            L++AN GD RA+LG + +  G    + L+ +HN   ++    +   HP+     ++  +  R+ G++   R+ GDV LK ++          +N E L   +F     +  P L++EP ++ H L+P D+FL+ ASDGLW+ LSN+D V +V  H
Sbjct:  279 LHVANAGDCRAILG-VQEDNGMWSCLPLTRDHNAWNQAELSRLKREHPESEDRTIIMED--RLLGVLIPCRAFGDVQLKWSKELQRSILERGFNTEALNIYQFTPPHYYTPPYLTAEPEVTYHRLRPQDKFLVLASDGLWDMLSNEDVVRLVVGH 430          
BLAST of EY702563 vs. ExPASy Swiss-Prot
Match: P2C30_ARATH (Probable protein phosphatase 2C 30 OS=Arabidopsis thaliana GN=PP2C5 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.166e-15
Identity = 53/155 (34.19%), Postives = 82/155 (52.90%), Query Frame = 3
Query:   48 GSCCLVGVISCGTLYIANLGDSRAVLGRLVKGTGEVLAIQLSSEHNGGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQ 512
            G+CC+  +IS G L ++N GD RAV+ R   GT E L    +S+HN    +  + + ++       V   + VWR++G + VSR IGD YLK+                      + +EP      ++P  +FLI ASDGLW+ ++NQ+AVD+V+
Sbjct:  224 GACCVTALISKGELAVSNAGDCRAVMSR--GGTAEAL----TSDHNPSQANELKRIEAL----GGYVDCCNGVWRIQGTLAVSRGIGDRYLKEW---------------------VIAEPETRTLRIKPEFEFLILASDGLWDKVTNQEAVDVVR 347          
The following BLAST results are available for this feature:
BLAST of EY702563 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
P2C32_ARATH2.390e-2235.29Protein phosphatase 2C 32 OS=Arabidopsis thaliana ... [more]
P2C46_ORYSJ4.507e-2129.55Putative protein phosphatase 2C 46 OS=Oryza sativa... [more]
P2C02_ARATH2.734e-1835.47Probable protein phosphatase 2C 2 OS=Arabidopsis t... [more]
PDP1_RAT3.342e-1633.53[Pyruvate dehydrogenase [acetyl-transferring]]-pho... [more]
PDP1_BOVIN3.342e-1632.94[Pyruvate dehydrogenase [acetyl-transferring]]-pho... [more]
PDP1_MOUSE7.446e-1632.94[Pyruvate dehydrogenase [acetyl-transferring]]-pho... [more]
PDP1_HUMAN9.725e-1632.94[Pyruvate dehydrogenase [acetyl-transferring]]-pho... [more]
PDP1_PONAB1.270e-1532.94[Pyruvate dehydrogenase [acetyl-transferring]]-pho... [more]
PDP2_HUMAN1.659e-1532.26[Pyruvate dehydrogenase [acetyl-transferring]]-pho... [more]
P2C30_ARATH2.166e-1534.19Probable protein phosphatase 2C 30 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-009-E04-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702563 ID=EY702563; Name=EY702563; organism=Citrus sinensis; type=EST; length=883bp
TCCTTGGAACTAAACAATGGCCTATGAAGCCTCTGATAGCCGCTGTTGGA
TCTTGCTGTCTGGTTGGTGTTATCAGTTGCGGAACCCTCTACATCGCTAA
CCTTGGCGATTCTCGTGCTGTGCTTGGGAGGCTTGTCAAGGGAACCGGAG
AAGTGCTTGCCATCCAGCTTTCATCGGAGCATAATGGAGGCATCGAATCT
GTTAGACAAGAGATGCACTCTATGCATCCTGATGACTCACAGATTGTAGT
TCTAAAGCACAATGTCTGGCGTGTGAAAGGCTTGATACAGGTTTCTAGAT
CTATTGGCGATGTGTATCTGAAAAAAGCTGAGTATAACAGGGAGCCTTTG
TATGCGAAATTTCGCCTTCGTGAACCTTTTAGAAAGCCAATTCTGAGTTC
TGAACCATCAATTTCAGCGCATGAACTTCAACCTTTTGATCAGTTTCTTA
TATTTGCTTCTGATGGACTGTGGGAGCATCTTAGCAATCAAGATGCGGTT
GATATAGTCCAAAATCACCCACACAGTGGAAGTGCTAGGAGGCTTGTGAA
AGCTGCATTGCAGGAAGCTGCGAAAAAGAGAGAAATGAGATACTCGGATT
TGAAGAAGATTGATCGGGGCGTTCGCCGGCACTTCCACGATGACATTACG
GTCATTGGTGGATTTCTTGATTCACATCTTGTGAGCAGAGCCAGCTCAGT
CAGAGGGCCGTCTTTGTCTGTGAGAGGGGGGGGTGGTAACATGCCTTCAA
AACTTTAGCTCCATGCGCCACGCCCGTTGAACTTAACACCCACTTAAAGG
GGGCTGGTTCTTCATGCAATTGTAGGTGGTGCTCGAAACTTTTTGAACCT
TCTACAAATATCCACTGGTATATGGGAGTGGAT
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