EY702562
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702562 vs. ExPASy Swiss-Prot
Match: SSG1_ORYSA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa GN=WAXY PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.180e-15 Identity = 43/112 (38.39%), Postives = 63/112 (56.25%), Query Frame = 2 Query: 419 LQVKTMASKLATSRQAGRNGFRSQNGPSLMIVC-GVGLNILFGGTEVAPWSKLGDLVMFLEVCHQHWPPMGHRVMTIAPGYDQYQDAWDTDGVLDLKL-ETN*KSRLLPCHK 748 L V T A +++ + G S+ PS+++ G G+N++F G E+APWSK G L L GHRVM I+P YDQY+DAWDT V ++K+ + + R C+K Sbjct: 48 LSVTTSARATPKQQRSVQRG--SRRFPSVVVYATGAGMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYK 157 HSP 2 Score: 31.9574 bits (71), Expect = 1.180e-15 Identity = 16/32 (50.00%), Postives = 18/32 (56.25%), Query Frame = 1 Query: 745 QRGVDRVLGDHLGFLARGGGKPHSKSMGPGLG 840 +RGVDRV DH FL + GK K GP G Sbjct: 157 KRGVDRVFIDHPSFLEKVWGKTGEKIYGPDTG 188
BLAST of EY702562 vs. ExPASy Swiss-Prot
Match: SSG1B_HORVU (Granule-bound starch synthase 1b, chloroplastic/amyloplastic (Fragment) OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.182e-15 Identity = 39/90 (43.33%), Postives = 53/90 (58.89%), Query Frame = 2 Query: 434 MASKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFGGTEVAPWSKLGDLVMFLEVCHQHWPPMGHRVMTIAPGYDQYQDAWDTDGVLDL 703 +A + AT+ + RN R+ S IVC G+ I+F TEV PW K G L + MGHRVMTIAP YDQY+D WDT+ ++++ Sbjct: 11 LAKRRATNYETHRNSSRT----SSPIVCSTGMPIIFVATEVHPWCKTGGLGDVVGGLPPALAAMGHRVMTIAPRYDQYKDTWDTNVLVEV 96 HSP 2 Score: 32.3426 bits (72), Expect = 1.182e-15 Identity = 17/32 (53.12%), Postives = 19/32 (59.38%), Query Frame = 1 Query: 745 QRGVDRVLGDHLGFLARGGGKPHSKSMGPGLG 840 +RGVDRV DH FL + GK SK GP G Sbjct: 112 KRGVDRVFVDHPMFLEKVWGKTGSKLYGPTTG 143
BLAST of EY702562 vs. ExPASy Swiss-Prot
Match: SSG1_HORVU (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Hordeum vulgare GN=WAXY PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.590e-15 Identity = 48/132 (36.36%), Postives = 71/132 (53.79%), Query Frame = 2 Query: 365 KFRCMKHSGLRSLNIIDD-LQVKTMASKLAT--SRQAGRNGFRSQNGPSLMIVCGVGLNILFGGTEVAPWSKLGDLVMFLEVCHQHWPPMGHRVMTIAPGYDQYQDAWDTDGVLDLKL-ETN*KSRLLPCHK 748 +FR GLR N D L ++T+ + A SR+A R R + ++ G G+N++F G E+APWSK G L L GHRVM ++P YDQY+DAWDT + ++K+ + + R C+K Sbjct: 21 RFRRPGFQGLRPRNPADAALGMRTIGASAAPKQSRKAHRGSRRCLS--VVVSATGSGMNLVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVVSPRYDQYKDAWDTSVISEIKVADEYERVRFFHCYK 150 HSP 2 Score: 31.5722 bits (70), Expect = 2.590e-15 Identity = 16/32 (50.00%), Postives = 18/32 (56.25%), Query Frame = 1 Query: 745 QRGVDRVLGDHLGFLARGGGKPHSKSMGPGLG 840 +RGVDRV DH FL + GK K GP G Sbjct: 150 KRGVDRVFIDHPWFLEKVRGKTKEKIYGPDAG 181
BLAST of EY702562 vs. ExPASy Swiss-Prot
Match: SSG1_PEA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Pisum sativum PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 1.619e-14 Identity = 46/121 (38.02%), Postives = 67/121 (55.37%), Query Frame = 2 Query: 389 GLRSLNIIDDLQVKTMASKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFGGTEVAPWSKLGDLVMFLEVCHQHWPPMGHRVMTIAPGYDQYQDAWDTDGVLDLKLETN*KS-RLLPCHK 748 GLRSLN L V+T + +S + ++ + IVCG+ L +F G EV PWSK G L L GHRVMT++P YDQY+DAWDT+ ++++K+ ++ R C+K Sbjct: 44 GLRSLN---KLHVRTARATSGSSDTSEKSLGK--------IVCGMSL--VFVGAEVGPWSKTGGLGDVLGGLPPVLAGNGHRVMTVSPRYDQYKDAWDTNVLVEVKVGDKIETVRFFHCYK 151 HSP 2 Score: 33.113 bits (74), Expect = 1.619e-14 Identity = 18/32 (56.25%), Postives = 19/32 (59.38%), Query Frame = 1 Query: 745 QRGVDRVLGDHLGFLARGGGKPHSKSMGPGLG 840 +RGVDRV DH FL R GK SK GP G Sbjct: 151 KRGVDRVFVDHPLFLERVWGKTGSKLYGPKTG 182
BLAST of EY702562 vs. ExPASy Swiss-Prot
Match: SSG1_WHEAT (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Triticum aestivum GN=WAXY PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 5.989e-14 Identity = 45/131 (34.35%), Postives = 68/131 (51.91%), Query Frame = 2 Query: 365 KFRCMKHSGLRSLNIIDD-LQVKTMASKLATSRQAGRNGFRSQNGPSLMIVCGVG-LNILFGGTEVAPWSKLGDLVMFLEVCHQHWPPMGHRVMTIAPGYDQYQDAWDTDGVLDLK-LETN*KSRLLPCHK 748 +FR GLR N D L ++T+ + A + + F + ++ G G +N++F G E+APWSK G L L GHRVM I+P YDQY+DAWDT + ++K ++ + R C+K Sbjct: 21 RFRRPGFQGLRPRNPADAALGMRTVGASAAPKQSRKPHRFDRRCLSMVVRATGSGGMNLVFVGAEMAPWSKTGGLGDVLGGLPAAMAANGHRVMVISPRYDQYKDAWDTSVISEIKVVDRYERVRYFHCYK 151 HSP 2 Score: 31.5722 bits (70), Expect = 5.989e-14 Identity = 16/32 (50.00%), Postives = 18/32 (56.25%), Query Frame = 1 Query: 745 QRGVDRVLGDHLGFLARGGGKPHSKSMGPGLG 840 +RGVDRV DH FL + GK K GP G Sbjct: 151 KRGVDRVFVDHPCFLEKVRGKTKEKIYGPDAG 182 The following BLAST results are available for this feature:
BLAST of EY702562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >EY702562 ID=EY702562; Name=EY702562; organism=Citrus sinensis; type=EST; length=908bpback to top |