DY305513
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305513 vs. ExPASy Swiss-Prot
Match: CH10_LEPCP (10 kDa chaperonin OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=groS PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 4.023e-11 Identity = 34/93 (36.56%), Postives = 61/93 (65.59%), Query Frame = 1 Query: 595 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDLQGREGTNYIALRASEVEAVL 873 L+PL+DRV +K E E TA G+++ + + EKP G V+AVGPG +++G+ L++A G+ V++ KY+G ++ +G + +R ++ AV+ Sbjct: 3 LRPLHDRVIVKRLEQETKTASGIVIPDNAAEKPDQGEVLAVGPGKRNDKGDFVALNVAVGDRVLFGKYSGQTVK-VDGDELLVMREEDLFAVV 94 HSP 2 Score: 69.3218 bits (168), Expect = 5.255e-11 Identity = 36/92 (39.13%), Postives = 57/92 (61.96%), Query Frame = 1 Query: 301 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 573 ++PL DRV+VK E KT GI +P A KP GEV+AVG GK K + ++V G +V++ KY+G ++ +G L++RE+D+ ++ Sbjct: 3 LRPLHDRVIVKRLEQETKTASGIVIPDNAAEKPDQGEVLAVGPGKRNDKGDFVALNVAVGDRVLFGKYSGQTVKVDGDELLVMREEDLFAVV 94
BLAST of DY305513 vs. ExPASy Swiss-Prot
Match: CH10_CHLPN (10 kDa chaperonin OS=Chlamydia pneumoniae GN=groS PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 4.023e-11 Identity = 37/93 (39.78%), Postives = 55/93 (59.14%), Query Frame = 1 Query: 301 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 576 IKPLGDR+LVK + E GGI LP TA+ K EV+ +G GK T T L V+ G ++ KYAG E+ + ++IL+ +++ +L+ Sbjct: 10 IKPLGDRILVKREEEEATARGGIILPDTAKKKQDRAEVLVLGTGKRTDDGTLLPFEVQVGDIILMDKYAGQEITIDDEEYVILQSSEIMAVLK 102
BLAST of DY305513 vs. ExPASy Swiss-Prot
Match: CH10_STAS1 (10 kDa chaperonin OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=groS PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 5.255e-11 Identity = 33/93 (35.48%), Postives = 62/93 (66.67%), Query Frame = 1 Query: 595 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDLQGREGTNYIALRASEVEAVL 873 LKPL +RV I+ +E E+TT G++LT+++KEK + G +IAVG G + ++G+R + G+ V++ +YAG +++ R Y+ + ++ A++ Sbjct: 2 LKPLGNRVIIQKSEQEQTTKSGIVLTDSAKEKSNEGTIIAVGAGRILKDGSRVAPEVNEGDKVVFQQYAGTEVK-RGDETYLIVNEEDILAII 93
BLAST of DY305513 vs. ExPASy Swiss-Prot
Match: CH10_PSEST (10 kDa chaperonin OS=Pseudomonas stutzeri GN=groS PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 5.255e-11 Identity = 34/94 (36.17%), Postives = 63/94 (67.02%), Query Frame = 1 Query: 301 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTE-LEFNGANHLILREDDVVGILE 576 ++PL DRV+++ E KT GGI LP +A KP GEVVAVG G+ + ++ ++VK G +V++ Y+G+ ++ +G + L++ E++++ ++E Sbjct: 3 LRPLHDRVVIRRSEEETKTAGGIVLPGSAAEKPNRGEVVAVGTGRVLDNGEVRALAVKVGDKVVFGPYSGSNTVKVDGEDLLVMSENEILAVVE 96
BLAST of DY305513 vs. ExPASy Swiss-Prot
Match: CH10_PSEPW (10 kDa chaperonin OS=Pseudomonas putida (strain W619) GN=groS PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 5.255e-11 Identity = 34/94 (36.17%), Postives = 63/94 (67.02%), Query Frame = 1 Query: 301 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTE-LEFNGANHLILREDDVVGILE 576 ++PL DRV+++ E KT GGI LP +A KP GEVVAVG G+ + ++ ++VK G +V++ Y+G+ ++ +G + L++ E++++ ++E Sbjct: 3 LRPLHDRVVIRRSEEESKTAGGIVLPGSAAEKPNRGEVVAVGTGRILDNGEVRALAVKVGDKVVFGPYSGSNTVKVDGEDLLVMSENEILAVVE 96 HSP 2 Score: 68.9366 bits (167), Expect = 6.863e-11 Identity = 33/93 (35.48%), Postives = 61/93 (65.59%), Query Frame = 1 Query: 595 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDLQGREGTNYIALRASEVEAVL 873 L+PL+DRV I+ +E E TAGG++L ++ EKP+ G V+AVG G + + G + L++ G+ V++ Y+G++ +G + + + +E+ AV+ Sbjct: 3 LRPLHDRVVIRRSEEESKTAGGIVLPGSAAEKPNRGEVVAVGTGRILDNGEVRALAVKVGDKVVFGPYSGSNTVKVDGEDLLVMSENEILAVV 95
BLAST of DY305513 vs. ExPASy Swiss-Prot
Match: CH10_COLMA (10 kDa chaperonin OS=Colwellia maris GN=groS PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 5.255e-11 Identity = 41/95 (43.16%), Postives = 59/95 (62.11%), Query Frame = 1 Query: 298 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELE-FNGANHLILREDDVVGILE 576 SI+PL DRV+VK K E K++GGI L +A K EV+AVG G+ + ++ + VK G QVI+S+ G + E +G LIL E D++ I+E Sbjct: 2 SIRPLHDRVIVKRKDAESKSEGGIVLMGSATEKSTRAEVIAVGNGRILENGEVRPLDVKVGDQVIFSEGYGVKTEKIDGEEVLILSESDILAIVE 96
BLAST of DY305513 vs. ExPASy Swiss-Prot
Match: CH10_STAHJ (10 kDa chaperonin OS=Staphylococcus haemolyticus (strain JCSC1435) GN=groS PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 6.863e-11 Identity = 36/93 (38.71%), Postives = 59/93 (63.44%), Query Frame = 1 Query: 301 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 576 +KPLG+RV+++ K E+ T GI L +A+ K G VVAVG G+ + K+ VK G +V++ +YAG+E++ +LIL +D++ I+E Sbjct: 2 LKPLGNRVIIERKEQEQTTKSGIVLTDSAKEKSNEGIVVAVGTGRVLDNGEKVAPEVKEGDRVVFQEYAGSEVKRGDKTYLILNVEDLLAIIE 94
BLAST of DY305513 vs. ExPASy Swiss-Prot
Match: CH10_PSEU2 (10 kDa chaperonin OS=Pseudomonas syringae pv. syringae (strain B728a) GN=groS PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 6.863e-11 Identity = 33/94 (35.11%), Postives = 63/94 (67.02%), Query Frame = 1 Query: 301 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTE-LEFNGANHLILREDDVVGILE 576 ++PL DRV+++ E KT GGI LP +A KP GE+VAVG G+ + ++ ++VK G +V++ Y+G+ ++ +G + L++ E++++ ++E Sbjct: 3 LRPLHDRVVIRRSEEETKTAGGIVLPGSAAEKPNRGEIVAVGTGRVLDNGEVRALAVKVGDKVVFGPYSGSNTVKVDGEDLLVMSENEILAVVE 96
BLAST of DY305513 vs. ExPASy Swiss-Prot
Match: CH10_PSESM (10 kDa chaperonin OS=Pseudomonas syringae pv. tomato GN=groS PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 6.863e-11 Identity = 33/94 (35.11%), Postives = 63/94 (67.02%), Query Frame = 1 Query: 301 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTE-LEFNGANHLILREDDVVGILE 576 ++PL DRV+++ E KT GGI LP +A KP GE+VAVG G+ + ++ ++VK G +V++ Y+G+ ++ +G + L++ E++++ ++E Sbjct: 3 LRPLHDRVVIRRSEEETKTAGGIVLPGSAAEKPNRGEIVAVGTGRVLDNGEVRALAVKVGDKVVFGPYSGSNTVKVDGEDLLVMSENEILAVVE 96
BLAST of DY305513 vs. ExPASy Swiss-Prot
Match: CH10_PSE14 (10 kDa chaperonin OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=groS PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 6.863e-11 Identity = 33/94 (35.11%), Postives = 63/94 (67.02%), Query Frame = 1 Query: 301 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTE-LEFNGANHLILREDDVVGILE 576 ++PL DRV+++ E KT GGI LP +A KP GE+VAVG G+ + ++ ++VK G +V++ Y+G+ ++ +G + L++ E++++ ++E Sbjct: 3 LRPLHDRVVIRRSEEETKTAGGIVLPGSAAEKPNRGEIVAVGTGRVLDNGEVRALAVKVGDKVVFGPYSGSNTVKVDGEDLLVMSENEILAVVE 96 The following BLAST results are available for this feature:
BLAST of DY305513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 493
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY305513 ID=DY305513; Name=DY305513; organism=Citrus sinensis; type=EST; length=1232bpback to top |