DY305513

Overview
NameDY305513
Unique NameDY305513
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1232
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY305513 vs. ExPASy Swiss-Prot
Match: CH10_CYAP4 (10 kDa chaperonin OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=groS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.992e-18
Identity = 46/94 (48.94%), Postives = 66/94 (70.21%), Query Frame = 1 
Query:  295 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 573
            +++KPLGDRV VK+   EEKT GGI LP TA+ KPQ GE+VAVG GK     ++ +  VK G +V+YSKYAGT+++     +++L E D++ I+
Sbjct:    9 STVKPLGDRVFVKVSASEEKTAGGILLPDTAKEKPQVGEIVAVGPGKRNDDGSRQEPEVKIGDKVLYSKYAGTDIKLGTEEYVLLSEKDILAIV 102

HSP 2 Score: 92.4337 bits (228), Expect = 5.796e-18
Identity = 43/98 (43.88%), Postives = 70/98 (71.43%), Query Frame = 1 
Query:  586 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDLQ-GREGTNYIALRASEVEAVLS 876
            +  +KPL DRVF+KV+ +EE TAGG+LL + +KEKP +G ++AVGPG  +++G+R+   +  G+ V+YSKYAG D++ G E   Y+ L   ++ A+++
Sbjct:    8 VSTVKPLGDRVFVKVSASEEKTAGGILLPDTAKEKPQVGEIVAVGPGKRNDDGSRQEPEVKIGDKVLYSKYAGTDIKLGTE--EYVLLSEKDILAIVA 103
[Close]
BLAST of DY305513 vs. ExPASy Swiss-Prot
Match: CH10_BACP3 (10 kDa chaperonin OS=Bacillus PS3 GN=groS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.992e-18
Identity = 44/92 (47.83%), Postives = 66/92 (71.74%), Query Frame = 1 
Query:  301 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 573
            +KPLGDR+++++   EEKT  GI LP TA+ KPQ G VVAVG G+ +    ++    K G +VI+SKYAGTE++++G  +LILRE D++ ++
Sbjct:    2 LKPLGDRIVIEVVETEEKTASGIVLPDTAKEKPQEGRVVAVGAGRVLDNGQRIGRKSKVGDRVIFSKYAGTEVKYDGKEYLILRESDILAVI 93

HSP 2 Score: 79.7221 bits (195), Expect = 3.888e-14
Identity = 41/93 (44.09%), Postives = 61/93 (65.59%), Query Frame = 1 
Query:  595 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDLQGREGTNYIALRASEVEAVL 873
            LKPL DR+ I+V E EE TA G++L + +KEKP  G V+AVG G + + G R       G+ V++SKYAG +++  +G  Y+ LR S++ AV+
Sbjct:    2 LKPLGDRIVIEVVETEEKTASGIVLPDTAKEKPQEGRVVAVGAGRVLDNGQRIGRKSKVGDRVIFSKYAGTEVK-YDGKEYLILRESDILAVI 93
[Close]
BLAST of DY305513 vs. ExPASy Swiss-Prot
Match: CH10_BACHK (10 kDa chaperonin OS=Bacillus thuringiensis subsp. konkukian GN=groS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.992e-18
Identity = 43/92 (46.74%), Postives = 67/92 (72.83%), Query Frame = 1 
Query:  301 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 573
            +KPLGDRV++++   EEKT  GI LP TA+ KPQ G+V+AVG G+ +    ++ + V  G  +I+SKYAGTE+++ G ++LILRE D++ ++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVI 93

HSP 2 Score: 91.6633 bits (226), Expect = 9.887e-18
Identity = 46/93 (49.46%), Postives = 67/93 (72.04%), Query Frame = 1 
Query:  595 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDLQGREGTNYIALRASEVEAVL 873
            LKPL DRV I++ +AEE TA G++L + +KEKP  G VIAVG G + E G R  L +A G+ +++SKYAG +++  EGT+Y+ LR S++ AV+
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVK-YEGTDYLILRESDILAVI 93
[Close]
BLAST of DY305513 vs. ExPASy Swiss-Prot
Match: CH10_BACCZ (10 kDa chaperonin OS=Bacillus cereus (strain ZK / E33L) GN=groS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.992e-18
Identity = 43/92 (46.74%), Postives = 67/92 (72.83%), Query Frame = 1 
Query:  301 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 573
            +KPLGDRV++++   EEKT  GI LP TA+ KPQ G+V+AVG G+ +    ++ + V  G  +I+SKYAGTE+++ G ++LILRE D++ ++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVI 93

HSP 2 Score: 91.6633 bits (226), Expect = 9.887e-18
Identity = 46/93 (49.46%), Postives = 67/93 (72.04%), Query Frame = 1 
Query:  595 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDLQGREGTNYIALRASEVEAVL 873
            LKPL DRV I++ +AEE TA G++L + +KEKP  G VIAVG G + E G R  L +A G+ +++SKYAG +++  EGT+Y+ LR S++ AV+
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVK-YEGTDYLILRESDILAVI 93
[Close]
BLAST of DY305513 vs. ExPASy Swiss-Prot
Match: CH10_BACCQ (10 kDa chaperonin OS=Bacillus cereus (strain Q1) GN=groS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.992e-18
Identity = 43/92 (46.74%), Postives = 67/92 (72.83%), Query Frame = 1 
Query:  301 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 573
            +KPLGDRV++++   EEKT  GI LP TA+ KPQ G+V+AVG G+ +    ++ + V  G  +I+SKYAGTE+++ G ++LILRE D++ ++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVI 93

HSP 2 Score: 91.6633 bits (226), Expect = 9.887e-18
Identity = 46/93 (49.46%), Postives = 67/93 (72.04%), Query Frame = 1 
Query:  595 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDLQGREGTNYIALRASEVEAVL 873
            LKPL DRV I++ +AEE TA G++L + +KEKP  G VIAVG G + E G R  L +A G+ +++SKYAG +++  EGT+Y+ LR S++ AV+
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVK-YEGTDYLILRESDILAVI 93
[Close]
BLAST of DY305513 vs. ExPASy Swiss-Prot
Match: CH10_BACC7 (10 kDa chaperonin OS=Bacillus cereus (strain AH187) GN=groS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.992e-18
Identity = 43/92 (46.74%), Postives = 67/92 (72.83%), Query Frame = 1 
Query:  301 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 573
            +KPLGDRV++++   EEKT  GI LP TA+ KPQ G+V+AVG G+ +    ++ + V  G  +I+SKYAGTE+++ G ++LILRE D++ ++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVI 93

HSP 2 Score: 91.6633 bits (226), Expect = 9.887e-18
Identity = 46/93 (49.46%), Postives = 67/93 (72.04%), Query Frame = 1 
Query:  595 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDLQGREGTNYIALRASEVEAVL 873
            LKPL DRV I++ +AEE TA G++L + +KEKP  G VIAVG G + E G R  L +A G+ +++SKYAG +++  EGT+Y+ LR S++ AV+
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVK-YEGTDYLILRESDILAVI 93
[Close]
BLAST of DY305513 vs. ExPASy Swiss-Prot
Match: CH10_BACC3 (10 kDa chaperonin OS=Bacillus cereus (strain 03BB102) GN=groS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.992e-18
Identity = 43/92 (46.74%), Postives = 67/92 (72.83%), Query Frame = 1 
Query:  301 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 573
            +KPLGDRV++++   EEKT  GI LP TA+ KPQ G+V+AVG G+ +    ++ + V  G  +I+SKYAGTE+++ G ++LILRE D++ ++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVI 93

HSP 2 Score: 91.6633 bits (226), Expect = 9.887e-18
Identity = 46/93 (49.46%), Postives = 67/93 (72.04%), Query Frame = 1 
Query:  595 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDLQGREGTNYIALRASEVEAVL 873
            LKPL DRV I++ +AEE TA G++L + +KEKP  G VIAVG G + E G R  L +A G+ +++SKYAG +++  EGT+Y+ LR S++ AV+
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVK-YEGTDYLILRESDILAVI 93
[Close]
BLAST of DY305513 vs. ExPASy Swiss-Prot
Match: CH10_BACC1 (10 kDa chaperonin OS=Bacillus cereus (strain ATCC 10987) GN=groS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.992e-18
Identity = 43/92 (46.74%), Postives = 67/92 (72.83%), Query Frame = 1 
Query:  301 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 573
            +KPLGDRV++++   EEKT  GI LP TA+ KPQ G+V+AVG G+ +    ++ + V  G  +I+SKYAGTE+++ G ++LILRE D++ ++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVI 93

HSP 2 Score: 91.6633 bits (226), Expect = 9.887e-18
Identity = 46/93 (49.46%), Postives = 67/93 (72.04%), Query Frame = 1 
Query:  595 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDLQGREGTNYIALRASEVEAVL 873
            LKPL DRV I++ +AEE TA G++L + +KEKP  G VIAVG G + E G R  L +A G+ +++SKYAG +++  EGT+Y+ LR S++ AV+
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVK-YEGTDYLILRESDILAVI 93
[Close]
BLAST of DY305513 vs. ExPASy Swiss-Prot
Match: CH10_BACC0 (10 kDa chaperonin OS=Bacillus cereus (strain AH820) GN=groS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.992e-18
Identity = 43/92 (46.74%), Postives = 67/92 (72.83%), Query Frame = 1 
Query:  301 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 573
            +KPLGDRV++++   EEKT  GI LP TA+ KPQ G+V+AVG G+ +    ++ + V  G  +I+SKYAGTE+++ G ++LILRE D++ ++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVI 93

HSP 2 Score: 91.6633 bits (226), Expect = 9.887e-18
Identity = 46/93 (49.46%), Postives = 67/93 (72.04%), Query Frame = 1 
Query:  595 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDLQGREGTNYIALRASEVEAVL 873
            LKPL DRV I++ +AEE TA G++L + +KEKP  G VIAVG G + E G R  L +A G+ +++SKYAG +++  EGT+Y+ LR S++ AV+
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVK-YEGTDYLILRESDILAVI 93
[Close]
BLAST of DY305513 vs. ExPASy Swiss-Prot
Match: CH10_BACAN (10 kDa chaperonin OS=Bacillus anthracis GN=groS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.992e-18
Identity = 43/92 (46.74%), Postives = 67/92 (72.83%), Query Frame = 1 
Query:  301 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 573
            +KPLGDRV++++   EEKT  GI LP TA+ KPQ G+V+AVG G+ +    ++ + V  G  +I+SKYAGTE+++ G ++LILRE D++ ++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVI 93

HSP 2 Score: 91.6633 bits (226), Expect = 9.887e-18
Identity = 46/93 (49.46%), Postives = 67/93 (72.04%), Query Frame = 1 
Query:  595 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDLQGREGTNYIALRASEVEAVL 873
            LKPL DRV I++ +AEE TA G++L + +KEKP  G VIAVG G + E G R  L +A G+ +++SKYAG +++  EGT+Y+ LR S++ AV+
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVK-YEGTDYLILRESDILAVI 93
The following BLAST results are available for this feature:
BLAST of DY305513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 493
Match NameE-valueIdentityDescription
CH10_CYAP41.992e-1848.9410 kDa chaperonin OS=Cyanothece sp. (strain PCC 74... [more]
CH10_BACP31.992e-1847.8310 kDa chaperonin OS=Bacillus PS3 GN=groS PE=3 SV=... [more]
CH10_BACHK1.992e-1846.7410 kDa chaperonin OS=Bacillus thuringiensis subsp.... [more]
CH10_BACCZ1.992e-1846.7410 kDa chaperonin OS=Bacillus cereus (strain ZK / ... [more]
CH10_BACCQ1.992e-1846.7410 kDa chaperonin OS=Bacillus cereus (strain Q1) G... [more]
CH10_BACC71.992e-1846.7410 kDa chaperonin OS=Bacillus cereus (strain AH187... [more]
CH10_BACC31.992e-1846.7410 kDa chaperonin OS=Bacillus cereus (strain 03BB1... [more]
CH10_BACC11.992e-1846.7410 kDa chaperonin OS=Bacillus cereus (strain ATCC ... [more]
CH10_BACC01.992e-1846.7410 kDa chaperonin OS=Bacillus cereus (strain AH820... [more]
CH10_BACAN1.992e-1846.7410 kDa chaperonin OS=Bacillus anthracis GN=groS PE... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1BA12RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305513 ID=DY305513; Name=DY305513; organism=Citrus sinensis; type=EST; length=1232bp
GGTTTTATCTTCTCGACTCTTCTTCAAATTTCAACTAGAAACCTTATCAA
ACTACTCGCTCGCTTCTCGCTTATCATTTCCAATCAGAATCTCTCTCGCT
CTCTCTGCATCTGCAAGCAGATGGCGACAGCTCAGCTAACAGCGTCATCA
ATTAAGGTTCCAGCAAGGAGCTTGACTTCATTCGATGGTCTCAGACCGTC
TTCCGTCAAGTTCGCTTCCGTCGGAGGTGCTCCCAGCCAACGCTCTTTCC
GTCGCTTGGTCGTTAAAGCCGCTGCAGTCGTGGCTCCCAAGTACACTTCA
ATTAAACCTTTGGGTGATAGAGTGCTGGTGAAAATCAAGACTGTAGAGGA
GAAAACTGATGGTGGTATTTTTCTGCCATCTACAGCTCAAACAAAGCCTC
AAGCAGGTGAGGTGGTAGCTGTTGGCGAGGGGAAGACAGTTGGGAAGACT
AAACTGGACATATCTGTGAAGCCTGGGACCCAGGTCATCTATTCGAAGTA
TGCAGGGACTGAGTTGGAGTTCAATGGCGCAAATCATCTCATATTGAGGG
AGGATGACGTAGTTGGCATTCTTGAAACAGATGAAATCAAGGATCTTAAG
CCCCTTAATGACAGAGTTTTCATCAAGGTTGCTGAGGCTGAGGAGACAAC
TGCTGGAGGTTTGTTGTTGACGGAGGCAAGCAAGGAGAAACCTTCCATTG
GAATGGTCATTGCTGTTGGACCCGGTCCTCTAGATGAGGAAGGTAATAGG
AAACCTCTATCCATTGCTCCAGGGAACACGGTGATGTATTCCAAGTATGC
AGGGAATGACCTTCAAGGCAGGGAGGGAACCAACTACATTGCTTTAAGAG
CTTCTGAAGTGGAGGCTGTGCTCTCTTAATTGCCGGTGGTTAACTGGACC
AAGGTTTAAAGGTATTAAGGAATGGAATTTATGGGTGAGTTGCCTCCAGG
GAAACGGAATTTTAAAGGTAACTTAATTGGAACAAAAAAAATTGCAGCTT
TGGATCAACGAATTGGCGGGTTGGTTTTTTGGCTAAAAAAAAAAAAAAAG
GGGGGGGCCCGGGACCCCCAATTCCCCCCAAAAGGGGAGCCAAAAAAAAA
TTCCCGGGGGCCGCGTCGTTTTTAAAAAGGCGGGGGCGGGGGGAAAAACC
CCGGGGGGGTTTACCCCAAAATAAAAATACCCCTCGGGGGCAGCCACACC
CCCCCCCCCTTTTCCCCCCACCGCGGGTGGGG
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