EY679048
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679048 vs. ExPASy Swiss-Prot
Match: RCA_PHAVU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.355e-40 Identity = 78/108 (72.22%), Postives = 89/108 (82.41%), Query Frame = 3 Query: 54 EVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYFSQGLRTYNLDNTINGLYIAPAFMDKLVVHITKNFMSLPNIKAPPYLGIRGG 377 E++E +QT+ DRW+GLAYD SDDQQDITRGKG VDSLFQAPM GTHYAV+SS+ Y S GLR YN DN +G YIAPAF+DKLVVHI KNFM+LPNIK P LG+ GG Sbjct: 63 EIEETQQTEGDRWRGLAYDVSDDQQDITRGKGLVDSLFQAPMDAGTHYAVISSHKYLSAGLRQYNFDNIKDGFYIAPAFLDKLVVHIAKNFMTLPNIKVPLILGVWGG 170
BLAST of EY679048 vs. ExPASy Swiss-Prot
Match: RCA_PHAAU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2) HSP 1 Score: 164.851 bits (416), Expect = 5.246e-40 Identity = 81/108 (75.00%), Postives = 90/108 (83.33%), Query Frame = 3 Query: 54 EVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYFSQGLRTYNLDNTINGLYIAPAFMDKLVVHITKNFMSLPNIKAPPYLGIRGG 377 E++E++QT +DRWKGLAYD SDDQQDITRGKG VD LFQAPM GTHYAVMSSY+Y S GLR LDN +G YIAPAF+DKLVVHITKNFM+LPNIK P LGI GG Sbjct: 63 EIEESQQTNKDRWKGLAYDISDDQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLR--QLDNIKDGFYIAPAFLDKLVVHITKNFMTLPNIKVPLILGIWGG 168
BLAST of EY679048 vs. ExPASy Swiss-Prot
Match: RCA_SOLPN (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Solanum pennellii PE=2 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.526e-39 Identity = 82/122 (67.21%), Postives = 94/122 (77.05%), Query Frame = 3 Query: 54 EVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYFSQGLRTYNLDNTINGLYIAPAFMDKLVVHITKNFMSLPNIKAPPYLGIRGG*TTRKILP*ETCFR 419 EVDE TK+DRWKGL + SDDQQDI RGKG VDSLFQAP GTGTH+A+M+SY+Y SQ L+TY LDN ++G YIAPAFMDKLVVHITKNF++LPNIK P LG+ GG K E FR Sbjct: 61 EVDE---TKEDRWKGLYDNTSDDQQDIARGKGLVDSLFQAPTGTGTHHAIMNSYEYVSQALKTYQLDNKLDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFR 179
BLAST of EY679048 vs. ExPASy Swiss-Prot
Match: RCAA_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.993e-39 Identity = 79/107 (73.83%), Postives = 89/107 (83.18%), Query Frame = 3 Query: 57 VDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYFSQGLRTYNLDNTINGLYIAPAFMDKLVVHITKNFMSLPNIKAPPYLGIRGG 377 +DE + T D+WKGLAYD SDDQQDITRGKG VDSLFQAP G GTH AV+SSY+Y SQGLR Y+ DNT+ G YIAPAFMDKLVVH++KNFM+LPNIK P LGI GG Sbjct: 52 IDEKRNT--DKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGHGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGG 156
BLAST of EY679048 vs. ExPASy Swiss-Prot
Match: RCA_SPIOL (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 2.135e-33 Identity = 71/124 (57.26%), Postives = 86/124 (69.35%), Query Frame = 3 Query: 6 FPPSKGPFLRASRLLAEVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYFSQGLRTYNLDNTINGLYIAPAFMDKLVVHITKNFMSLPNIKAPPYLGIRGG 377 FP S R + + + EN++ D+W LA D SDDQ DI RGKG VDSLFQAP GTH + SS++Y SQGLR Y++DN + YIAPAFMDKLVVHITKNF++LPNIK P LG+ GG Sbjct: 45 FPSSS----RTTSMTVKAAENEEKNTDKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKYDIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGG 164
BLAST of EY679048 vs. ExPASy Swiss-Prot
Match: RCA_CHLRE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.892e-22 Identity = 59/119 (49.58%), Postives = 74/119 (62.18%), Query Frame = 3 Query: 30 LRASRLLAEVDENKQTKQDRWKGL--AYDESDDQQDITRGKGAVDSLFQAPMGTG-THYAVMSSYDYFSQGLRTYNLDNTINGLYIAPAFMDKLVVHITKNFMSLPNIKAPPYLGIRGG 377 +R ++L KQ RW+ + D SDDQQDITRG+ VD LFQ G G TH AV+SS +Y SQ ++N N +G YI+PAF+DK+ +HI KNFM LP IK P LGI GG Sbjct: 25 VRRAQLQVVAPSRKQ--MGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGG 139
BLAST of EY679048 vs. ExPASy Swiss-Prot
Match: RCA_ARAHY (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic (Fragments) OS=Arachis hypogaea GN=RCA PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.786e-14 Identity = 40/48 (83.33%), Postives = 41/48 (85.42%), Query Frame = 3 Query: 96 GLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYFSQGLR 239 GLAYD SDDQQDITRG VDSLFQAPM GTHYAVMSSY+Y SQGLR Sbjct: 1 GLAYDISDDQQDITRGM--VDSLFQAPMNDGTHYAVMSSYEYISQGLR 46 The following BLAST results are available for this feature:
BLAST of EY679048 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >EY679048 ID=EY679048; Name=EY679048; organism=Citrus sinensis; type=EST; length=844bpback to top |