DY305501
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_ODOSI (Photosystem I assembly protein ycf4 OS=Odontella sinensis GN=ycf4 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.961e-13 Identity = 43/110 (39.09%), Postives = 58/110 (52.73%), Query Frame = 1 Query: 652 IAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPGKKPPQLRDIPL 981 I GSR+ N+FWA L G + FL+ GISSY N L +++ F PQG+V SFYG + + Y+ GTL +G N + + + I GFPGK L PL Sbjct: 10 IIGSRRFSNYFWAVFLCSGGISFLLAGISSYFKINFLPFANPKELAFIPQGLVMSFYGTLSIALAIYILGTLFWDIGSGYNEYNKVENLVKIVRKGFPGKNREILLTYPL 119
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_SOYBN (Photosystem I assembly protein ycf4 OS=Glycine max GN=ycf4 PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 3.345e-13 Identity = 51/135 (37.78%), Postives = 73/135 (54.07%), Query Frame = 1 Query: 622 WRSEYIWVEFIAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQIN------------FFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFL-WGFPGKKPPQLRDIPLEK 987 +RS+ + + +A R+ N FWA LGSL L V ISSYL +L F S++I+ F PQG +FYGIAGLF +S+ +G++ + G KKGK F+ WGFPGK + +IP+ + Sbjct: 5 FRSDDVLIYSMAEVRRTSNLFWAVFTLLGSLGLLFVAISSYLGMDL--FFISEKISDFSFIPDFIYFPFIPQGATMAFYGIAGLF-SSFYFGSIIFWDIGGGFDIFNKKGKKVRFVRWGFPGKNRRIILEIPMNE 136
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_RHDSA (Photosystem I assembly protein ycf4 OS=Rhodomonas salina GN=ycf4 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 4.368e-13 Identity = 40/103 (38.83%), Postives = 57/103 (55.34%), Query Frame = 1 Query: 646 EFIAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPGKK 954 + I GSR+ N+ W I F G + FL+ G+SSYL LL ++ I F PQGIV +FYG G+ ++ +L + G N + G + IF GFPGK+ Sbjct: 6 DLILGSRRFSNYLWTLISFSGGIGFLLAGLSSYLGVQLLPFGNTETIVFIPQGIVMTFYGTIGILLSLFLLLNISLNVGGGYNSYDKSTGAIQIFRLGFPGKR 108
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_CHLRE (Photosystem I assembly protein ycf4 OS=Chlamydomonas reinhardtii GN=ycf4 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 5.705e-13 Identity = 49/116 (42.24%), Postives = 63/116 (54.31%), Query Frame = 1 Query: 652 IAGSRKPGNFFWAFILFLGSLXFLMVGISSYLD-RNLLSL------FPSQQ-------INFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGN--NPFRTKKGKMGIFLWGFPGK 951 I G R+ N++WA ++FLGS FL GI SYL N LSL F S+ + FFPQG++ SFYG G ++ Y W L W G N F K+G + IF WG+PGK Sbjct: 13 IVGERRFSNYWWAIVIFLGSCGFLATGICSYLGIPNWLSLLNIGTTFSSETETLASGIVPFFPQGLLMSFYGSLGFLLSIY-WSLL-IFWNVGGGFNEFNKKEGFVRIFRWGYPGK 126
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_PHATR (Photosystem I assembly protein ycf4 OS=Phaeodactylum tricornutum GN=ycf4 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 9.732e-13 Identity = 41/100 (41.00%), Postives = 56/100 (56.00%), Query Frame = 1 Query: 652 IAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPGK 951 I GSR+ N+FWAF L +G L FL+ GISSY NLL + ++ F PQG+V FYG L I+ Y T+ +G N + + + + GFPGK Sbjct: 10 IIGSRRFSNYFWAFFLLVGGLGFLLAGISSYFKVNLLPFTNTTELVFIPQGLVMMFYGALSLGISIYTLLTIILDIGSGYNEYNRIENLVKVVRKGFPGK 109
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_GLOVI (Photosystem I assembly protein ycf4 OS=Gloeobacter violaceus GN=ycf4 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.271e-12 Identity = 37/100 (37.00%), Postives = 55/100 (55.00%), Query Frame = 1 Query: 652 IAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPGK 951 + GSR+P +F+A +L LG L FL G+S +++ NLL ++ + FPQG+ FYG + Y W L +G N F + K+ +F GFPGK Sbjct: 17 VPGSRRPSTYFFALVLTLGGLGFLFAGLSPFVETNLLPFSDTRGLTRFPQGVTMIFYGALATLFSLYYWLVLALDVGSGYNEFDKQNKKVTLFRRGFPGK 116
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_BIGNA (Photosystem I assembly protein ycf4 OS=Bigelowiella natans GN=ycf4 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.271e-12 Identity = 43/106 (40.57%), Postives = 57/106 (53.77%), Query Frame = 1 Query: 634 YIWVEFIAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPGK 951 +I+ + GS+K N +A +FLGS+ FL I S+LD SL + I FFPQG+V FY + GL Y T + G N F K+ + IF WGFPGK Sbjct: 5 FIYRYTVLGSKKISNLIFAIFIFLGSIFFLKASIFSFLDLKTNSL--NGNIVFFPQGLVMGFYSLLGLLFTFYSLLTFFLKIGFGYNEFNKKENVIRIFRWGFPGK 108
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: PSAI_CITSI (Photosystem I reaction center subunit VIII OS=Citrus sinensis GN=psaI PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.660e-12 Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 2 Query: 80 MTILNSFPSIFVPLVGLVFPAMAMASLFLYLEKNKIL 190 MTILNSFPSIFVPLVGLVFPAMAMASLFLYLEKNKIL Sbjct: 1 MTILNSFPSIFVPLVGLVFPAMAMASLFLYLEKNKIL 37
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_LEPTE (Photosystem I assembly protein ycf4 OS=Leptosira terrestris GN=ycf4 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 8.239e-12 Identity = 41/86 (47.67%), Postives = 54/86 (62.79%), Query Frame = 1 Query: 652 IAGSRKPGNFFWAFILFLGSLXFLMVGISSYLD-RNLLSL-----FPSQQ-----------INFFPQGIVRSFYGIAGLFINSYLW 858 I GSR+ N++WAFI+ LGS+ FL+ GISSY + +NLL L F ++ I FFPQG+V FYGI GLF++ YLW Sbjct: 31 IQGSRRFSNYWWAFIVCLGSIGFLLTGISSYFEFQNLLHLQNYFSFANEAQSSLNKVELPIILFFPQGLVMCFYGILGLFLSFYLW 116
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_EMIHU (Photosystem I assembly protein ycf4 OS=Emiliania huxleyi GN=ycf4 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.131e-11 Identity = 38/101 (37.62%), Postives = 53/101 (52.48%), Query Frame = 1 Query: 649 FIAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPGK 951 +I+GSR+ N FWA + LG L F + G SSY + NLL + I F PQGI+ FYG L + +L T+ W G ++ ++ GFPGK Sbjct: 4 YISGSRRLSNIFWALTITLGGLGFFLNGCSSYFNTNLLIFSDASSIAFIPQGIILMFYGTVALILGLFLCLTI--IWDVGFGYNDYNADQITVYRKGFPGK 102 The following BLAST results are available for this feature:
BLAST of DY305501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 131
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305501 ID=DY305501; Name=DY305501; organism=Citrus sinensis; type=EST; length=1253bpback to top |