DY305501
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_AETCO (Photosystem I assembly protein ycf4 OS=Aethionema cordifolium GN=ycf4 PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 2.543e-37 Identity = 77/112 (68.75%), Postives = 87/112 (77.68%), Query Frame = 1 Query: 616 MSWRSEYIWVEFIAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPGK 951 MSWRSE IW+E GSRK NFFWAFILFLGSL FL+VG SSYL RN++SLFPSQQI FFPQGIV SFYGIAGLFI+ YLW T+ +G + F K+G + IF WGFPGK Sbjct: 1 MSWRSESIWIELRTGSRKTSNFFWAFILFLGSLGFLLVGTSSYLGRNVISLFPSQQIIFFPQGIVMSFYGIAGLFISCYLWCTILWNVGSGYDLFDRKEGIVRIFRWGFPGK 112
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_ATRBE (Photosystem I assembly protein ycf4 OS=Atropa belladonna GN=ycf4 PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 3.322e-37 Identity = 76/112 (67.86%), Postives = 88/112 (78.57%), Query Frame = 1 Query: 616 MSWRSEYIWVEFIAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPGK 951 M+WRSE+IW+E I GSRK NF WAFILFLGSL FL+VG SSYL RNL+S FP+QQI FFPQGIV SFYGIAGLFI+SYLW T+ +G + F K+G + IF WGFPGK Sbjct: 1 MTWRSEHIWIELITGSRKISNFCWAFILFLGSLGFLLVGTSSYLGRNLISFFPTQQIVFFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKEGIVCIFRWGFPGK 112
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_CARCL (Photosystem I assembly protein ycf4 OS=Carpobrotus chilensis GN=ycf4 PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 4.338e-37 Identity = 77/112 (68.75%), Postives = 88/112 (78.57%), Query Frame = 1 Query: 616 MSWRSEYIWVEFIAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPGK 951 M+WRS+ IW+E I GSRK NF WAFILFLGSL FL+VGISSYL RNL+SLFP QQI FFPQGIV SFYGIAGLFI+SYLW T+ +G + F K+G + IF WGFPGK Sbjct: 1 MNWRSKRIWIELITGSRKISNFCWAFILFLGSLGFLLVGISSYLGRNLISLFPPQQILFFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKEGIVCIFRWGFPGK 112
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_BRAOL (Photosystem I assembly protein ycf4 OS=Brassica oleracea GN=ycf4 PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 4.338e-37 Identity = 85/176 (48.30%), Postives = 114/176 (64.77%), Query Frame = 1 Query: 616 MSWRSEYIWVEFIAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPGKKPP-----QLRDIPLEKNSCHPKKN*KKVIWVPGPFIEKNKGRGAISLKGCEGNIKAARNI*EK 1128 M+WRSE+IW++ I+GSRK NF WAF+LFLGSL F++VG SSYL RNL+S FP QQI FFPQG+V SFYGIAGLFI+ YLW T+ +G + F K+G + IF WGFPGK ++DI ++ + ++V P++E +G+GAI L + N R I +K Sbjct: 1 MTWRSEHIWIDLISGSRKKSNFCWAFLLFLGSLGFVLVGTSSYLGRNLISSFPPQQITFFPQGLVMSFYGIAGLFISCYLWCTILWNVGSGYDLFDRKEGIVRIFRWGFPGKSRRIVLRFLMKDIQSDRTEVKEGVSARRV-----PYME-IRGQGAIPLIRTDENFTTRREIEQK 170
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_NICTO (Photosystem I assembly protein ycf4 OS=Nicotiana tomentosiformis GN=ycf4 PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 5.666e-37 Identity = 76/112 (67.86%), Postives = 87/112 (77.68%), Query Frame = 1 Query: 616 MSWRSEYIWVEFIAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPGK 951 M+WRSE+IW+E I GSRK NF WAFILFLGSL FL+VG SSYL RNL+S FP QQI FFPQGIV SFYGIAGLFI+SYLW T+ +G + F K+G + IF WGFPGK Sbjct: 1 MTWRSEHIWIELITGSRKISNFCWAFILFLGSLGFLLVGTSSYLGRNLISFFPPQQIVFFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDIKEGIVCIFRWGFPGK 112
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_LOBMA (Photosystem I assembly protein ycf4 OS=Lobularia maritima GN=ycf4 PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 7.400e-37 Identity = 77/112 (68.75%), Postives = 86/112 (76.79%), Query Frame = 1 Query: 616 MSWRSEYIWVEFIAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPGK 951 MSWRSE IW+EFI GSRK NF WAFILFLGSL FL+VG SSYL RN +SLF SQQI FFPQGIV SFYGIAGLFI+ YLW T+ +G + F K+G + IF WGFPGK Sbjct: 1 MSWRSESIWIEFITGSRKTSNFCWAFILFLGSLGFLLVGTSSYLGRNFISLFASQQIIFFPQGIVMSFYGIAGLFISCYLWCTIFWNVGSGYDLFDRKEGIVRIFRWGFPGK 112
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_DRANE (Photosystem I assembly protein ycf4 OS=Draba nemorosa GN=ycf4 PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 7.400e-37 Identity = 77/112 (68.75%), Postives = 86/112 (76.79%), Query Frame = 1 Query: 616 MSWRSEYIWVEFIAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPGK 951 MSWRSE IW+EFI GSRK NF WAFILFLGSL FL+VG SSYL RN +SLF SQQI FFPQGIV SFYGIAGLFI+ YLW T+ +G + F K+G + IF WGFPGK Sbjct: 1 MSWRSESIWIEFITGSRKTSNFCWAFILFLGSLGFLLVGTSSYLGRNFISLFASQQIIFFPQGIVMSFYGIAGLFISCYLWCTILWNVGSGYDLFDRKEGIVRIFRWGFPGK 112
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_ACOCL (Photosystem I assembly protein ycf4 OS=Acorus calamus GN=ycf4 PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 7.400e-37 Identity = 76/111 (68.47%), Postives = 88/111 (79.28%), Query Frame = 1 Query: 616 MSWRSEYIWVEFIAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPG 948 M+WRSE+IW+EFI GSRK NF WA ILFLGSL FL+VG SSYL RNL+S+FPSQQI FFPQGIV SFYGIAGLFI+SYLW T+ +G + F K+G + IF WGFPG Sbjct: 1 MNWRSEHIWIEFITGSRKTSNFGWACILFLGSLGFLVVGASSYLGRNLISVFPSQQIVFFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKEGIVCIFRWGFPG 111
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_TOBAC (Photosystem I assembly protein ycf4 OS=Nicotiana tabacum GN=ycf4 PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 9.664e-37 Identity = 75/112 (66.96%), Postives = 87/112 (77.68%), Query Frame = 1 Query: 616 MSWRSEYIWVEFIAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPGK 951 M+WRSE+IW+E I GSRK NF WAFILFLGSL FL+VG SSYL RNL+S FP QQI FFPQG+V SFYGIAGLFI+SYLW T+ +G + F K+G + IF WGFPGK Sbjct: 1 MTWRSEHIWIELITGSRKISNFCWAFILFLGSLGFLLVGTSSYLGRNLISFFPPQQIIFFPQGLVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKEGIVCIFRWGFPGK 112
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_PHAAO (Photosystem I assembly protein ycf4 OS=Phalaenopsis aphrodite subsp. formosana GN=ycf4 PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 9.664e-37 Identity = 74/112 (66.07%), Postives = 88/112 (78.57%), Query Frame = 1 Query: 616 MSWRSEYIWVEFIAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPGK 951 M+WRSE+IW+E I GSRK NF WA ILFLGSL FL+VG SSYL +NL+S+FPSQQI FFPQGIV SFYGIAGLFI+SYLW T+ +G + F K+G M +F WGFPG+ Sbjct: 1 MNWRSEHIWIELITGSRKTSNFCWACILFLGSLGFLVVGTSSYLGKNLISVFPSQQILFFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKEGIMSLFRWGFPGR 112 The following BLAST results are available for this feature:
BLAST of DY305501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 131
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305501 ID=DY305501; Name=DY305501; organism=Citrus sinensis; type=EST; length=1253bpback to top |