DY305501
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_SOLLC (Photosystem I assembly protein ycf4 OS=Solanum lycopersicum GN=ycf4 PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 1.396e-35 Identity = 75/112 (66.96%), Postives = 85/112 (75.89%), Query Frame = 1 Query: 616 MSWRSEYIWVEFIAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPGK 951 M+WRS+ IW+E I GSRK NF WA ILFLGSL FL+VG SSYL RNLLS FP QQI FFPQGIV SFYGIAGLFI+SYLW T+ +G + F K+G + IF WGFPGK Sbjct: 1 MTWRSDDIWIELITGSRKISNFCWALILFLGSLGFLLVGTSSYLGRNLLSFFPPQQIIFFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKEGIVCIFRWGFPGK 112
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_SOLBU (Photosystem I assembly protein ycf4 OS=Solanum bulbocastanum GN=ycf4 PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 1.396e-35 Identity = 75/112 (66.96%), Postives = 85/112 (75.89%), Query Frame = 1 Query: 616 MSWRSEYIWVEFIAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPGK 951 M+WRS+ IW+E I GSRK NF WA ILFLGSL FL+VG SSYL RNLLS FP QQI FFPQGIV SFYGIAGLFI+SYLW T+ +G + F K+G + IF WGFPGK Sbjct: 1 MTWRSDDIWIELITGSRKISNFCWALILFLGSLGFLLVGTSSYLGRNLLSFFPPQQIIFFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKEGIVCIFRWGFPGK 112
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_HORVU (Photosystem I assembly protein ycf4 OS=Hordeum vulgare GN=ycf4 PE=3 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 1.396e-35 Identity = 72/113 (63.72%), Postives = 88/113 (77.88%), Query Frame = 1 Query: 616 MSWRSEYIWVEFIAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPGKK 954 M+WRSE+IWVE + GSRK NFFWA ILFLGSL FL+VG SSYL +N++S+ PSQ+I FFPQG+V SFYGIAGLFI+SYLW T+ +G + F K+G + IF WGFPG K Sbjct: 1 MNWRSEHIWVELLKGSRKRSNFFWACILFLGSLGFLLVGTSSYLGKNIISILPSQEILFFPQGVVMSFYGIAGLFISSYLWCTILWNVGSGYDRFDRKEGIVCIFRWGFPGIK 113
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_EUCGG (Photosystem I assembly protein ycf4 OS=Eucalyptus globulus subsp. globulus GN=ycf4 PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 1.396e-35 Identity = 84/167 (50.30%), Postives = 111/167 (66.47%), Query Frame = 1 Query: 616 MSWRSEYIWVEFIAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPGKKPP-----QLRDIPLEKNSCHPKKN*KKVIWVPGPFIEKNKGRGAISLKGCEGNI 1101 MS RSE+IW+E I GSRK NF WAFILFLGSL F++VG SSYL +NL+SL PSQQI FFPQGIV SFYGIAGLFI+SYLW T+ +G + F K+G + IF WGFPGK +++DI + + ++V+++ + KG+GA+ L + N+ Sbjct: 1 MSCRSEHIWIELIVGSRKISNFCWAFILFLGSLGFVLVGSSSYLGKNLISLVPSQQILFFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKEGIVCIFRWGFPGKNRRIFLRFRMKDIQSIRIEVKEGISARRVLYM------EIKGQGAVPLTRTDENL 161
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_OENEH (Photosystem I assembly protein ycf4 OS=Oenothera elata subsp. hookeri GN=ycf4 PE=3 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 1.823e-35 Identity = 85/165 (51.52%), Postives = 108/165 (65.45%), Query Frame = 1 Query: 616 MSWRSEYIWVEFIAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPGKKPPQLRDIPLE---KNSCHPKKN*KKVIWVPGPFIEKNKGRGAISLKGCEGNI 1101 M WRSE+IW+E I GSRK NF WAF+LFLGSL F++VG SSYL +NL+SL SQQI+FFPQG+V SFYGIAGLFI+SYLW T+ +G + F K+G + IF WGFPGK R I L K+ + K+ I+ + KG+GAI L + N+ Sbjct: 1 MIWRSEHIWIELIVGSRKISNFCWAFLLFLGSLGFVLVGTSSYLGKNLISLVSSQQIHFFPQGLVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKEGIVCIFRWGFPGKN----RRIFLRFRMKDIQSIRIEVKEGIYARRVLYMEIKGQGAIPLTRSDDNL 161
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_CHLSC (Photosystem I assembly protein ycf4 OS=Chloranthus spicatus GN=ycf4 PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 3.109e-35 Identity = 74/111 (66.67%), Postives = 85/111 (76.58%), Query Frame = 1 Query: 616 MSWRSEYIWVEFIAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPG 948 M+WRSE IW+E I GSRK NF WA ILFLGSL FL+VG SSYL +NL+SL PSQQI FFPQGIV SFYGIAGLFI+SYLW T+ +G + F K+G + IF WGFPG Sbjct: 1 MNWRSERIWIELITGSRKTSNFCWACILFLGSLGFLLVGTSSYLGKNLISLLPSQQILFFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKEGIVCIFRWGFPG 111
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_LACSA (Photosystem I assembly protein ycf4 OS=Lactuca sativa GN=ycf4 PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 6.926e-35 Identity = 75/112 (66.96%), Postives = 86/112 (76.79%), Query Frame = 1 Query: 616 MSWRSEYIWVEFIAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPGK 951 MS RSE+IW+E I G+RK NF WA ILFLGSL FL+VG SSYL RNL+SLFPSQ+I FFPQGIV SFYGIAGLFI+SYLW T+ +G + F K G + IF WGFPGK Sbjct: 1 MSCRSEHIWIEPITGARKTSNFCWAVILFLGSLGFLLVGTSSYLGRNLISLFPSQEIVFFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKDGIVCIFRWGFPGK 112
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_HELAN (Photosystem I assembly protein ycf4 OS=Helianthus annuus GN=ycf4 PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 6.926e-35 Identity = 75/112 (66.96%), Postives = 86/112 (76.79%), Query Frame = 1 Query: 616 MSWRSEYIWVEFIAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPGK 951 MS RSE+IW+E I G+RK NF WA ILFLGSL FL+VG SSYL RNL+SLFPSQ+I FFPQGIV SFYGIAGLFI+SYLW T+ +G + F K G + IF WGFPGK Sbjct: 1 MSCRSEHIWIEPIKGARKTSNFCWAIILFLGSLGFLLVGTSSYLGRNLISLFPSQEIVFFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDIKDGIVCIFRWGFPGK 112
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_PELHO (Photosystem I assembly protein ycf4 OS=Pelargonium hortorum GN=ycf4-A PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.543e-34 Identity = 73/112 (65.18%), Postives = 85/112 (75.89%), Query Frame = 1 Query: 616 MSWRSEYIWVEFIAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPGK 951 MS RSE +W+E IAGSRK NF WA ILFLGS FL+VG SSYL RN +SLFPSQQI FFPQG+V SFYGIAGLFI+SYLW T+ +G + F K+G + IF WGFPG+ Sbjct: 1 MSCRSENLWLELIAGSRKTSNFLWALILFLGSFAFLLVGTSSYLGRNWISLFPSQQILFFPQGVVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKEGIVCIFRWGFPGR 112
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_DAUCA (Photosystem I assembly protein ycf4 OS=Daucus carota GN=ycf4 PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.543e-34 Identity = 74/112 (66.07%), Postives = 85/112 (75.89%), Query Frame = 1 Query: 616 MSWRSEYIWVEFIAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPGK 951 MS RSE+IW++ I GSRK N WA ILFLGSL FL+VG SSYL RNL+SLFPSQQI FFPQGIV SFYGIAGLFI+SYLW T+ G + F K+G + +F WGFPGK Sbjct: 1 MSCRSEHIWIQPITGSRKTSNLCWAIILFLGSLGFLLVGTSSYLGRNLISLFPSQQILFFPQGIVMSFYGIAGLFISSYLWCTISWNVGGGYDRFDRKEGMVCLFRWGFPGK 112 The following BLAST results are available for this feature:
BLAST of DY305501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 131
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305501 ID=DY305501; Name=DY305501; organism=Citrus sinensis; type=EST; length=1253bpback to top |