DY305501
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_JASNU (Photosystem I assembly protein ycf4 OS=Jasminum nudiflorum GN=ycf4 PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 2.015e-34 Identity = 73/112 (65.18%), Postives = 83/112 (74.11%), Query Frame = 1 Query: 616 MSWRSEYIWVEFIAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPGK 951 MSWRSE IW+E + GSRK NF WA ILFLGSL FL+VG SSYL RN +S PSQQ FFPQGIV SFYGIAGLFI+SYLW T+ +G + F K+G + IF WGFPGK Sbjct: 1 MSWRSEDIWIELLTGSRKLSNFCWALILFLGSLGFLLVGTSSYLGRNWISFVPSQQFIFFPQGIVMSFYGIAGLFISSYLWCTISWNIGSGYDRFDRKEGIVCIFRWGFPGK 112
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_CUSRE (Photosystem I assembly protein ycf4 OS=Cuscuta reflexa GN=ycf4 PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 4.489e-34 Identity = 71/111 (63.96%), Postives = 83/111 (74.77%), Query Frame = 1 Query: 616 MSWRSEYIWVEFIAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPG 948 MSWRSE+IW++ I GSRK N WAF LFLGSL F++VG SYL RNL+S FP QQI FFPQGIV SFYGIAGLFI+SYLW T+ +G + F K+G + IF WGFPG Sbjct: 1 MSWRSEHIWIDLITGSRKISNLCWAFTLFLGSLGFVLVGTYSYLGRNLISFFPLQQIIFFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDLFNRKEGIVCIFRWGFPG 111
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_AEGTA (Photosystem I assembly protein ycf4 OS=Aegilops tauschii GN=ycf4 PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 2.228e-33 Identity = 73/115 (63.48%), Postives = 88/115 (76.52%), Query Frame = 1 Query: 616 MSWRSEYIWVEFIAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGN--NPFRTKKGKMGIFLWGFPGKK 954 M+WRSE+IWVE + GSRK GNFFWA ILFLGSL FL VGISSYL +N++S+ PSQ+I FFPQG+V SFYGIAGLFI+SYL T+ W G+ + F K+G + IF W FPG K Sbjct: 1 MNWRSEHIWVELLKGSRKRGNFFWACILFLGSLGFLSVGISSYLGKNIISILPSQEILFFPQGVVMSFYGIAGLFISSYLCCTI--LWNVGSDYDRFDRKEGIVCIFRWEFPGIK 113
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_PINTH (Photosystem I assembly protein ycf4 OS=Pinus thunbergii GN=ycf4 PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 4.646e-31 Identity = 68/111 (61.26%), Postives = 80/111 (72.07%), Query Frame = 1 Query: 616 MSWRSEYIWVEFIAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPG 948 M+ RS+++W+E I GSRK NFFWA ILFLGSL F +VGISSY NL+ L SQQI F PQGIV FYGIAGLFI+SYLW T+ +G N F KKG + +F WGFPG Sbjct: 1 MNRRSKWLWIEPITGSRKRSNFFWACILFLGSLGFFLVGISSYFGENLIPLLSSQQILFVPQGIVMCFYGIAGLFISSYLWCTILFNVGSGYNKFDKKKGIVCLFRWGFPG 111
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_PINKO (Photosystem I assembly protein ycf4 OS=Pinus koraiensis GN=ycf4 PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 4.646e-31 Identity = 68/111 (61.26%), Postives = 80/111 (72.07%), Query Frame = 1 Query: 616 MSWRSEYIWVEFIAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPG 948 M+ RS+++W+E I GSRK NFFWA ILFLGSL F +VGISSY NL+ L SQQI F PQGIV FYGIAGLFI+SYLW T+ +G N F KKG + +F WGFPG Sbjct: 1 MNRRSKWLWIEPITGSRKRSNFFWACILFLGSLGFFLVGISSYFGENLIPLLSSQQILFVPQGIVMCFYGIAGLFISSYLWCTILFNVGSGYNKFDKKKGIVCLFRWGFPG 111
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_CYCTA (Photosystem I assembly protein ycf4 OS=Cycas taitungensis GN=ycf4 PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 4.348e-29 Identity = 63/112 (56.25%), Postives = 81/112 (72.32%), Query Frame = 1 Query: 616 MSWRSEYIWVEFIAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPGK 951 M+WRSE++W+E I GSR+ NF A ILF GSL F +VGISSYL +NL+ + SQQI F PQGIV FYGIAGLFI+SYLW T+ +G + F ++G + +F WGFPG+ Sbjct: 1 MNWRSEWLWIEPITGSRRTSNFCRACILFFGSLGFFLVGISSYLGKNLIPVLSSQQILFVPQGIVMCFYGIAGLFISSYLWCTILWNVGSGYDKFDEEEGIVCLFRWGFPGR 112
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_WELMI (Photosystem I assembly protein ycf4 OS=Welwitschia mirabilis GN=ycf4 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.547e-26 Identity = 64/123 (52.03%), Postives = 80/123 (65.04%), Query Frame = 1 Query: 616 MSWRSEYIWVEFIAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPGKKPPQLRDIPLE 984 M+ +S+ +W+E I GSR+ NFF+A ILF G+L F +VG SSYL RNLL L SQQI F PQGIV FYGIAGLF +SYLW T+ +G N K G + +F WGFPG+ PL+ Sbjct: 1 MNNQSKRLWIEPIQGSRRKSNFFFASILFGGALGFFLVGFSSYLGRNLLPLLSSQQIIFVPQGIVMCFYGIAGLFFSSYLWCTIFFNVGSGYNQIDEKTGIVCLFRWGFPGRNRRIFLRFPLK 123
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_STAPU (Photosystem I assembly protein ycf4 OS=Staurastrum punctulatum GN=ycf4 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.547e-26 Identity = 53/112 (47.32%), Postives = 77/112 (68.75%), Query Frame = 1 Query: 616 MSWRSEYIWVEFIAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPGK 951 M +SE++W+E + GSR+ N FWA ++ LG+L F++VG+SSYL+++++S PSQ I F PQG+V FYGI G F++ YLW + +G N F +G + IF WGFPGK Sbjct: 1 MDTKSEFLWIEKVVGSRRFSNVFWALVVLLGALGFILVGLSSYLNKDIISFLPSQSITFTPQGLVMCFYGIGGFFLSLYLWFAILWDVGSGYNEFDRCEGVISIFRWGFPGK 112
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_ANTFO (Photosystem I assembly protein ycf4 OS=Anthoceros formosae GN=ycf4 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.547e-26 Identity = 59/112 (52.68%), Postives = 74/112 (66.07%), Query Frame = 1 Query: 616 MSWRSEYIWVEFIAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPGK 951 M+W SE+ +E I GSR+ NFFWAFIL G+L FL VG+SSY ++L+S +QI F PQGIV FYGIAG + YLWGT+ +G N F KG + I+ WGFPGK Sbjct: 1 MNWESEWFRIELIRGSRRISNFFWAFILLSGALGFLSVGLSSYFGKDLISFLSYEQIVFIPQGIVMCFYGIAGSAFSLYLWGTIFWNIGSGYNKFDKGKGIVCIYRWGFPGK 112
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_MARPO (Photosystem I assembly protein ycf4 OS=Marchantia polymorpha GN=ycf4 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 4.500e-26 Identity = 59/112 (52.68%), Postives = 75/112 (66.96%), Query Frame = 1 Query: 616 MSWRSEYIWVEFIAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPGK 951 M+ + ++I V+FI GSR+ NF WAFIL G+L F VG SSYL ++L+ ++QI F PQGIV FYGIAGLFI+ YLW T+ +G N F +KG IF WGFPGK Sbjct: 1 MNLQVDHIRVDFIIGSRRISNFCWAFILLFGALGFFFVGFSSYLQKDLIPFLSAEQILFIPQGIVMCFYGIAGLFISFYLWCTICWNVGSGYNKFDKQKGIFSIFRWGFPGK 112 The following BLAST results are available for this feature:
BLAST of DY305501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 131
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305501 ID=DY305501; Name=DY305501; organism=Citrus sinensis; type=EST; length=1253bpback to top |