DY305501
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_CHAGL (Photosystem I assembly protein ycf4 OS=Chaetosphaeridium globosum GN=ycf4 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.002e-25 Identity = 56/112 (50.00%), Postives = 78/112 (69.64%), Query Frame = 1 Query: 616 MSWRSEYIWVEFIAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPGK 951 M+ +SE+ V+FI G+R+ N+FWA ++FLGSL F +VG+SSYL +N++ + I F PQGIV FYGIAGLF++ YLW T+ +G N F KKG + IF WG+PG+ Sbjct: 1 MNIKSEFFRVDFIIGARRLSNYFWATVVFLGSLGFFIVGVSSYLQKNIVFFLSASDILFTPQGIVMCFYGIAGLFLSFYLWFTIFLDIGSGYNEFDKKKGIISIFRWGYPGQ 112
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_HUPLU (Photosystem I assembly protein ycf4 OS=Huperzia lucidula GN=ycf4 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 1.309e-25 Identity = 59/112 (52.68%), Postives = 78/112 (69.64%), Query Frame = 1 Query: 616 MSWRSEYIWVEFIAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPGK 951 M+W+SE++ VE I GSR+ NF WA I LG+L F +VGI SYL ++L+ + PSQQI F PQGIV FYGIAGLF + YLW T+ +G N F ++G + +F WGFPG+ Sbjct: 1 MNWQSEWLRVEPIMGSRRISNFCWACITSLGALGFFLVGIPSYLGKDLIPVLPSQQIVFVPQGIVMCFYGIAGLFPSFYLWCTILWNVGSGYNIFDKREGIICLFRWGFPGE 112
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_PSINU (Photosystem I assembly protein ycf4 OS=Psilotum nudum GN=ycf4 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.710e-25 Identity = 64/114 (56.14%), Postives = 78/114 (68.42%), Query Frame = 1 Query: 616 MSWRSEYIWVEFIAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGN--NPFRTKKGKMGIFLWGFPGK 951 M +SE+I VE I G+R+ NFFWAFIL LG+L FL+VG SSYL R+L+ L PSQQI F PQGIV FYGIAG+ I YL + W GN N F ++G + IF WGFPG+ Sbjct: 1 MKRQSEWIRVESIRGARRISNFFWAFILILGALGFLLVGSSSYLGRDLIPLLPSQQIVFIPQGIVMCFYGIAGISIGFYLGFAI--SWDIGNGYNLFDKQRGIVRIFRWGFPGE 112
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_PHYPA (Photosystem I assembly protein ycf4 OS=Physcomitrella patens GN=ycf4 PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 2.233e-25 Identity = 57/112 (50.89%), Postives = 74/112 (66.07%), Query Frame = 1 Query: 616 MSWRSEYIWVEFIAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPGK 951 M+ S+++WVE I GSR+ NF WA IL G+L F VGISSY ++L+ SQQI F PQG+V FYGIAGLF++ YLW T+ +G N F KK + +F WGFPG+ Sbjct: 1 MNRESDWLWVEPIMGSRRVSNFCWAAILLFGALGFFFVGISSYFGKDLIPFLSSQQILFVPQGVVMCFYGIAGLFLSFYLWCTIFWNVGSGYNKFDKKKKIVSLFRWGFPGE 112
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_ANGEV (Photosystem I assembly protein ycf4 OS=Angiopteris evecta GN=ycf4 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 6.498e-25 Identity = 55/112 (49.11%), Postives = 78/112 (69.64%), Query Frame = 1 Query: 616 MSWRSEYIWVEFIAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPGK 951 M+++SE++ ++ I GSR+ N WAFIL LG++ F +VG SSYL R+L+ + SQQI F PQGIV FYGIAG+F+ YLW T+ +G N F ++G + +F WGFPG+ Sbjct: 1 MNYQSEWLRIDPIKGSRRFSNLCWAFILVLGAIGFSLVGFSSYLGRDLIPILSSQQIIFLPQGIVMCFYGIAGIFLGFYLWCTILWNVGSGYNQFNKREGIVYLFRWGFPGE 112
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_CUSOB (Photosystem I assembly protein ycf4 OS=Cuscuta obtusiflora GN=ycf4 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.108e-24 Identity = 58/112 (51.79%), Postives = 74/112 (66.07%), Query Frame = 1 Query: 616 MSWRSEYIWVEFIAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPGK 951 MSWRSE IW+E I GSR+ NF WAFILF GSL F++VG +SYL +NL++ FFPQG+V +FYGI+GLFI+ YL L G + F +G + IF W FPG+ Sbjct: 1 MSWRSEQIWIELIPGSRRESNFLWAFILFFGSLEFILVGTASYLRQNLIA--------FFPQGMVMTFYGISGLFISLYLLSMLFWNVGGGYHQFDKTRGVICIFRWVFPGR 104
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_CUSGR (Photosystem I assembly protein ycf4 OS=Cuscuta gronovii GN=ycf4 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 2.469e-24 Identity = 58/112 (51.79%), Postives = 72/112 (64.29%), Query Frame = 1 Query: 616 MSWRSEYIWVEFIAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPGK 951 MSWRSE IW+E I GSR+ NF WAFILF GSL F++VG +SY +NL++ FFPQG+V FYGI+GLFI+ YL L G N F +G + IF W FPG+ Sbjct: 1 MSWRSEQIWIELIPGSRRGSNFVWAFILFFGSLEFILVGTASYFSQNLIA--------FFPQGMVMIFYGISGLFISLYLSSMLFWNVGGGYNQFDKTRGVICIFRWVFPGR 104
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_STIHE (Photosystem I assembly protein ycf4 OS=Stigeoclonium helveticum GN=ycf4 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.355e-22 Identity = 51/100 (51.00%), Postives = 65/100 (65.00%), Query Frame = 1 Query: 652 IAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPGK 951 I GSR+ N++WA ++FLG++ FL G+SSY +NLL Q I FFPQG+V SFYGI GL ++ YLW T+ G N F K G + IF WGFPGK Sbjct: 12 ITGSRRLSNYWWASVVFLGAIGFLFTGLSSYFGQNLLPFLQVQNITFFPQGLVMSFYGILGLLLSIYLWLTIIWNVGGGFNEFNKKAGAIRIFRWGFPGK 111
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_LOTJA (Photosystem I assembly protein ycf4 OS=Lotus japonicus GN=ycf4 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.018e-22 Identity = 54/115 (46.96%), Postives = 74/115 (64.35%), Query Frame = 1 Query: 619 SWRSEYIWVEFIAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSL----FPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPGK 951 +W+SE + V+F+ G R P +FFWAFI LGS+ FL+V SSYL +N LS F S+ I F PQG + YG AGLF++ +LW T+ +G + F K+G + IF +GFPGK Sbjct: 8 TWQSEEVRVDFVTGCRNPRDFFWAFITLLGSVGFLLVAASSYLHKNFLSFISSEFDSELIRFLPQGATITVYGTAGLFVSLFLWLTIFWNVGSGYDLFDKKRGIVCIFRYGFPGK 122
BLAST of DY305501 vs. ExPASy Swiss-Prot
Match: YCF4_CHAVU (Photosystem I assembly protein ycf4 OS=Chara vulgaris GN=ycf4 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.163e-20 Identity = 51/109 (46.79%), Postives = 70/109 (64.22%), Query Frame = 1 Query: 625 RSEYIWVEFIAGSRKPGNFFWAFILFLGSLXFLMVGISSYLDRNLLSLFPSQQINFFPQGIVRSFYGIAGLFINSYLWGTL*GRWVTGNNPFRTKKGKMGIFLWGFPGK 951 +S+ +E I GSRK N+FW+F +F G+ FL+VGI SYL + L F ++ I F PQG V FYGIAG+F++ YLW T+ +G N F +G + IF WGFPG+ Sbjct: 7 KSQVFRLEPIIGSRKYINYFWSFSIFFGAFGFLIVGICSYLKKELF-FFSAENIIFIPQGAVMCFYGIAGIFLSFYLWFTMILGVGSGFNEFNKNEGIVNIFRWGFPGQ 114 The following BLAST results are available for this feature:
BLAST of DY305501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 131
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305501 ID=DY305501; Name=DY305501; organism=Citrus sinensis; type=EST; length=1253bpback to top |