DY305496
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: CFTR_GORGO (Cystic fibrosis transmembrane conductance regulator OS=Gorilla gorilla gorilla GN=CFTR PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 9.381e-35 Identity = 86/253 (33.99%), Postives = 134/253 (52.96%), Query Frame = 2 Query: 14 VENRMVSVERIKQFTEIPSEAAWKMEDRLPPPN-------------------WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715 V++ M SV R+ +F ++P+E + P N WP+ G + + DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ S+ L R FG+IPQ+ +F GT R N+DP Q+SD+EIWK + L+ V+ P KLD ++ D G S G +QL+ L R +L +++L +DE +A +D T I+R +++ A CT+I HR Sbjct: 1153 VDSLMRSVSRVFKFIDMPTEDK-PTKSTKPYKNGQLSKVMIIENSHVKKDDIWPSGGQMTVKDLTAKYTEGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLNTEGEIQIDGVSWDSIT-LQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRTLKQAFADCTVILCEHR 1403
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: CFTR_CALJA (Cystic fibrosis transmembrane conductance regulator OS=Callithrix jacchus GN=CFTR PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 9.381e-35 Identity = 85/253 (33.60%), Postives = 133/253 (52.57%), Query Frame = 2 Query: 14 VENRMVSVERIKQFTEIPSEAAWKMEDRLPPPN-------------------WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715 V++ M SV R+ +F ++P+E + N WP+ G + + DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ S+ L R FG+IPQ+ +F GT R N+DP Q+SD+EIWK + L+ V+ P KLD ++ D G S G +QL+ L R +L +++L +DE +A +D T I+R +++ A CT+I HR Sbjct: 1153 VDSLMRSVSRVFKFIDMPTEEGKPTKSTKAYKNGQLSKVMIIENSHVKKDDIWPSGGQMTIKDLTAKYIEGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLNTEGEIQIDGVSWDSIT-LQQWRKAFGVIPQKVFIFTGTFRKNLDPYEQWSDQEIWKVADEVGLRTVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRALKQAFADCTVILCEHR 1404
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: CFTR_ATEAB (Cystic fibrosis transmembrane conductance regulator OS=Atelerix albiventris GN=CFTR PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 9.381e-35 Identity = 85/253 (33.60%), Postives = 134/253 (52.96%), Query Frame = 2 Query: 14 VENRMVSVERIKQFTEIPSEAAWKMEDRLPPPN-------------------WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715 V++ M SV R+ +F ++P+E + P WP+ G + + DL +Y + +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ S+ L R FG+IPQ+ +F GT R N+DP Q++D+EIWK + L+ V+ P KLD ++ D G S G +QL+ L R +L +++L +DE +A +D T I+R I++ A CT+I HR Sbjct: 1155 VDSLMRSVSRVFKFIDMPTEEIKPSKPVKPSKEGPLSKVMIIENEHVKKDDIWPSGGQMTVKDLTAKYIESGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLNTEGEIQIDGVSWDSIT-LQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWNDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGYVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQIIRRTIKQAFADCTVILCEHR 1406
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: CFTR_AOTNA (Cystic fibrosis transmembrane conductance regulator OS=Aotus nancymaae GN=CFTR PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 9.381e-35 Identity = 85/253 (33.60%), Postives = 133/253 (52.57%), Query Frame = 2 Query: 14 VENRMVSVERIKQFTEIPSEAAWKMEDRLPPPN-------------------WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715 V++ M SV R+ +F ++P+E + N WP+ G + + DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ S+ L R FG+IPQ+ +F GT R N+DP Q+SD+EIWK + L+ V+ P KLD ++ D G S G +QL+ L R +L +++L +DE +A +D T I+R +++ A CT+I HR Sbjct: 1153 VDSLMRSVSRVFKFIDMPTEEGKPTKSTKAYRNGQLSKVMIIENSHVKKDDIWPSGGQMTIKDLTAKYIEGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLNTEGEIQIDGVSWDSIT-LQQWRKAFGVIPQKVFIFTGTFRKNLDPYEQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRALKQAFADCTVILCEHR 1404
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: CFTR_SHEEP (Cystic fibrosis transmembrane conductance regulator OS=Ovis aries GN=CFTR PE=1 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 2.090e-34 Identity = 85/253 (33.60%), Postives = 133/253 (52.57%), Query Frame = 2 Query: 14 VENRMVSVERIKQFTEIPSEAAWKMEDRLPPPN-------------------WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715 V++ M SV R+ +F ++P+E P + WP+ G + + DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ S+ L R FG+IPQ+ +F GT R N+DP Q+SD+EIWK + L+ V+ P KLD ++ D G S G +QL+ L R +L +++L +DE +A +D T I+R +++ A CT+I HR Sbjct: 1153 VDSLMRSVSRVFKFIDMPTEDGKPNNSFRPSKDSQPSKVMIIENQHVKKDDIWPSGGQMTVKDLTAKYIDGGNAILENISFSISPGQRVGLLGRTGSGKSTLLLAFLRLLNTKGEIQIDGVSWDSIT-LQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQIIRRTLKQAFADCTVILSEHR 1404
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: CFTR_PANTR (Cystic fibrosis transmembrane conductance regulator OS=Pan troglodytes GN=CFTR PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 2.090e-34 Identity = 85/253 (33.60%), Postives = 133/253 (52.57%), Query Frame = 2 Query: 14 VENRMVSVERIKQFTEIPSEAAWKMEDRLPPPN-------------------WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715 V++ M SV R+ +F ++P+E + P N WP+ G + + DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ S+ L R FG+IPQ+ +F GT R N+DP Q+SD+EIWK + L+ V+ P KLD ++ D G S G +QL+ L R +L +++L +DE +A +D I+R +++ A CT+I HR Sbjct: 1153 VDSLMRSVSRVFKFIDMPTEGK-PTKSTKPYKNGQLSKVMIIENSHVKKDYIWPSGGQMTVKDLTAKYTEGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLNTEGEIQIDGVSWDSIT-LQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVAYQIIRRTLKQAFADCTVILCEHR 1403
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: CFTR_HYLLE (Cystic fibrosis transmembrane conductance regulator OS=Hylobates leucogenys GN=CFTR PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 2.090e-34 Identity = 85/253 (33.60%), Postives = 133/253 (52.57%), Query Frame = 2 Query: 14 VENRMVSVERIKQFTEIPSEAAWKMEDRLPPPN-------------------WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715 V++ M SV R+ +F ++P+E + P N WP+ G + + DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ RL+ S+ L R FG+IPQ+ +F GT R N+DP Q+SD+EIWK + L+ V+ P KLD ++ D G S G +QL+ L R +L +++L +DE +A +D T I+R +++ A CT+I HR Sbjct: 1153 VDSLMRSVSRVFKFIDMPTEGK-PTKSTKPYKNGQLSKVMIIENSHVKKDDIWPSGGQMTVKDLSAKYTEGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSALLRLLNTEGEIQIDGVSWDSIT-LQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRTLKQAFADCTVILCEHR 1403
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: CFTR_CALMO (Cystic fibrosis transmembrane conductance regulator OS=Callicebus moloch GN=CFTR PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 2.729e-34 Identity = 86/252 (34.13%), Postives = 138/252 (54.76%), Query Frame = 2 Query: 14 VENRMVSVERIKQFTEIPSEA-------AWK---------MEDRLPPPN--WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715 V++ M SV R+ +F ++P+E A+K +E+ + WP+ G + + DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ S+ L R FG+IPQ+ +F GT R N+DP Q+SD+E+WK + L+ V+ P KLD ++ D G S G +QL+ L R +L +++L +DE +A +D T I+R +++ A CT+I HR Sbjct: 1153 VDSLMRSVSRVFKFIDMPTEGKPTKSTKAYKNGQLSKVMIIENSHVKKDDIWPSGGQMTIKDLTAKYIEGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLNTEGEIQIDGVSWDSVT-LQQWRKAFGVIPQKVFIFTGTFRKNLDPYEQWSDQEVWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRALKQAFADCTVILCEHR 1403
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: CFTR_CARPS (Cystic fibrosis transmembrane conductance regulator OS=Carollia perspicillata GN=CFTR PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 4.656e-34 Identity = 85/253 (33.60%), Postives = 134/253 (52.96%), Query Frame = 2 Query: 14 VENRMVSVERIKQFTEIPSEAAWKMEDRLPPPN-------------------WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715 V++ M SV R+ +F ++P+E + + P + WP G + + +L +Y N +L+ I+ SI G+++G++GRTGSGKSTL+ RL+ S+ L R FG+IPQ+ +F GT R N+DP Q++DEEIWK + L+ V+ P KLD ++ D G S G +QLL L R +L +++L +DE +A +D T I+R +++ A CT+I HR Sbjct: 1154 VDSLMRSVSRVFKFIDMPTEESKSTKLIKPSKDDKLTKVMIIENQHVKKDDLWPLGGQMTIKNLIAKYTDNGNAILENISFSISPGQRVGLLGRTGSGKSTLLSALLRLLNTEGEIQIDGVSWDSVT-LQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWNDEEIWKVADEVGLRSVIEQFPGKLDFVLLDGGFVLSHGHKQLLCLARSVLSKAKILLLDEPSAHLDPITYQIIRRTLKQAFADCTVILSEHR 1405
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: CFTR_RHIFE (Cystic fibrosis transmembrane conductance regulator OS=Rhinolophus ferrumequinum GN=CFTR PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 7.941e-34 Identity = 82/253 (32.41%), Postives = 134/253 (52.96%), Query Frame = 2 Query: 14 VENRMVSVERIKQFTEIPSEAAWKMEDRLPPPN-------------------WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715 V++ M SV R+ +F ++P+E + + P + WP+ G + + DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ RL+ S+ + R FG+IPQ+ +F GT R N+DP GQ++D+EIWK + L+ V+ P LD ++ D G S G +QL+ L R +L +++L +DE +A +D T I+R +++ A CT+I HR Sbjct: 1154 VDSLMRSVSRVFKFIDMPAEESKYTKSVKPYKDGQLSKVMILENQHVKKDDIWPSGGQITVKDLTAKYIDGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSALLRLLNTEGEIQVDGVSWESVT-VQQWRRAFGVIPQKVFIFSGTFRKNLDPYGQWNDQEIWKVADEVGLRSVIEQFPGNLDFVLVDGGFVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQIIRRALKQAFADCTVILCEHR 1405 The following BLAST results are available for this feature:
BLAST of DY305496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 469
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305496 ID=DY305496; Name=DY305496; organism=Citrus sinensis; type=EST; length=1285bpback to top |