DY305496

Overview
NameDY305496
Unique NameDY305496
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1285
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: MRP2_RABIT (Canalicular multispecific organic anion transporter 1 OS=Oryctolagus cuniculus GN=ABCC2 PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 2.997e-57
Identity = 114/238 (47.90%), Postives = 153/238 (64.29%), Query Frame = 2
Query:    2 MSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715
            M+   E  +V+VERI ++ ++ +EA W + D+ PP  WP  G +   + QVRYR    LVLKGI   I   EKIGVVGRTG+GKS+L    FR++E +           + +GLHDLR +  IIPQ+PVLF G++R N+DP   YSDEEIW++LE   LK  VA     L   V+++ DN S+GQRQLL LGR +L+ S++L +DEATA+VD +TD  IQ  IR E + CT+I I HR
Sbjct: 1256 MTSETETNIVAVERITEYIKVENEAPW-VTDKRPPAGWPHKGEIQFSNYQVRYRPELDLVLKGINCDIKSMEKIGVVGRTGAGKSSLTNCLFRILEAAGGHITIDGIDIASIGLHDLRGKLTIIPQDPVLFSGSLRMNLDPFNNYSDEEIWRALELAHLKSFVAGLQHGLSREVSEAEDNLSIGQRQLLCLGRALLRKSKILVLDEATAAVDLETDHLIQTTIRNEFSHCTVITIAHR 1492          
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: ABCC3_DICDI (ABC transporter C family member 3 OS=Dictyostelium discoideum GN=abcC3 PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 3.313e-56
Identity = 111/233 (47.64%), Postives = 149/233 (63.95%), Query Frame = 2
Query:   17 ENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715
            E +M SVERI  + + P EA   +ED  P P+WP HG +   +L +RYR     VLKGI+  I   EKIG+VGRTG+GKS+++   FRL+E S           +  GL DLR    IIPQ+PVLF GT+R NIDP  + +D+++W  L+  QL DV  +    LDS V ++GDNWSVGQRQLL L R +L+  ++L +DEATASVD  +D+ IQ  IR++ + CTI+ I HR
Sbjct: 1024 ETKMNSVERITHYIKGPVEALQIVEDHRPAPDWPPHGAITFDNLVMRYREGLDPVLKGISCEIKAKEKIGIVGRTGAGKSSIVLALFRLIEASEGAILIDGENIAKFGLKDLRRNLAIIPQDPVLFSGTLRENIDPFNEKTDDQLWSVLKDIQLHDVAKSLEGGLDSKVTENGDNWSVGQRQLLCLARALLRDPKILVLDEATASVDGHSDSLIQATIREKFSNCTILTIAHR 1256          
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: ABCC8_DICDI (ABC transporter C family member 8 OS=Dictyostelium discoideum GN=abcC8 PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 5.652e-56
Identity = 110/238 (46.22%), Postives = 155/238 (65.13%), Query Frame = 2
Query:    2 MSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715
            MSC +EN +VS+ERI+++  +PSEA     D+  P +WP+HG +   +L + YR     VL+GI  +I    K+G+VGRTG+GKS+L Q  FRLVEP            + +GL+ LRSR  IIPQ+PVLF G+VR N+DP  QY D EIW+++E   L   +      LD++V D GDN+SVGQRQLL +GR +LK + ++ +DEA++S+D  +DA IQ  IR + A CT++ I HR
Sbjct: 1302 MSCDLENSVVSIERIQEYCLLPSEAPL-FNDKSVPMSWPSHGKIVFKNLWLTYREGLDPVLRGINCTIEPKTKVGIVGRTGAGKSSLTQALFRLVEPLRGTIEIDGIDITELGLNPLRSRMAIIPQDPVLFAGSVRYNLDPFDQYDDHEIWEAIENAHLLKAIKDLDGGLDAMVQDGGDNFSVGQRQLLVIGRALLKKANIIVLDEASSSIDIASDALIQETIRTKFADCTVLTIAHR 1538          
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: AB12C_ARATH (ABC transporter C family member 12 OS=Arabidopsis thaliana GN=ABCC12 PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 5.652e-56
Identity = 108/233 (46.35%), Postives = 154/233 (66.09%), Query Frame = 2
Query:   17 ENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715
            EN + SVER+  + ++PSEA   +E+  P   WP+ G++   D+ +RYR   P VL G+T  +   EK+GVVGRTG+GKS+++   FR+VE             +  GL D+R    IIPQ PVLF GTVR NIDP  +++D  +W++L R  +KDV++  P  LD+ V + G+N+SVGQRQLLSL R +L+ S++L +DEATASVD +TD+ IQR IR+E  +CT++ I HR
Sbjct: 1197 ENSLNSVERVGNYIDLPSEATDIIENNRPVCGWPSGGSIKFEDVHLRYRPGLPPVLHGLTFFVSPSEKVGVVGRTGAGKSSMLNALFRIVEVEKGRIMIDDCDVAKFGLTDVRRVLSIIPQSPVLFSGTVRFNIDPFSEHNDAGLWEALHRAHIKDVISRNPFGLDAEVCEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTMLVIAHR 1429          
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: ABC2_SCHPO (ATP-binding cassette transporter abc2 OS=Schizosaccharomyces pombe GN=abc2 PE=1 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.818e-54
Identity = 113/234 (48.29%), Postives = 146/234 (62.39%), Query Frame = 2
Query:   14 VENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715
            VE  +VSVER+ ++  +PSEA   + D  PP  WP+HG +      VRYR N PLVL  I+++I   EKIG+VGRTG+GKSTL    FRL+EP+           + +GLHDLRSR  IIPQE   FEGT+R N+DP    +DEEIW +LE   LK  +      L S V + G N S GQRQL+ L R +L  +R+L +DEATA+VD +TDA +QR IR+     TI+ I HR
Sbjct: 1200 VETNIVSVERMLEYIGLPSEAPSIIPDHRPPEGWPSHGAIKFDHYSVRYRENLPLVLNDISVNIKPQEKIGIVGRTGAGKSTLTLALFRLIEPTSGDIQLDDINITSIGLHDLRSRLAIIPQENQAFEGTIRENLDPNANATDEEIWHALEAASLKQFIQTLDGGLYSRVTEGGANLSSGQRQLMCLTRALLTPTRVLLLDEATAAVDVETDAIVQRTIRERFNDRTILTIAHR 1433          
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: ABCCB_HUMAN (ATP-binding cassette transporter sub-family C member 11 OS=Homo sapiens GN=ABCC11 PE=1 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 2.374e-54
Identity = 108/236 (45.76%), Postives = 152/236 (64.41%), Query Frame = 2
Query:   17 ENRMVSVERIKQFTEI-PSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHRDT 721
            E +  +VERI Q+ ++  SEA   ME    P  WP HG +   D  ++YR NTP VL GI L+I G E +G+VGRTGSGKS+L    FRLVEP              +GL DLRS+  +IPQ+PVL  GT+R N+DP  +++D++IW +LER  L   ++  P KL + V ++G N+SVG+RQLL + R +L++S+++ +DEATAS+D +TD  IQR IR+    CT++ I HR T
Sbjct: 1102 EAQFTAVERILQYMKMCVSEAPLHMEGTSCPQGWPQHGEIIFQDYHMKYRDNTPTVLHGINLTIRGHEVVGIVGRTGSGKSSLGMALFRLVEPMAGRILIDGVDICSIGLEDLRSKLSVIPQDPVLLSGTIRFNLDPFDRHTDQQIWDALERTFLTKAISKFPKKLHTDVVENGGNFSVGERQLLCIARAVLRNSKIILIDEATASIDMETDTLIQRTIREAFQGCTVLVIAHRVT 1337          
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: YCFI_YEAST (Metal resistance protein YCF1 OS=Saccharomyces cerevisiae GN=YCF1 PE=1 SV=2)

HSP 1 Score: 209.92 bits (533), Expect = 2.625e-53
Identity = 111/239 (46.44%), Postives = 151/239 (63.18%), Query Frame = 2
Query:    2 MSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKD-VVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715
            M+  VE  +VSVERIK++ ++ SEA   +E   PP  WP+ G++   +   RYR    LVLK I + I   EK+G+VGRTG+GKS+L    FR++E S           + +GL+DLR +  IIPQ+  +FEGTVR NIDPI QY+DE IW++LE   LK+ V++   D LD+ + + G N SVGQRQLL L R ML  S++L +DEATA+VD +TD  +Q  IR      TI+ I HR
Sbjct: 1229 MTVEVETNIVSVERIKEYADLKSEAPLIVEGHRPPKEWPSQGDIKFNNYSTRYRPELDLVLKHINIHIKPNEKVGIVGRTGAGKSSLTLALFRMIEASEGNIVIDNIAINEIGLYDLRHKLSIIPQDSQVFEGTVRENIDPINQYTDEAIWRALELSHLKEHVLSMSNDGLDAQLTEGGGNLSVGQRQLLCLARAMLVPSKILVLDEATAAVDVETDKVVQETIRTAFKDRTILTIAHR 1467          
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: MRP9_MOUSE (Multidrug resistance-associated protein 9 OS=Mus musculus GN=Abcc12 PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 3.429e-53
Identity = 95/204 (46.57%), Postives = 143/204 (70.10%), Query Frame = 2
Query:  104 PPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715
            P +WP+ G +   D ++RYR NTPLVL G+ L+I  G+ +G+VGRTGSGKS+L    FRLVEP+             +GL DLR++  +IPQ+PVLF GTVR N+DP+G ++DE +W  LER  ++D +   P+KL + V ++G+N+SVG+RQLL + R +L++S+++ +DEATAS+DS+TD  +Q  I++   +CT++ I HR
Sbjct: 1118 PKDWPSRGEITFKDYRMRYRDNTPLVLDGLNLNIQSGQTVGIVGRTGSGKSSLGMALFRLVEPASGTIIIDEVDICTVGLEDLRTKLTMIPQDPVLFVGTVRYNLDPLGSHTDEMLWHVLERTFMRDTIMKLPEKLQAEVTENGENFSVGERQLLCMARALLRNSKIILLDEATASMDSKTDTLVQSTIKEAFKSCTVLTIAHR 1321          
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: MRP6_HUMAN (Multidrug resistance-associated protein 6 OS=Homo sapiens GN=ABCC6 PE=1 SV=2)

HSP 1 Score: 208.379 bits (529), Expect = 7.638e-53
Identity = 101/234 (43.16%), Postives = 151/234 (64.53%), Query Frame = 2
Query:   14 VENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715
            +EN +VSVER++ +   P EA W++      P WP  G ++  D  +RYR   PL ++G++  IH GEK+G+VGRTG+GKS+L     RL E +           + +GLH LRSR  IIPQ+P+LF G++R N+D + ++SDE IW +LE  QLK +VA+ P +L    AD G++ SVGQ+QLL L R +L+ +++L +DEATA+VD  T+ ++Q ++    A CT++ I HR
Sbjct: 1226 LENSIVSVERMQDYAWTPKEAPWRLPTCAAQPPWPQGGQIEFRDFGLRYRPELPLAVQGVSFKIHAGEKVGIVGRTGAGKSSLASGLLRLQEAAEGGIWIDGVPIAHVGLHTLRSRISIIPQDPILFPGSLRMNLDLLQEHSDEAIWAALETVQLKALVASLPGQLQYKCADRGEDLSVGQKQLLCLARALLRKTQILILDEATAAVDPGTELQMQAMLGSWFAQCTVLLIAHR 1459          
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: MRP9_RAT (Multidrug resistance-associated protein 9 OS=Rattus norvegicus GN=Abcc12 PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 9.976e-53
Identity = 94/204 (46.08%), Postives = 143/204 (70.10%), Query Frame = 2
Query:  104 PPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715
            P +WP+ G +   D ++RYR NTPLVL G+ L+I  G+ +G+VGRTGSGKS+L    FRLVEP+             +GL +LR++  +IPQ+PVLF GTVR N+DP+G ++DE +W  LER  ++D +   P+KL + V ++G+N+SVG+RQLL + R +L++S+++ +DEATAS+DS+TD  +Q  I++   +CT++ I HR
Sbjct: 1118 PKDWPSRGEITFKDYRMRYRDNTPLVLDGLNLNIQSGQTVGIVGRTGSGKSSLGMALFRLVEPASGTIFIDEVDICTVGLEELRTKLTMIPQDPVLFVGTVRYNLDPLGSHTDEMLWHVLERTFMRDTIMKLPEKLQAEVTENGENFSVGERQLLCMARALLRNSKIILLDEATASMDSKTDTLVQSTIKEAFKSCTVLTIAHR 1321          
The following BLAST results are available for this feature:
BLAST of DY305496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 469
Match NameE-valueIdentityDescription
MRP2_RABIT2.997e-5747.90Canalicular multispecific organic anion transporte... [more]
ABCC3_DICDI3.313e-5647.64ABC transporter C family member 3 OS=Dictyostelium... [more]
ABCC8_DICDI5.652e-5646.22ABC transporter C family member 8 OS=Dictyostelium... [more]
AB12C_ARATH5.652e-5646.35ABC transporter C family member 12 OS=Arabidopsis ... [more]
ABC2_SCHPO1.818e-5448.29ATP-binding cassette transporter abc2 OS=Schizosac... [more]
ABCCB_HUMAN2.374e-5445.76ATP-binding cassette transporter sub-family C memb... [more]
YCFI_YEAST2.625e-5346.44Metal resistance protein YCF1 OS=Saccharomyces cer... [more]
MRP9_MOUSE3.429e-5346.57Multidrug resistance-associated protein 9 OS=Mus m... [more]
MRP6_HUMAN7.638e-5343.16Multidrug resistance-associated protein 6 OS=Homo ... [more]
MRP9_RAT9.976e-5346.08Multidrug resistance-associated protein 9 OS=Rattu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1AG10RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305496 ID=DY305496; Name=DY305496; organism=Citrus sinensis; type=EST; length=1285bp
GATGAGTTGCTTTGTGGAAAACCGGATGGTCTCTGTTGAAAGGATAAAGC
AGTTTACAGAAATTCCTTCAGAAGCAGCATGGAAGATGGAAGATCGTCTT
CCACCTCCAAATTGGCCTGCTCATGGCAATGTGGACCTCATAGACTTGCA
GGTCAGATATCGCTCCAACACTCCTCTGGTTCTCAAAGGTATTACACTCA
GCATTCACGGGGGAGAGAAGATTGGTGTAGTTGGGCGTACAGGAAGTGGG
AAGTCAACTTTAATTCAAGTTTTCTTTAGGCTGGTGGAGCCTTCAGGAGG
GAGAATCATTATTGATGGAATCGACATTTCATTAATGGGGCTTCATGACC
TAAGGTCTCGCTTTGGGATCATTCCTCAAGAACCTGTCCTTTTTGAAGGA
ACTGTGAGAAGCAACATTGATCCAATTGGTCAGTATTCAGATGAAGAAAT
CTGGAAGAGCCTCGAGCGATGTCAACTTAAAGATGTGGTAGCTGCAAAGC
CTGATAAACTCGATTCTTTAGTGGCCGATAGTGGTGACAACTGGAGCGTG
GGACAAAGGCAGCTTCTTAGTCTGGGAAGGGTTATGCTAAAGCACAGCCG
GCTCTTGTTTATGGATGAGGCGACGGCTTCTGTTGATTCACAAACTGATG
CTGAAATTCAAAGGATCATTCGAAAAGAGTTAGCTGCCTGTACAATTATC
AACATTCCTCACAGGGATACCCACAGTCATGGATTGTGATAGAATTTATA
GTTGTTGAAGCAGGAAGGGCCAAAAAAATTTTACCNGCCGTCCCGGTGGT
TTGTGGGGCCTTCCTCCTTTGGGGCTTTTGTGGTGGCGGTCCCCGGCGGT
TTGGCGAAAGGGGGGGAACGAAGCCTTGTTGGTGGTTGTGGGTTGAGAGA
AGTTACCGGGAGTGAGGTCCAGGTGATTTAAGGAACAACCAGTGACGGGC
GAGAAAGAATAAAGTTGCCCGCCACCAAAATTGAGGGGTGGGGAGATGCC
TCTTGAAAATGGCCGCGGGAAGGATAAATGGAAGAGGGCGCGGGGCTTAG
AGCCAAGGTGAAGAGGATAATAGCACCGGCAAGACGGAACAAAAGAAGGT
TGTGTGGATGATGGGGGAAGGAATAGGAGAGNGCGGGGGGAGAAGGGGGG
GGGTGGCCCCCTCCCNCCCTCCCCTCCTCCCTCCTCCCCTTCTCTTCTTT
TTCTTTTTTCTTCTCTTTCCTTCTCTCTCTTTTTTTTCTTTATATAAATA
CAAATATTACTACAATAAATCTATATAATAATTAC
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