DY305496

Overview
NameDY305496
Unique NameDY305496
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1285
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: ABCC9_DICDI (ABC transporter C family member 9 OS=Dictyostelium discoideum GN=abcC9 PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 2.153e-47
Identity = 112/269 (41.64%), Postives = 156/269 (57.99%), Query Frame = 2
Query:   14 VENRMVSVERIKQFTEIPSEAAWK---------MEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGD-NWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR-----DTHSHGL**NL*LLKQEGPK 775
            +E +M S ER+  + ++PSE +            +D L   NWP  GN+   ++QV Y SN+   LK IT S+   EKIG+VGRTG+GKST+    FRLVE S             + L+ LR   GI+PQEP LF GT+RSNIDP+ QY DE IW  LE  +LK ++   P KL+S + ++G+   S GQ+QLL L R ++K+ +L+ MDEAT+SVD QT   I+ +I + L   TI+ I HR     D+    +  N  L++ E PK
Sbjct: 1058 LERKMNSFERVNNYIKLPSEGSGSGVKSMEFISEKDLL---NWPEKGNIQFNNVQVNYNSNSVPSLKDITFSVESNEKIGIVGRTGAGKSTIANCLFRLVECSKGSILIDGIDIKTIDLNKLRGSLGIVPQEPWLFSGTIRSNIDPLNQYDDEMIWNYLEMVKLKKLIIEMPLKLNSKIHENGNTTLSYGQKQLLCLCRCLIKNPKLIIMDEATSSVDFQTAETIKSVINENLVNNTILTIAHRLDIIIDSDKIAVIDNSKLIEFENPK 1323          
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: ABCCD_DICDI (ABC transporter C family member 13 OS=Dictyostelium discoideum GN=abcC13 PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 1.822e-46
Identity = 96/243 (39.51%), Postives = 150/243 (61.73%), Query Frame = 2
Query:   14 VENRMVSVERIKQFTEIPSEA-------AWKMEDRLPPPN--WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715
            +E +M SVERI+ +   P E          + E+ +   N  WP+ G ++  D+++RYR  +   LK ++  I+  + IG+VGRTG+GKST+    FR+VE S           S +GLHDLRS  GI+PQ+P +F GT+R NIDP  +Y+D EIW +LE+ +LK  +++ P KL++++ + GD  S GQ+QLL L R +LK+S+++ MDEAT+ +D  T   I++ + +    CT++ I HR
Sbjct: 1055 LEVKMNSVERIESYINTPKEGNRFTIDNEEEGEENMINLNEKWPSKGEIEFRDVEIRYRPTSEPSLKNLSFKINSNDHIGIVGRTGAGKSTVGISLFRMVECSKGSILIDGIDISKIGLHDLRSSLGIVPQDPFIFSGTIRLNIDPFNKYTDSEIWVALEKVKLKSTISSMPLKLETMIEEGGDGLSFGQKQLLCLSRTILKNSKVVLMDEATSGIDYVTGDLIKQTLLENFNDCTMLTIAHR 1297          
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: ABCC2_DICDI (ABC transporter C family member 2 OS=Dictyostelium discoideum GN=abcC2 PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 3.108e-46
Identity = 97/245 (39.59%), Postives = 151/245 (61.63%), Query Frame = 2
Query:   14 VENRMVSVERIKQFTEIPSEA---AWKMEDRLPPPN--------WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715
            +E +M SVER++ + + P E      + ED +            WP+ G V+  +++++YR      LK I+  I+  + IGVVGRTG+GKST+    FR+VE S           S +GLH+LR   GI+PQ+P +F G++R NIDP  +Y+D+EIW +LE+ +LKD +++ P KL+S V ++GD  S GQ+QLL L R +LK+S+++ MDEAT+ +D  T A +++ I +    CT++ I HR
Sbjct: 1087 LEVKMNSVERVESYIKTPREGIRHTSEFEDEIDIDGEIEMDFTKWPSRGEVEFKNVEIKYRPTADPSLKNISFKINAKDHIGVVGRTGAGKSTVGISLFRMVECSKGSIFIDGVDISKVGLHELRDALGIVPQDPFIFSGSIRMNIDPFNKYTDDEIWTALEKVKLKDAISSMPLKLESGVQENGDGLSFGQKQLLCLSRTILKNSKVVLMDEATSGIDYVTAALLKQTIDENFNDCTMLTIAHR 1331          
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: YBT1_YEAST (ATP-dependent bile acid permease OS=Saccharomyces cerevisiae GN=YBT1 PE=1 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 1.543e-45
Identity = 99/255 (38.82%), Postives = 145/255 (56.86%), Query Frame = 2
Query:   14 VENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERC------QLKDVVAAKPDK---------------LDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715
            VE  M SVER+K++ EI  E  +     +PPP WP  G +++ DL +RY  N P V+K ++ S+    KIG+VGRTG+GKST+I   FR +EP            S + L  LR    IIPQ+P LF GT+++N+DP  ++SD +I+++L+R       QL+     +                  L S +++ G N S GQRQL+ L R +L+  +++ +DEATAS+D  +DA+IQ  IRKE    TI+ I HR
Sbjct: 1343 VEMNMNSVERVKEYMEIEQEP-YNEHKEIPPPQWPQDGKIEVNDLSLRYAPNLPRVIKNVSFSVDAQSKIGIVGRTGAGKSTIITALFRFLEPETGHIKIDNIDISGVDLQRLRRSITIIPQDPTLFSGTIKTNLDPYDEFSDRQIFEALKRVNLISEEQLQQGATRETSNEASSTNSENVNKFLDLSSEISEGGSNLSQGQRQLMCLARSLLRSPKIILLDEATASIDYSSDAKIQETIRKEFQGSTILTIAHR 1596          
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: MRP7_MOUSE (Multidrug resistance-associated protein 7 OS=Mus musculus GN=Abcc10 PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 2.631e-45
Identity = 101/239 (42.26%), Postives = 145/239 (60.67%), Query Frame = 2
Query:   17 ENRMVSVERIKQFT-EIPSEAAWKMEDRLPPPN-----WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715
            E  MVSVER+++++ ++P E        L  P+     W   G+V+  D+ + YR   P  L G+T  +  GEK+G+VGRTGSGKS+L  V FRL+EP+           S + L +LRS+  +IPQEP LF GT+R N+DP G + D  +W++LE+C L +V  A    LD  + + G N S+GQRQLL L R +L  +++L +DEATASVD +TD  +Q+ I K  A  T++ I HR
Sbjct: 1214 EAMMVSVERLEEYSCDVPQEPH---SQPLQSPHQQRISWLTQGSVEFQDVVLVYRPGLPNALDGVTFRVEPGEKLGIVGRTGSGKSSLFLVLFRLLEPNAGRVLLDNVDTSQLELAELRSQLAVIPQEPFLFSGTIRENLDPQGLHEDRALWQALEQCHLSEVAVAM-GGLDGELGERGQNLSLGQRQLLCLARALLTDAKILCIDEATASVDQKTDQLLQQTICKRFANKTVLTIAHR 1448          
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: ABCC9_HUMAN (ATP-binding cassette transporter sub-family C member 9 OS=Homo sapiens GN=ABCC9 PE=1 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 4.488e-45
Identity = 95/235 (40.43%), Postives = 145/235 (61.70%), Query Frame = 2
Query:   14 VENRMVSVERIKQFTEIPSEA-AWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715
            +E +M +V+++  F  + SE     M+    P +WP  G + + DL VRY +N   VLK +   I  G+K+G+ GRTGSGKS+L   FFR+V+             S + LH LRSR  II Q+P+LF G++R N+DP  + +D+ +W++LE  QLK++V + P  LD++V + G+N+SVGQRQL  L R  ++ S +L MDEATAS+D  T+  +Q+++    A  T++ I HR
Sbjct: 1272 LEVQMGAVKKVNSFLTMESENYEGTMDPSQVPEHWPQEGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRSRLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRKSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHR 1506          
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: MRP7_HUMAN (Multidrug resistance-associated protein 7 OS=Homo sapiens GN=ABCC10 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 7.656e-45
Identity = 99/234 (42.31%), Postives = 144/234 (61.54%), Query Frame = 2
Query:   17 ENRMVSVERIKQFT-EIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715
            E  +VSVER++++T ++P E   + +       W   G V+  D+ + YR   P  L G+T  +  GEK+G+VGRTGSGKS+L+ V FRL+EPS           S + L  LRS+  IIPQEP LF GTVR N+DP G + D  +W++L++C L +V+ +    LD  + + G + S+GQRQLL L R +L  +++L +DEATASVD +TD  +Q+ I K  A  T++ I HR
Sbjct: 1209 EAMLVSVERLEEYTCDLPQEP--QGQPLQLGTGWLTQGGVEFQDVVLAYRPGLPNALDGVTFCVQPGEKLGIVGRTGSGKSSLLLVLFRLLEPSSGRVLLDGVDTSQLELAQLRSQLAIIPQEPFLFSGTVRENLDPQGLHKDRALWQALKQCHLSEVITSM-GGLDGELGEGGRSLSLGQRQLLCLARALLTDAKILCIDEATASVDQKTDQLLQQTICKRFANKTVLTIAHR 1439          
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: ABCC9_RAT (ATP-binding cassette transporter sub-family C member 9 OS=Rattus norvegicus GN=Abcc9 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 7.656e-45
Identity = 95/235 (40.43%), Postives = 144/235 (61.28%), Query Frame = 2
Query:   14 VENRMVSVERIKQFTEIPSEA-AWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715
            +E +M +V+++  F  + SE     M+    P +WP  G + + DL VRY +N   VLK +   I  G+K+G+ GRTGSGKS+L   FFR+V+             S + LH LRSR  II Q+P+LF G++R N+DP  + +D+ +W++LE  QLK++V + P  LD+ V + G+N+SVGQRQL  L R  ++ S +L MDEATAS+D  T+  +Q+++    A  T++ I HR
Sbjct: 1268 LEVQMGAVKKVNSFLTMESENYEGTMDPSQVPEHWPQEGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRSRLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDATVTEGGENFSVGQRQLFCLARAFVRKSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHR 1502          
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: ABCC9_MOUSE (ATP-binding cassette transporter sub-family C member 9 OS=Mus musculus GN=Abcc9 PE=1 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 7.656e-45
Identity = 95/235 (40.43%), Postives = 144/235 (61.28%), Query Frame = 2
Query:   14 VENRMVSVERIKQFTEIPSEA-AWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715
            +E +M +V+++  F  + SE     M+    P +WP  G + + DL VRY +N   VLK +   I  G+K+G+ GRTGSGKS+L   FFR+V+             S + LH LRSR  II Q+P+LF G++R N+DP  + +D+ +W++LE  QLK++V + P  LD+ V + G+N+SVGQRQL  L R  ++ S +L MDEATAS+D  T+  +Q+++    A  T++ I HR
Sbjct: 1269 LEVQMGAVKKVNSFLTMESENYEGTMDPSQVPEHWPQEGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRSRLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDATVTEGGENFSVGQRQLFCLARAFVRKSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHR 1503          
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: ABCCE_DICDI (ABC transporter C family member 14 OS=Dictyostelium discoideum GN=abcC14 PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 2.228e-44
Identity = 95/249 (38.15%), Postives = 149/249 (59.84%), Query Frame = 2
Query:   14 VENRMVSVERIKQFTEIPSEA--------------AWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDN-WSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715
            +E +M S +RI+ + EIP E                 K        NWP  G ++  +++++YR N+   LK ++  +   EKIG+VGRTG+GK+T+    FR+VE S           S + L  LRS  GI+PQ+P +F GT+RSNIDP  +++D EIW+S+E+ +LKD + + P KL++ + ++GDN +S GQ+QLL L R +LK+ +++ MDEAT+S+D  T   I++ I++    CT + I HR
Sbjct: 1018 LEVKMNSFQRIQSYIEIPKEGNKLISTGTNQVDSDGLKTISNGDLVNWPNKGIIEFKNVEIKYRPNSEPNLKDLSFKVQSSEKIGIVGRTGAGKTTIASSLFRMVECSKGLILIDGIDISKVQLQKLRSSIGIVPQDPFIFTGTIRSNIDPFNEFTDFEIWESIEKVKLKDAINSMPLKLETALQENGDNGFSYGQKQLLCLCRTILKNFKIILMDEATSSIDYHTAQLIKQTIQENFKDCTTLTIAHR 1266          
The following BLAST results are available for this feature:
BLAST of DY305496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 469
Match NameE-valueIdentityDescription
ABCC9_DICDI2.153e-4741.64ABC transporter C family member 9 OS=Dictyostelium... [more]
ABCCD_DICDI1.822e-4639.51ABC transporter C family member 13 OS=Dictyosteliu... [more]
ABCC2_DICDI3.108e-4639.59ABC transporter C family member 2 OS=Dictyostelium... [more]
YBT1_YEAST1.543e-4538.82ATP-dependent bile acid permease OS=Saccharomyces ... [more]
MRP7_MOUSE2.631e-4542.26Multidrug resistance-associated protein 7 OS=Mus m... [more]
ABCC9_HUMAN4.488e-4540.43ATP-binding cassette transporter sub-family C memb... [more]
MRP7_HUMAN7.656e-4542.31Multidrug resistance-associated protein 7 OS=Homo ... [more]
ABCC9_RAT7.656e-4540.43ATP-binding cassette transporter sub-family C memb... [more]
ABCC9_MOUSE7.656e-4540.43ATP-binding cassette transporter sub-family C memb... [more]
ABCCE_DICDI2.228e-4438.15ABC transporter C family member 14 OS=Dictyosteliu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1AG10RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305496 ID=DY305496; Name=DY305496; organism=Citrus sinensis; type=EST; length=1285bp
GATGAGTTGCTTTGTGGAAAACCGGATGGTCTCTGTTGAAAGGATAAAGC
AGTTTACAGAAATTCCTTCAGAAGCAGCATGGAAGATGGAAGATCGTCTT
CCACCTCCAAATTGGCCTGCTCATGGCAATGTGGACCTCATAGACTTGCA
GGTCAGATATCGCTCCAACACTCCTCTGGTTCTCAAAGGTATTACACTCA
GCATTCACGGGGGAGAGAAGATTGGTGTAGTTGGGCGTACAGGAAGTGGG
AAGTCAACTTTAATTCAAGTTTTCTTTAGGCTGGTGGAGCCTTCAGGAGG
GAGAATCATTATTGATGGAATCGACATTTCATTAATGGGGCTTCATGACC
TAAGGTCTCGCTTTGGGATCATTCCTCAAGAACCTGTCCTTTTTGAAGGA
ACTGTGAGAAGCAACATTGATCCAATTGGTCAGTATTCAGATGAAGAAAT
CTGGAAGAGCCTCGAGCGATGTCAACTTAAAGATGTGGTAGCTGCAAAGC
CTGATAAACTCGATTCTTTAGTGGCCGATAGTGGTGACAACTGGAGCGTG
GGACAAAGGCAGCTTCTTAGTCTGGGAAGGGTTATGCTAAAGCACAGCCG
GCTCTTGTTTATGGATGAGGCGACGGCTTCTGTTGATTCACAAACTGATG
CTGAAATTCAAAGGATCATTCGAAAAGAGTTAGCTGCCTGTACAATTATC
AACATTCCTCACAGGGATACCCACAGTCATGGATTGTGATAGAATTTATA
GTTGTTGAAGCAGGAAGGGCCAAAAAAATTTTACCNGCCGTCCCGGTGGT
TTGTGGGGCCTTCCTCCTTTGGGGCTTTTGTGGTGGCGGTCCCCGGCGGT
TTGGCGAAAGGGGGGGAACGAAGCCTTGTTGGTGGTTGTGGGTTGAGAGA
AGTTACCGGGAGTGAGGTCCAGGTGATTTAAGGAACAACCAGTGACGGGC
GAGAAAGAATAAAGTTGCCCGCCACCAAAATTGAGGGGTGGGGAGATGCC
TCTTGAAAATGGCCGCGGGAAGGATAAATGGAAGAGGGCGCGGGGCTTAG
AGCCAAGGTGAAGAGGATAATAGCACCGGCAAGACGGAACAAAAGAAGGT
TGTGTGGATGATGGGGGAAGGAATAGGAGAGNGCGGGGGGAGAAGGGGGG
GGGTGGCCCCCTCCCNCCCTCCCCTCCTCCCTCCTCCCCTTCTCTTCTTT
TTCTTTTTTCTTCTCTTTCCTTCTCTCTCTTTTTTTTCTTTATATAAATA
CAAATATTACTACAATAAATCTATATAATAATTAC
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