DY305496
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: NFT1_YEAST (ABC transporter NFT1 OS=Saccharomyces cerevisiae GN=NFT1 PE=1 SV=2) HSP 1 Score: 165.236 bits (417), Expect = 7.416e-40 Identity = 97/253 (38.34%), Postives = 142/253 (56.13%), Query Frame = 2 Query: 14 VENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSL------ERCQLKDVVAAKPD-------------KLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715 VE M SVERIK++T+IPSE+ + PP NWP G+V+L +L +RY ++ L ++ + G K+G+VGRTG+GKS++I +RL + + L LR+ IPQ+P LF+GTVRSN+DP +YSD +I+ L E C ++ + L+++V G N S GQRQLL L R ML ++ +DEATAS+D +DA+IQ+ IR+ + TI+ I HR Sbjct: 1249 VELLMSSVERIKEYTDIPSESNGYIS---PPANWPQTGDVELKNLSLRYSPHSSKALDNVSFKVKAGTKVGIVGRTGAGKSSIIAAIYRLSDWENGTITIDNKDIKHIPLERLRNSISCIPQDPTLFDGTVRSNLDPFDRYSDVQIYGVLSKVGLIEECDELCLIFEQEQPNFSSHKLRNRFIDLNTVVKSGGSNLSQGQRQLLCLARSMLGARNIMLIDEATASIDYISDAKIQKTIRETMKNTTILTIAHR 1498
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: VMR1_YEAST (ABC transporter ATP-binding protein/permease VMR1 OS=Saccharomyces cerevisiae GN=VMR1 PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 8.199e-39 Identity = 91/252 (36.11%), Postives = 145/252 (57.54%), Query Frame = 2 Query: 17 ENRMVSVERIKQFTEIPSEAAWKMEDR----LPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQL------KDVVAAKPD---------KLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715 E M SVER+K+++ I E ++ L P+WP G +++ +L +RY N P V++ ++ + KIG+VGRTG+GKST+I FRL+EP S + L LR IIPQ+P+LF GT++SN+DP +Y +++I+K+L + L ++V+ ++ L + +A+ G N S G+RQLL + R +L+ +++ +DEAT+S+D +D IQ IIR E TI+ I HR Sbjct: 1281 EMNMNSVERLKEYSSIEQENYLGHDEGRILLLNEPSWPKDGEIEIENLSLRYAPNLPPVIRNVSFKVDPQSKIGIVGRTGAGKSTIITALFRLLEPITGCIKIDGQDISKIDLVTLRRSITIIPQDPILFAGTIKSNVDPYDEYDEKKIFKALSQVNLISSHEFEEVLNSEERFNSTHNKFLNLHTEIAEGGLNLSQGERQLLFIARSLLREPKIILLDEATSSIDYDSDHLIQGIIRSEFNKSTILTIAHR 1532
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: CFTR_TRIVU (Cystic fibrosis transmembrane conductance regulator OS=Trichosurus vulpecula GN=CFTR PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 7.674e-37 Identity = 88/251 (35.06%), Postives = 135/251 (53.78%), Query Frame = 2 Query: 14 VENRMVSVERIKQFTEIPSEAAWKME-----------------DRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715 V++ M SV R+ +F ++PSE + + + NWP+ G + + DL +Y VL+ I+ SI G+++G++GRTGSGKSTL+ F RL+ S+ L R FG+IPQ+ +F GT R N+DP GQ+SD E+WK + LK V+ P KLD ++ D+G S G +QL+ L R +L +++L +DE +A +D T I+R ++ A CT+I HR Sbjct: 1152 VDSLMRSVSRVFKFIDMPSEEPLPPKPTKSKKNQLSQVLIIENEHVKKENWPSGGQMTVKDLTAKYIDGGNAVLENISFSISSGQRVGLLGRTGSGKSTLLAAFLRLLNTQGDIQIDGVSWDSVP-LQQWRKAFGVIPQKVFIFSGTFRKNLDPYGQWSDHELWKVADEVGLKSVIEQFPGKLDFVLVDAGCVLSHGHKQLICLARSVLSKAKILLLDEPSAHLDPITYQIIRRALKNAFADCTVILSEHR 1401
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: CFTR_LOXAF (Cystic fibrosis transmembrane conductance regulator OS=Loxodonta africana GN=CFTR PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 1.710e-36 Identity = 88/253 (34.78%), Postives = 136/253 (53.75%), Query Frame = 2 Query: 14 VENRMVSVERIKQFTEIPSEAAWKMEDRLPPP-------------------NWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715 V++ M SV RI +F ++P+E + + PP NWP+ G++ + DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ S+ L R FG+IPQ+ +F GT R N+DP Q SD+EIWK + L+ V+ P KLD ++ D G S G +QL+ L R +L +++L +DE +A +D T I+R +++ A CT+I HR Sbjct: 1154 VDSLMRSVSRIFKFIDMPTEESKPAKSVKPPKDGQLSKVMIIENQHVKKDYNWPSGGHMTVKDLTAKYIDGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLNTEGEIQIDGVSWDSIT-LQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQCSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGYVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQIIRRTLKQAFADCTVILCEHR 1405
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: CFTR_DASNO (Cystic fibrosis transmembrane conductance regulator OS=Dasypus novemcinctus GN=CFTR PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 2.233e-36 Identity = 88/253 (34.78%), Postives = 137/253 (54.15%), Query Frame = 2 Query: 14 VENRMVSVERIKQFTEIPSEAAWKMED-RLPPPN------------------WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715 V++ M SV R+ +F +IP+E + +LP WP+ G + + DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ S+ L + R FG+IPQ+ +F GT R N+DP GQ+SD+EIWK + L+ V+ P KLD ++ D G S G +QL+ L R +L +++L +DE +A +D T I+R +++ A CT+I HR Sbjct: 1154 VDSLMRSVSRVFKFVDIPTEENKPTKSIKLPKDGQLSKVMIIENQHVKKDDIWPSGGQMTVKDLTAKYIDGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLNTKGEIQIDGVSWDSIT-LQEWRKAFGVIPQKVFIFSGTFRKNLDPYGQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGYVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQIIRRTLKQAFADCTVILCEHR 1405
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: ABC4_SCHPO (ATP-binding cassette transporter abc4 OS=Schizosaccharomyces pombe GN=abc4 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 2.233e-36 Identity = 84/241 (34.85%), Postives = 133/241 (55.19%), Query Frame = 2 Query: 14 VENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDK-------LDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715 ++ M S ER+ +++++P E A + ++P WP G++ + V Y + P +LK + L I+ EK+ VVGRTGSGKSTL R + L+ LR R IPQ+P+LF GTVRSN+DP + D + ++L+ ++ A D LD+ VA G N+S GQ+Q+L+L R +++ S+++ +DE TASVD D +IQ+ +R+ T++ I HR Sbjct: 1174 LQAEMNSYERVLEYSKLPQEPAPTIAGQVPA-TWPKEGDIVFNHVSVSYSAAGPTILKDVNLHINPSEKVAVVGRTGSGKSTLGLTLLRFTHRISGEIYINGRETQSVNLNALRQRISFIPQDPILFSGTVRSNLDPFDELEDNFLNEALKTSGASSMIMAHTDDQKPIHITLDTHVASEGSNFSQGQKQVLALARAIVRRSKIIILDECTASVDDAMDQKIQKTLREAFGDATMLCIAHR 1413
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: CFTR_HORSE (Cystic fibrosis transmembrane conductance regulator OS=Equus caballus GN=CFTR PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 2.916e-36 Identity = 85/253 (33.60%), Postives = 137/253 (54.15%), Query Frame = 2 Query: 14 VENRMVSVERIKQFTEIPSEAAWKMEDRLPPPN-------------------WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715 V++ M SV R+ +F ++P+E + + P + WP+ G + + DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ S+ L R FG+IPQ+ +F GT R N+DP GQ++D+EIWK + L+ V+ P KLD ++ D G+ S G +QL+ L R +L +++L +DE +A +D T I+R +++ A CT+I HR Sbjct: 1153 VDSLMRSVSRVFKFIDMPTEDSKPTKSVKPSKDGQLSKVMIIENQYVKKDDIWPSGGQMTVKDLTAKYTDGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLNTEGEIQIDGVSWDSIT-LQQWRKAFGVIPQKVFIFSGTFRKNLDPYGQWNDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGNVLSHGHKQLICLARSVLSKAKILLLDEPSAHLDPITYQIIRRTLKQAFADCTVILSEHR 1404
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: CFTR_DIDMA (Cystic fibrosis transmembrane conductance regulator OS=Didelphis marsupialis virginiana GN=CFTR PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 8.484e-36 Identity = 88/253 (34.78%), Postives = 134/253 (52.96%), Query Frame = 2 Query: 14 VENRMVSVERIKQFTEIPSEAAW-------------------KMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715 V++ M SV R+ +F ++P+E + E NWP+ G + + DL +Y VL+ I+ SI G+++G++GRTGSGKSTL+ F RL+ S+ L R FG+IPQ+ +F GT R N+DP GQ+SD E+WK + LK V+ P KLD ++ D G S G +QL+ L R +L +++L +DE +A +D T I+R+++ A CT+I HR Sbjct: 1154 VDSLMRSVSRVFKFIDMPTEEPLPAKPTKSLKKNQLSQVLIIENEHVNKENNWPSGGQMIVKDLTAKYTDGGNAVLENISFSISPGQRVGLLGRTGSGKSTLLAAFLRLLNTEGEMQIDGVSWDSIP-LQKWRKAFGVIPQKVFIFSGTFRKNLDPYGQWSDHELWKVADEVGLKSVIEQFPGKLDFVLVDGGYVLSHGHKQLICLARSVLSKAKILLLDEPSAHLDPITYQIIRRVLKNAFANCTVILSEHR 1405
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: CFTR_PAPAN (Cystic fibrosis transmembrane conductance regulator OS=Papio anubis GN=CFTR PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 1.108e-35 Identity = 86/253 (33.99%), Postives = 133/253 (52.57%), Query Frame = 2 Query: 14 VENRMVSVERIKQFTEIPSEAAWKMEDRLPPPN-------------------WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715 V++ M SV R+ +F ++P+E P N WP+ G + + DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ S+ L R FG+IPQ+ +F GT R N+DP Q+SD+EIWK + L+ V+ P KLD ++ D G S G +QL+ L R +L +++L +DE +A +D T I+R +++ A CT+I HR Sbjct: 1153 VDSLMRSVSRVFKFIDMPTEEGKPTRSTKPYKNGQLSKVMVIENSHVKKDDIWPSGGQMTVKDLTAKYTEGGNPILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLNTEGEIQIDGVSWDSIT-LQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRTLKQAFADCTVILCEHR 1404
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: CFTR_MUSPF (Cystic fibrosis transmembrane conductance regulator OS=Mustela putorius furo GN=CFTR PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 1.108e-35 Identity = 85/254 (33.46%), Postives = 135/254 (53.15%), Query Frame = 2 Query: 14 VENRMVSVERIKQFTEIPSEAAWKMEDRLPPPN--------------------WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715 V++ M SV R+ +F ++P+E + P WP+ G + + DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ S+ L + R FG+IPQ+ +F GT R N+DP GQ++D+EIWK + L+ V+ P KLD ++ D G S G +QL+ L R +L +++L +DE +A +D T I+R +++ A CT+I HR Sbjct: 1155 VDSLMRSVSRVFKFIDMPAEESKPPTKSFKPSKDVQLSKVLITENHHVREDDIWPSGGQMTVKDLTAKYIDGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLNTEGEIQIDGVSWDSIT-LQEWRKAFGVIPQKVFIFSGTFRKNLDPYGQWNDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQIIRRTLKQAFADCTVILSEHR 1407 The following BLAST results are available for this feature:
BLAST of DY305496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 469
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305496 ID=DY305496; Name=DY305496; organism=Citrus sinensis; type=EST; length=1285bpback to top |