DY305496
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: CFTR_MUNMU (Cystic fibrosis transmembrane conductance regulator OS=Muntiacus muntjak GN=CFTR PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 2.469e-35 Identity = 86/253 (33.99%), Postives = 134/253 (52.96%), Query Frame = 2 Query: 14 VENRMVSVERIKQFTEIPSEAAWKMEDRLPPPN-------------------WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715 V++ M SV R+ +F ++P+E P + WP+ G + + DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ S+ L R FG+IPQ+ +F GT R N+DP GQ+SD+EIWK + L+ V+ P KLD ++ D G S G +QL+ L R +L +++L +DE +A +D T I+R +++ A CT+I HR Sbjct: 1153 VDSLMRSVSRVFKFIDMPTEDGKPNNSFRPSKDSQLSKVMIIENQHVKKDDIWPSGGQMTVKDLTAKYIDGGNAILENISFSISPGQRVGLLGRTGSGKSTLLLAFLRLLNTKGEIQIDGVSWDSIT-LQQWRKAFGVIPQKVFIFSGTFRKNLDPYGQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQIIRRTLKQAFADCTVILSEHR 1404
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: CFTR_CANFA (Cystic fibrosis transmembrane conductance regulator OS=Canis familiaris GN=CFTR PE=2 SV=2) HSP 1 Score: 150.214 bits (378), Expect = 2.469e-35 Identity = 85/254 (33.46%), Postives = 135/254 (53.15%), Query Frame = 2 Query: 14 VENRMVSVERIKQFTEIPSEAAWKMEDRLPPPN--------------------WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715 V++ M SV R+ +F ++P+E + P WP+ G + + DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ RLV S+ L + R FG+IPQ+ +F GT R N+DP GQ++D+EIWK + L+ V+ P KLD ++ D G S G +QL+ L R +L+ +++L +DE +A +D T I+R +++ A CT+I HR Sbjct: 1154 VDSLMRSVSRVFKFIDMPTEESKPPTKSFKPSKDAQLSKVTITENRHVREDDIWPSGGQMTVKDLTAKYIDGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSALLRLVNTEGEIQIDGVSWDSIP-LQEWRRAFGVIPQKVFIFSGTFRKNLDPYGQWNDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGYVLSHGHKQLMCLARSVLRKAKILLLDEPSAHLDPITYQIIRRTLKQAFADCTVILSEHR 1406
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: CFTR_CERAE (Cystic fibrosis transmembrane conductance regulator OS=Cercopithecus aethiops GN=CFTR PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 3.224e-35 Identity = 85/253 (33.60%), Postives = 133/253 (52.57%), Query Frame = 2 Query: 14 VENRMVSVERIKQFTEIPSEAAWKMEDRLPPPN-------------------WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715 V++ M SV R+ +F ++P+E P N WP+ G + + DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ S+ L R FG+IPQ+ +F GT R N+DP Q+SD+EIW+ + L+ V+ P KLD ++ D G S G +QL+ L R +L +++L +DE +A +D T I+R +++ A CT+I HR Sbjct: 1153 VDSLMRSVSRVFKFIDMPTEEGKPTRSTKPYKNGQLSKVMIIENSHVKKDDIWPSGGQMTVKDLTAKYTEGGNPILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLNTEGEIQIDGVSWDSIT-LQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQEIWEVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRTLKQAFADCTVILCEHR 1404
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: CFTR_RABIT (Cystic fibrosis transmembrane conductance regulator OS=Oryctolagus cuniculus GN=CFTR PE=2 SV=4) HSP 1 Score: 149.443 bits (376), Expect = 4.211e-35 Identity = 85/253 (33.60%), Postives = 134/253 (52.96%), Query Frame = 2 Query: 14 VENRMVSVERIKQFTEIPSEAAWKMEDRLPPPN-------------------WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715 V++ M SV R+ +F ++P+E + P N WP+ G + + L +Y + +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ S+ L R FG+IPQ+ +F GT R N+DP Q+SD+EIWK + L+ V+ P KLD ++ D G S G +QL+ L R +L +++L +DE +A +D T I+R +++ A CT+I HR Sbjct: 1153 VDSLMRSVSRVFKFIDMPTEETKSTKSIKPSSNCQLSKVMIIENQHVKKDDVWPSGGQMTVKGLTAKYIDSGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLNTEGEIQIDGVSWDSIT-LQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGYVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQIIRRTLKQAFADCTVILCEHR 1404
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: CFTR_ATEGE (Cystic fibrosis transmembrane conductance regulator OS=Ateles geoffroyi GN=CFTR PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 4.211e-35 Identity = 88/252 (34.92%), Postives = 138/252 (54.76%), Query Frame = 2 Query: 14 VENRMVSVERIKQFTEIPSEA-------AWK---------MEDRLPPPN--WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715 V++ M SV R+ +F ++P+E A+K +E+ N WP+ G + + DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ S+ L R FG+IPQ+ +F GT R N+DP Q+SD+EIWK + L+ V+ P KLD ++ D G S G +QL+ L R +L +++L +DE +A +D T I+R +++ A CT+I HR Sbjct: 1153 VDSLMRSVSRVFKFIDMPTEGKPTKSTKAYKNGQLSKVMIIENSHVKKNDIWPSGGQMTIKDLTAKYIEGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLNTEGEIQIDGVSWDSIT-LQQWRKAFGVIPQKVFIFTGTFRKNLDPYEQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRALKQAFADCTVILCEHR 1403
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: CFTR_PONAB (Cystic fibrosis transmembrane conductance regulator OS=Pongo abelii GN=CFTR PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 5.499e-35 Identity = 86/253 (33.99%), Postives = 134/253 (52.96%), Query Frame = 2 Query: 14 VENRMVSVERIKQFTEIPSEAAWKMEDRLPPPN-------------------WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715 V++ M SV R+ +F ++P+E + P N WP+ G + + DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ S+ L R FG+IPQ+ +F GT R N+DP Q+SD+EIWK + L+ V+ P KLD ++ D G S G +QL+ L R +L +++L +DE +A +D T I+R +++ A CT+I HR Sbjct: 1153 VDSLMRSVSRVFKFIDMPTEGK-PTKSTKPYKNGQLSKLMIIENSHVKKDDIWPSGGQMTVKDLTAKYTEGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLNTEGEIQIDGVSWDSIT-LQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRTLKQAFADCTVILCEHR 1403
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: CFTR_HUMAN (Cystic fibrosis transmembrane conductance regulator OS=Homo sapiens GN=CFTR PE=1 SV=3) HSP 1 Score: 149.058 bits (375), Expect = 5.499e-35 Identity = 86/253 (33.99%), Postives = 134/253 (52.96%), Query Frame = 2 Query: 14 VENRMVSVERIKQFTEIPSEAAWKMEDRLPPPN-------------------WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715 V++ M SV R+ +F ++P+E + P N WP+ G + + DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ S+ L R FG+IPQ+ +F GT R N+DP Q+SD+EIWK + L+ V+ P KLD ++ D G S G +QL+ L R +L +++L +DE +A +D T I+R +++ A CT+I HR Sbjct: 1153 VDSLMRSVSRVFKFIDMPTEGK-PTKSTKPYKNGQLSKVMIIENSHVKKDDIWPSGGQMTVKDLTAKYTEGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLNTEGEIQIDGVSWDSIT-LQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRTLKQAFADCTVILCEHR 1403
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: CFTR_SQUAC (Cystic fibrosis transmembrane conductance regulator OS=Squalus acanthias GN=CFTR PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 7.183e-35 Identity = 83/248 (33.47%), Postives = 136/248 (54.84%), Query Frame = 2 Query: 14 VENRMVSVERIKQFTEIPSEAAWK--------------MEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715 V+ M SV R+ ++ +IP E + +E++ WP+ G + + +L +Y S+ VL+ ++ S++ G+++G++GRTG+GKSTL+ RL+ S+ L R FG+IPQ+ +F GT R N+DP Q+SDEEIWK E LK ++ PDKL+ ++ D G S G +QL+ L R +L +++L +DE TA +D T I++ ++ + CT+I HR Sbjct: 1167 VDGLMRSVSRVFKYIDIPPEGSETKNRHNANNPSDVLVIENKHLTKEWPSGGQMMVNNLTAKYTSDGRAVLQDLSFSVNAGQRVGLLGRTGAGKSTLLSALLRLLSTEGEIQIDGISWNSV-SLQKWRKAFGVIPQKVFVFSGTFRKNLDPYEQWSDEEIWKVTEEVGLKSMIEQFPDKLNFVLVDGGYILSNGHKQLMCLARSILSKAKILLLDEPTAHLDPVTFQIIRKTLKHTFSNCTVILSEHR 1413 HSP 2 Score: 74.3294 bits (181), Expect = 1.722e-12 Identity = 47/160 (29.38%), Postives = 75/160 (46.88%), Query Frame = 2 Query: 179 VLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEI 658 VLK I+ + GE + + G TGSGKS+L+ + +EPS G R PQ P + GT++ NI Y + + CQL++ + P+K +++ D G S GQR +SL R + K + L +D + +D T+ +I Sbjct: 441 VLKNISFKLEKGELLAIAGSTGSGKSSLLMMIMGELEPSD-------------GKIKHSGRISYSPQVPWIMPGTIKDNIIFGLSYDEYRYTSVVNACQLEEDITVFPNKDKTVLGDGGITLSGGQRARISLARALYKDADLYLLDSPFSHLDVTTEKDI 587
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: CFTR_SAIBB (Cystic fibrosis transmembrane conductance regulator OS=Saimiri boliviensis boliviensis GN=CFTR PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 7.183e-35 Identity = 85/253 (33.60%), Postives = 133/253 (52.57%), Query Frame = 2 Query: 14 VENRMVSVERIKQFTEIPSEAAWKMEDRLPPPN-------------------WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715 V++ M SV R+ +F ++P+E + N WP+ G + + DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ S+ L R FG+IPQ+ +F GT R N+DP Q+SD+EIWK + L+ V+ P KLD ++ D G S G +QL+ L R +L +++L +DE +A +D T I+R +++ A CT+I HR Sbjct: 1153 VDSLMRSVSRVFKFIDMPTEEGKPTKSTKAYKNGQLSKVMIIENSHVKKDDIWPSGGQMTIKDLTAKYVEGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLNTEGEIQIDGVSWDSIT-LQQWRKAFGVIPQKVFIFTGTFRKNLDPYEQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRALKQAFADCTVILCEHR 1404
BLAST of DY305496 vs. ExPASy Swiss-Prot
Match: CFTR_ORNAN (Cystic fibrosis transmembrane conductance regulator OS=Ornithorhynchus anatinus GN=CFTR PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 9.381e-35 Identity = 85/255 (33.33%), Postives = 135/255 (52.94%), Query Frame = 2 Query: 14 VENRMVSVERIKQFTEIPSEAAWKMEDRLPPP---------------------NWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXSLMGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLSLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRKELAACTIINIPHR 715 V++ M SV R+ +F ++P+E E R P NWP+ G + + DL +Y P +L I+ SI G+++G++GRTGSGKSTL+ F RL+ ++ + R FG+IPQ+ +F G+ R N+DP GQ++D+E+WK E LK V+ P +LD ++ D G S G RQL+ L R +L +++L +DE +A +D T I++ +++ CT+I HR Sbjct: 1157 VDSLMRSVSRVFKFIDMPTE-----EHRPTHPAKNKDISGVLIIENQHVKREKNWPSGGQMTVQDLTAKYLDGGPAILDNISFSISSGQRVGLLGRTGSGKSTLLFAFLRLLNTEGDIRIDGISWDAVP-VQQWRKAFGVIPQKVFIFSGSFRKNLDPYGQWTDQELWKVAEEVGLKSVIEQFPGQLDFVLIDGGYVLSHGHRQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAFTNCTVILSEHR 1405 The following BLAST results are available for this feature:
BLAST of DY305496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 469
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY305496 ID=DY305496; Name=DY305496; organism=Citrus sinensis; type=EST; length=1285bpback to top |