DY305495

Overview
NameDY305495
Unique NameDY305495
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1267
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305495 vs. ExPASy Swiss-Prot
Match: Y1518_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 3.484e-34
Identity = 75/154 (48.70%), Postives = 104/154 (67.53%), Query Frame = 3
Query:  333 SGQGLPEFQTEITVLSKIRHRHLVSLIGYCDERYEMILVYDFMEKGTLRDHLY-KSKSPCLSWIQRLEICIGAARGLHYLHKGSTGRIIHRDVKPTNILLDKNHVAKVADFGLSRLGTRD-ENHISTAVKKTFGYLDPKYFRSQQ*TEKSDGYS 788
            S QG  EF+ E+ +L ++ HRHLV L+GYCD+   + L+Y++M  G LR+++  K     L+W  R++I + AA+GL YLH G    ++HRDVK TNILL++   AK+ADFGLSR    D E H+ST V  T GYLDP+Y+R+   +EKSD YS
Sbjct:  617 SAQGYKEFKAEVELLLRVHHRHLVGLVGYCDDGDNLALIYEYMANGDLRENMSGKRGGNVLTWENRMQIAVEAAQGLEYLHNGCRPPMVHRDVKTTNILLNERCGAKLADFGLSRSFPIDGECHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYS 770          
BLAST of DY305495 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 3.484e-34
Identity = 74/154 (48.05%), Postives = 103/154 (66.88%), Query Frame = 3
Query:  333 SGQGLPEFQTEITVLSKIRHRHLVSLIGYCDERYEMILVYDFMEKGTLRDHLY-KSKSPCLSWIQRLEICIGAARGLHYLHKGSTGRIIHRDVKPTNILLDKNHVAKVADFGLSR-LGTRDENHISTAVKKTFGYLDPKYFRSQQ*TEKSDGYS 788
            S QG  EF+ E+ +L ++ H++LV L+GYCDE   + L+Y++M  G LR+H+  K     L+W  RL+I + +A+GL YLH G    ++HRDVK TNILL+++  AK+ADFGLSR      E H+ST V  T GYLDP+Y+R+    EKSD YS
Sbjct:  626 SSQGYKEFKAEVELLLRVHHKNLVGLVGYCDEGENLALIYEYMANGDLREHMSGKRGGSILNWETRLKIVVESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHLHAKLADFGLSRSFPIEGETHVSTVVAGTPGYLDPEYYRTNWLNEKSDVYS 779          
BLAST of DY305495 vs. ExPASy Swiss-Prot
Match: Y2289_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 5.942e-34
Identity = 77/155 (49.68%), Postives = 103/155 (66.45%), Query Frame = 3
Query:  333 SGQGLPEFQTEITVLSKIRHRHLVSLIGYCDERYEMILVYDFMEKGTLRDHLYKSK--SPCLSWIQRLEICIGAARGLHYLHKGSTGRIIHRDVKPTNILLDKNHVAKVADFGLSR-LGTRDENHISTAVKKTFGYLDPKYFRSQQ*TEKSDGYS 788
            S QG  EF+ E+ +L ++ H +LVSL+GYCDE   + L+Y++   G L+ HL   +  SP L W  RL+I +  A+GL YLH G    ++HRDVK TNILLD++  AK+ADFGLSR      E H+STAV  T GYLDP+Y+R+ +  EKSD YS
Sbjct:  607 SVQGYKEFKAEVELLLRVHHVNLVSLVGYCDEESNLALLYEYAPNGDLKQHLSGERGGSP-LKWSSRLKIVVETAQGLEYLHTGCKPPMVHRDVKTTNILLDEHFQAKLADFGLSRSFPVGGETHVSTAVAGTPGYLDPEYYRTNRLNEKSDVYS 760          
BLAST of DY305495 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 7.762e-34
Identity = 74/155 (47.74%), Postives = 101/155 (65.16%), Query Frame = 3
Query:  333 SGQGLPEFQTEITVLSKIRHRHLVSLIGYCDERYEMILVYDFMEKGTLRDHLYKSKSPCLS---WIQRLEICIGAARGLHYLHKGSTGRIIHRDVKPTNILLDKNHVAKVADFGLSRLGTRDENHISTAVKKTFGYLDPKYFRSQQ*TEKSDGYS 788
            +G+G  EF++EI VL+K+RHRHLV+L+GYC +  E +LVY++M +GTL  HL++     L    W QRL + +  ARG+ YLH  +    IHRD+KP+NILL  +  AKVADFGL RL    +  I T +  TFGYL P+Y  + + T K D YS
Sbjct:  624 AGKGFAEFKSEIAVLTKVRHRHLVTLLGYCLDGNEKLLVYEYMPQGTLSRHLFEWSEEGLKPLLWKQRLTLALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVYS 778          

HSP 2 Score: 23.8682 bits (50), Expect = 7.762e-34
Identity = 10/16 (62.50%), Postives = 12/16 (75.00%), Query Frame = 2
Query:  266 GNVYKGTLRNGMKVAV 313
            G VYKG L +G K+AV
Sbjct:  600 GVVYKGELHDGTKIAV 615          

HSP 3 Score: 21.9422 bits (45), Expect = 7.762e-34
Identity = 16/52 (30.77%), Postives = 24/52 (46.15%), Query Frame = 1
Query:  118 GGNSHGKVPEGTG--GSPMPNVNLG-LKIPLVEIQFATHNFDRKFVIGKGGF 264
            GG S      GT   G  +  V  G + I +  ++  T+NF    ++G GGF
Sbjct:  548 GGISDTYTLPGTSEVGDNIQMVEAGNMLISIQVLRSVTNNFSSDNILGSGGF 599          
BLAST of DY305495 vs. ExPASy Swiss-Prot
Match: ACR4_ARATH (Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 7.771e-34
Identity = 72/150 (48.00%), Postives = 103/150 (68.67%), Query Frame = 3
Query:  351 EFQTEITVLSKIRHRHLVSLIGYCDERYEMILVYDFMEKGTLRDHLY---KSKSPCLSWIQRLEICIGAARGLHYLHKGSTGRIIHRDVKPTNILLDKNHVAKVADFGLSRLGTRDE-NHISTAVKKTFGYLDPKYFRSQQ*TEKSDGYS 788
            EF+TE+ +LS++ H HL+SL+GYC+E  E +LVY+FM  G+L +HL+   K+    L W++R+ I + AARG+ YLH  +   +IHRD+K +NIL+D+ H A+VADFGLS LG  D  + ++     T GYLDP+Y+R    T KSD YS
Sbjct:  554 EFRTELDLLSRLNHAHLLSLLGYCEECGERLLVYEFMAHGSLHNHLHGKNKALKEQLDWVKRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPVDSGSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYS 703          

HSP 2 Score: 23.0978 bits (48), Expect = 7.771e-34
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 2
Query:  272 VYKGTLRNGMKVAV 313
            VYKG LR+G  VAV
Sbjct:  526 VYKGVLRDGTTVAV 539          

HSP 3 Score: 20.7866 bits (42), Expect = 7.771e-34
Identity = 7/20 (35.00%), Postives = 12/20 (60.00%), Query Frame = 1
Query:  205 EIQFATHNFDRKFVIGKGGF 264
            E++ A   F  + ++GKG F
Sbjct:  504 ELEKAADGFKEESIVGKGSF 523          
BLAST of DY305495 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 1.014e-33
Identity = 76/156 (48.72%), Postives = 103/156 (66.03%), Query Frame = 3
Query:  333 SGQGLPEFQTEITVLSKIRHRHLVSLIGYCDERYEMILVYDFMEKGTLRDHLY-KSKSPCLSWIQRLEICIGAARGLHYLHKGSTGRIIHRDVKPTNILLDKNHVAKVADFGLSR---LGTRDENHISTAVKKTFGYLDPKYFRSQQ*TEKSDGYS 788
            S QG  EF+ E+ +L ++ H +LV+L+GYCDE+    L+Y++M  G L  HL  K     L+W  RL+I I AA GL YLH G    ++HRDVK TNILLD+   AK+ADFGLSR   +G  D++ +ST V  T GYLDP+Y+ + + +EKSD YS
Sbjct:  600 SAQGYKEFKAEVELLLRVHHINLVNLVGYCDEQDHFALIYEYMSNGDLHQHLSGKHGGSVLNWGTRLQIAIEAALGLEYLHTGCKPAMVHRDVKSTNILLDEEFKAKIADFGLSRSFQVG-GDQSQVSTVVAGTLGYLDPEYYLTSELSEKSDVYS 754          
BLAST of DY305495 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 1.324e-33
Identity = 72/154 (46.75%), Postives = 103/154 (66.88%), Query Frame = 3
Query:  333 SGQGLPEFQTEITVLSKIRHRHLVSLIGYCDERYEMILVYDFMEKGTLRDHLY-KSKSPCLSWIQRLEICIGAARGLHYLHKGSTGRIIHRDVKPTNILLDKNHVAKVADFGLSR-LGTRDENHISTAVKKTFGYLDPKYFRSQQ*TEKSDGYS 788
            S QG  +F+ E+ +L ++ H++LV L+GYC+E  ++ L+Y++M  G L +H+  K     L+W  RL+I + AA+GL YLH G    ++HRDVK TNILL+++   K+ADFGLSR      E H+ST V  T GYLDP+Y+R+   TEKSD YS
Sbjct:  611 SAQGYKQFKAEVELLLRVHHKNLVGLVGYCEEGDKLALIYEYMANGDLDEHMSGKRGGSILNWGTRLKIALEAAQGLEYLHNGCKPLMVHRDVKTTNILLNEHFDTKLADFGLSRSFPIEGETHVSTVVAGTIGYLDPEYYRTNWLTEKSDVYS 764          
BLAST of DY305495 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.729e-33
Identity = 73/154 (47.40%), Postives = 105/154 (68.18%), Query Frame = 3
Query:  333 SGQGLPEFQTEITVLSKIRHRHLVSLIGYCDERYEMILVYDFMEKGTLRDHLYKSKSP-CLSWIQRLEICIGAARGLHYLHKGSTGRIIHRDVKPTNILLDKNHVAKVADFGLSR-LGTRDENHISTAVKKTFGYLDPKYFRSQQ*TEKSDGYS 788
            S QG  +F+ E+ +L ++ H++LV L+GYCDE   + L+Y++M  G L++H+  +++   L+W  RL+I I +A+GL YLH G    ++HRDVK TNILL+++  AK+ADFGLSR      E H+ST V  T GYLDP+Y R+   TEKSD YS
Sbjct:  612 SSQGYKQFKAEVELLLRVHHKNLVGLVGYCDEGDNLALIYEYMANGDLKEHMSGTRNRFILNWGTRLKIVIESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHFEAKLADFGLSRSFLIEGETHVSTVVAGTPGYLDPEYHRTNWLTEKSDVYS 765          
BLAST of DY305495 vs. ExPASy Swiss-Prot
Match: Y4291_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g29180 OS=Arabidopsis thaliana GN=At4g29180 PE=2 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 1.729e-33
Identity = 73/153 (47.71%), Postives = 100/153 (65.36%), Query Frame = 3
Query:  333 SGQGLPEFQTEITVLSKIRHRHLVSLIGYCDERYEMILVYDFMEKGTLRDHLYKSKSPCLSWIQRLEICIGAARGLHYLHKGSTGRIIHRDVKPTNILLDKNHVAKVADFGLSRLGTRDE-NHISTAVKKTFGYLDPKYFRSQQ*TEKSDGYS 788
            S Q   EFQ E  +L  + HR+L S +GYCD+   M L+Y++M  G L+D+L    +  LSW +RL I I +A+GL YLH G    I+HRDVK  NILL+ N  AK+ADFGLS++   D+ +H+ TAV  T GY+DP+Y+ + +  EKSD YS
Sbjct:  614 SSQVSKEFQVEAELLLTVHHRNLASFVGYCDDGRSMALIYEYMANGNLQDYLSSENAEDLSWEKRLHIAIDSAQGLEYLHHGCRPPIVHRDVKTANILLNDNLEAKIADFGLSKVFPEDDLSHVVTAVMGTPGYVDPEYYNTFKLNEKSDVYS 766          
BLAST of DY305495 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.729e-33
Identity = 75/155 (48.39%), Postives = 101/155 (65.16%), Query Frame = 3
Query:  333 SGQGLPEFQTEITVLSKIRHRHLVSLIGYCDERYEMILVYDFMEKGTLRDHLY--KSKSPCLSWIQRLEICIGAARGLHYLHKGSTGRIIHRDVKPTNILLDKNHVAKVADFGLSR-LGTRDENHISTAVKKTFGYLDPKYFRSQQ*TEKSDGYS 788
            S QG  +F+ E+ +L ++ H +LV+L+GYCDE   ++L+Y++M  G L+ HL    S+SP LSW  RL I    A+GL YLH G    +IHRD+K  NILLD N  AK+ DFGLSR      E H+ST V  + GYLDP+Y+R+   TEKSD +S
Sbjct:  625 SAQGYKQFKAEVDLLLRVHHINLVTLVGYCDEGQHLVLIYEYMSNGNLKQHLSGENSRSP-LSWENRLRIAAETAQGLEYLHIGCKPPMIHRDIKSMNILLDNNFQAKLGDFGLSRSFPVGSETHVSTNVAGSPGYLDPEYYRTNWLTEKSDVFS 778          
The following BLAST results are available for this feature:
BLAST of DY305495 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 335
Match NameE-valueIdentityDescription
Y1518_ARATH3.484e-3448.70Probable LRR receptor-like serine/threonine-protei... [more]
RLK6_ARATH3.484e-3448.05Receptor-like protein kinase At3g21340 OS=Arabidop... [more]
Y2289_ARATH5.942e-3449.68Probable LRR receptor-like serine/threonine-protei... [more]
TMK1_ARATH7.762e-3447.74Probable receptor protein kinase TMK1 OS=Arabidops... [more]
ACR4_ARATH7.771e-3448.00Serine/threonine-protein kinase-like protein ACR4 ... [more]
MEE39_ARATH1.014e-3348.72Probable LRR receptor-like serine/threonine-protei... [more]
Y5181_ARATH1.324e-3346.75Probable LRR receptor-like serine/threonine-protei... [more]
Y5182_ARATH1.729e-3347.40Probable LRR receptor-like serine/threonine-protei... [more]
Y4291_ARATH1.729e-3347.71Probable LRR receptor-like serine/threonine-protei... [more]
Y4245_ARATH1.729e-3348.39Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1AG09RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305495 ID=DY305495; Name=DY305495; organism=Citrus sinensis; type=EST; length=1267bp
GGTTTGCTTCTGATTTGCATATTGGCAGTTGTACTGTTTTTTGTTTTGAC
ATACAGAAAGCAAAAGCCTGGTGAATTTCCTTTGGCTTTGGATTGGTCTC
CATTACATGTACGTGGAGGAGGGAATTCTCATGGTAAGGTCCCTGAGGGA
ACTGGCGGCTCCCCAATGCCTAATGTAAACCTTGGATTAAAAATTCCTTT
GGTAGAAATTCAGTTTGCGACGCACAATTTTGATAGAAAGTTTGTGATCG
GCAAGGGAGGATTTAGGGAATGTCTACAAAGGAACTCTCAGGAACGGCAT
GAAAGTTGCTGTTATAGCNAANCNAACCANGCTCCGGCCAAGGCCTTCCA
GAATTCCAAACTGAAATAACAGTCTTATCAAAAATTCGCCACCGCCATCT
TGTTTCCTTAATTGGATATTGTGATGAACGGTATGAGATGATACTAGTGT
ATGATTTCATGGAAAAAGGGACTTTGAGGGATCACCTATACAAGTCAAAG
TCACCCTGTTTGTCCTGGATACAAAGGCTTGAAATATGCATTGGTGCAGC
AAGAGGTCTTCATTATCTACACAAAGGTTCAACTGGCAGAATCATTCACC
GTGATGTGAAGCCCACAAACATTTTGCTGGACAAAAATCATGTTGCCAAA
GTTGCTGATTTTGGCCTTTCAAGATTGGGTACGCGTGATGAAAACCACAT
CAGCACAGCTGTTAAAAAGACGTTTGGTTATCTTGATCCTAAGTACTTCC
GGTCACAACAATAAACAGAAAAATCTGATGGTTACTCCATTCGTAGTTGT
TCTTTTAAAGGTTGAATGTGCAAGAACAGCCCTCAATGCCTCACTCCCAA
AAAAGCAAGTGAACCTGGCTTAATGGGGCATGCGTTTGCAGGAAAAAAGG
GCTTCCTTAAGAAATCTTAGATTCTTTTATAAAAGGGTCAAATCATTCCA
AACCCATTGAAGAAATTTTCCTAAAAAACTGAAAAAATTTTTGCGGGAAG
ATGGTGCAGAAAAACCCAAAAAGGGGGAATATATAGTGGGGGGTTAGGAG
AATCGTTTTTCCCCTTCCAAAAAAGGAGATAATATAGGAAACCCCCGGNA
AGGCCCCNCCCCCCCNCCCCCCCCCCCTTTAGTTTTTCTTTCTCCCTATT
ATGAGATAGTGTTTTCTCCTTTCTTATTAAGGGGTGTCTTGGATAGAAAA
AAGAATTTAAAATTGATCCTTTTTAGTTTGTGAAACACCGGAGCAAGAAA
AAAAAACTATAACTACC
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