DY305489

Overview
NameDY305489
Unique NameDY305489
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1271
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305489 vs. ExPASy Swiss-Prot
Match: CLPC_STAS1 (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=clpC PE=3 SV=1)

HSP 1 Score: 374.785 bits (961), Expect = 6.062e-103
Identity = 192/355 (54.08%), Postives = 257/355 (72.39%), Query Frame = 2
Query:    2 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTGFQLIGSPPGYVGYTEGGQLTEAVPRPPFTVVPFDEIERLIPMSFT*SFKFPRKENWTNARGKLENSKILF*KMDPKVGKQ 1066
            TTLDEYRK+IEKD ALERRFQPV+V EP+V++TI+ILKGLR+RYE HH++  +DEALVSAA+LS++Y+SDRFLPDKAIDLIDEA S+VRL+    P   +E+E+++ Q+  EK+ AV  Q+FE A  LRD++  L+ Q        K      T+ GD    ++E DI  +++ WTGIP+ K++  ESDRLL +E+TLH RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA   FG ++AMIR+DMSEFME+H   +L+G+PPGYVG+ +GGQLTE V R P++V+ FDEIE+  P  F    +     + T+ +G+  + +     M   VG Q
Sbjct:  315 TTLDEYRKNIEKDAALERRFQPVQVDEPTVEDTIEILKGLRDRYEAHHRINISDEALVSAAKLSHRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPPNLKEIEQQIEQVKNEKDAAVHAQEFENAANLRDKQTKLEKQYEEANTNWKN-----TQNGD-NTSLSEEDIGEVIAGWTGIPLTKINETESDRLLNLEDTLHNRVIGQKDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRRVDFRNTVIIMTSNVGAQ 663          
BLAST of DY305489 vs. ExPASy Swiss-Prot
Match: CLPC_MYCLE (Probable ATP-dependent Clp protease ATP-binding subunit OS=Mycobacterium leprae GN=clpC PE=3 SV=2)

HSP 1 Score: 361.688 bits (927), Expect = 2.645e-102
Identity = 183/316 (57.91%), Postives = 240/316 (75.95%), Query Frame = 2
Query:    2 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTGFQLIGSPPGYVGYTEGGQLTEAVPRPPFTVVPFDEIER 940
            TTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++  TD A+V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R    P + RE ++++ +  +EK  A+  QDFEKA  LRDRE  L AQ        +   + +  +GD+  V+ EVD   I  ++  WTGIPV K++  E+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP  SFIF+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T  +L G+PPGYVGY EGGQLTE V R PF+VV FDEIE+
Sbjct:  323 TTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDSAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIAEARREKESAIDAQDFEKAASLRDREKQLVAQ--------RAEREKQWRSGDLD-VIAEVDDEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEK 629          

HSP 2 Score: 32.7278 bits (73), Expect = 2.645e-102
Identity = 13/34 (38.24%), Postives = 24/34 (70.59%), Query Frame = 1
Query:  937 KAHPDVLHMKLQISEEGKLDERKGKTGKLQNTLL 1038
            KAH ++ +  LQ+ E+G+L + +G+T   +NT+L
Sbjct:  629 KAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVL 662          
BLAST of DY305489 vs. ExPASy Swiss-Prot
Match: CLPC_STAES (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus epidermidis (strain ATCC 12228) GN=clpC PE=3 SV=1)

HSP 1 Score: 372.474 bits (955), Expect = 3.009e-102
Identity = 189/355 (53.24%), Postives = 258/355 (72.68%), Query Frame = 2
Query:    2 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTGFQLIGSPPGYVGYTEGGQLTEAVPRPPFTVVPFDEIERLIPMSFT*SFKFPRKENWTNARGKLENSKILF*KMDPKVGKQ 1066
            TTLDEYRK+IEKD ALERRFQP++V EP+V++TI+ILKGLR+RYE HH++  +DEAL +AA+LS +Y+SDRFLPDKAIDLIDEA S+VRL+    P   +E+E+E+ ++  EK+ AV  Q+FE A  LRD++  L+ Q     D   E   A+   G +   ++E +I  +++ WTGIP+ K++  ESDRLL +E+TLHKRVIGQ++AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA   FG ++AMIR+DMSEFME+H   +L+G+PPGYVG+ +GGQLTE V R P++V+ FDEIE+  P  F    +     + T+ +G+  + +     M   VG Q
Sbjct:  315 TTLDEYRKNIEKDAALERRFQPIQVDEPTVEDTIEILKGLRDRYEAHHRINISDEALEAAAKLSDRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPSNLKEIEQEIDKVKNEKDAAVHAQEFENAANLRDKQSKLEKQYE---DAKNEWKNAQ---GGLDTALSEENIAEVIAGWTGIPLTKINETESDRLLNLEDTLHKRVIGQNDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTVIIMTSNVGAQ 663          
BLAST of DY305489 vs. ExPASy Swiss-Prot
Match: CLPC_STAEQ (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=clpC PE=3 SV=1)

HSP 1 Score: 372.474 bits (955), Expect = 3.009e-102
Identity = 189/355 (53.24%), Postives = 258/355 (72.68%), Query Frame = 2
Query:    2 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTGFQLIGSPPGYVGYTEGGQLTEAVPRPPFTVVPFDEIERLIPMSFT*SFKFPRKENWTNARGKLENSKILF*KMDPKVGKQ 1066
            TTLDEYRK+IEKD ALERRFQP++V EP+V++TI+ILKGLR+RYE HH++  +DEAL +AA+LS +Y+SDRFLPDKAIDLIDEA S+VRL+    P   +E+E+E+ ++  EK+ AV  Q+FE A  LRD++  L+ Q     D   E   A+   G +   ++E +I  +++ WTGIP+ K++  ESDRLL +E+TLHKRVIGQ++AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA   FG ++AMIR+DMSEFME+H   +L+G+PPGYVG+ +GGQLTE V R P++V+ FDEIE+  P  F    +     + T+ +G+  + +     M   VG Q
Sbjct:  315 TTLDEYRKNIEKDAALERRFQPIQVDEPTVEDTIEILKGLRDRYEAHHRINISDEALEAAAKLSDRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPSNLKEIEQEIDKVKNEKDAAVHAQEFENAANLRDKQSKLEKQYE---DAKNEWKNAQ---GGLDTALSEENIAEVIAGWTGIPLTKINETESDRLLNLEDTLHKRVIGQNDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTVIIMTSNVGAQ 663          
BLAST of DY305489 vs. ExPASy Swiss-Prot
Match: CLPC_MYCTU (Probable ATP-dependent Clp protease ATP-binding subunit OS=Mycobacterium tuberculosis GN=clpC PE=1 SV=1)

HSP 1 Score: 361.303 bits (926), Expect = 3.451e-102
Identity = 184/316 (58.23%), Postives = 240/316 (75.95%), Query Frame = 2
Query:    2 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTGFQLIGSPPGYVGYTEGGQLTEAVPRPPFTVVPFDEIER 940
            TTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++  TD A+V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R    P + RE ++++ +  +EK  A+  QDFEKA  LRDRE  L AQ        +   + +  +GD+  VV EVD   I  ++  WTGIPV K++  E+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP  SFIF+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T  +L G+PPGYVGY EGGQLTE V R PF+VV FDEIE+
Sbjct:  323 TTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQ--------RAEREKQWRSGDLD-VVAEVDDEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEK 629          

HSP 2 Score: 32.7278 bits (73), Expect = 3.451e-102
Identity = 13/34 (38.24%), Postives = 24/34 (70.59%), Query Frame = 1
Query:  937 KAHPDVLHMKLQISEEGKLDERKGKTGKLQNTLL 1038
            KAH ++ +  LQ+ E+G+L + +G+T   +NT+L
Sbjct:  629 KAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVL 662          
BLAST of DY305489 vs. ExPASy Swiss-Prot
Match: CLPC_MYCBO (Probable ATP-dependent Clp protease ATP-binding subunit OS=Mycobacterium bovis GN=clpC PE=3 SV=1)

HSP 1 Score: 361.303 bits (926), Expect = 3.451e-102
Identity = 184/316 (58.23%), Postives = 240/316 (75.95%), Query Frame = 2
Query:    2 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTGFQLIGSPPGYVGYTEGGQLTEAVPRPPFTVVPFDEIER 940
            TTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++  TD A+V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R    P + RE ++++ +  +EK  A+  QDFEKA  LRDRE  L AQ        +   + +  +GD+  VV EVD   I  ++  WTGIPV K++  E+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP  SFIF+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T  +L G+PPGYVGY EGGQLTE V R PF+VV FDEIE+
Sbjct:  323 TTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQ--------RAEREKQWRSGDLD-VVAEVDDEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEK 629          

HSP 2 Score: 32.7278 bits (73), Expect = 3.451e-102
Identity = 13/34 (38.24%), Postives = 24/34 (70.59%), Query Frame = 1
Query:  937 KAHPDVLHMKLQISEEGKLDERKGKTGKLQNTLL 1038
            KAH ++ +  LQ+ E+G+L + +G+T   +NT+L
Sbjct:  629 KAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVL 662          
BLAST of DY305489 vs. ExPASy Swiss-Prot
Match: CLPC_STAHJ (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus haemolyticus (strain JCSC1435) GN=clpC PE=3 SV=1)

HSP 1 Score: 371.318 bits (952), Expect = 6.703e-102
Identity = 190/355 (53.52%), Postives = 255/355 (71.83%), Query Frame = 2
Query:    2 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTGFQLIGSPPGYVGYTEGGQLTEAVPRPPFTVVPFDEIERLIPMSFT*SFKFPRKENWTNARGKLENSKILF*KMDPKVGKQ 1066
            TTLDEYRK+IEKD ALERRFQP++V EP+V++TI ILKGLR+RYE HH++  +DEAL +AA+LS  Y+SDRFLPDKAIDLIDEA S+VRL+    P   +E+E+E+ ++  EK+ AV  Q+FE A  LRD++  L+ Q     ++ K      T  GD    +++ DI  +++ WTGIP+ K++  ESDRLL +E+TLH RVIGQ++AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA   FG E+AMIR+DMSEFME+H   +L+G+PPGYVG+ EGGQLTE V R P++V+ FDEIE+  P  F    +     + T+ +G+  + +     M   VG Q
Sbjct:  315 TTLDEYRKNIEKDAALERRFQPIQVDEPTVEDTIAILKGLRDRYEAHHRINISDEALEAAAKLSDCYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQYEDAKNEWK------TTQGDQSTSLSKEDIGEVIAGWTGIPLTKINETESDRLLNLEQTLHDRVIGQNDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEEDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDEGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRQVDFRNTVIIMTSNVGAQ 663          
BLAST of DY305489 vs. ExPASy Swiss-Prot
Match: CLPC_STAAS (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain MSSA476) GN=clpC PE=3 SV=1)

HSP 1 Score: 363.999 bits (933), Expect = 1.070e-99
Identity = 183/355 (51.55%), Postives = 253/355 (71.27%), Query Frame = 2
Query:    2 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTGFQLIGSPPGYVGYTEGGQLTEAVPRPPFTVVPFDEIERLIPMSFT*SFKFPRKENWTNARGKLENSKILF*KMDPKVGKQ 1066
            TTLDEYRK+IEKD ALERRFQPV+V EPSV +T+ ILKGLR+RYE HH++  +DEA+ +A +LS +Y+SDRFLPDKAIDLIDEA S+VRL+    P   +E+E+E+ ++  EK+ AV  Q+FE A  LRD++  L+ Q     ++ K      + +      ++E DI  +++ WTGIP+ K++  ES++LL +E+TLH+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA   FG ++AMIR+DMSEFME+H   +L+G+PPGYVG+ +GGQLTE V R P++V+ FDEIE+  P  F    +     + T+ +G+  + +     M   VG Q
Sbjct:  315 TTLDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQYEEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTKINETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQ 663          
BLAST of DY305489 vs. ExPASy Swiss-Prot
Match: CLPC_STAAR (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain MRSA252) GN=clpC PE=3 SV=1)

HSP 1 Score: 363.999 bits (933), Expect = 1.070e-99
Identity = 183/355 (51.55%), Postives = 253/355 (71.27%), Query Frame = 2
Query:    2 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTGFQLIGSPPGYVGYTEGGQLTEAVPRPPFTVVPFDEIERLIPMSFT*SFKFPRKENWTNARGKLENSKILF*KMDPKVGKQ 1066
            TTLDEYRK+IEKD ALERRFQPV+V EPSV +T+ ILKGLR+RYE HH++  +DEA+ +A +LS +Y+SDRFLPDKAIDLIDEA S+VRL+    P   +E+E+E+ ++  EK+ AV  Q+FE A  LRD++  L+ Q     ++ K      + +      ++E DI  +++ WTGIP+ K++  ES++LL +E+TLH+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA   FG ++AMIR+DMSEFME+H   +L+G+PPGYVG+ +GGQLTE V R P++V+ FDEIE+  P  F    +     + T+ +G+  + +     M   VG Q
Sbjct:  315 TTLDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQYEEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTKINETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQ 663          
BLAST of DY305489 vs. ExPASy Swiss-Prot
Match: CLPC_STAAN (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain N315) GN=clpC PE=1 SV=1)

HSP 1 Score: 363.999 bits (933), Expect = 1.070e-99
Identity = 183/355 (51.55%), Postives = 253/355 (71.27%), Query Frame = 2
Query:    2 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTGFQLIGSPPGYVGYTEGGQLTEAVPRPPFTVVPFDEIERLIPMSFT*SFKFPRKENWTNARGKLENSKILF*KMDPKVGKQ 1066
            TTLDEYRK+IEKD ALERRFQPV+V EPSV +T+ ILKGLR+RYE HH++  +DEA+ +A +LS +Y+SDRFLPDKAIDLIDEA S+VRL+    P   +E+E+E+ ++  EK+ AV  Q+FE A  LRD++  L+ Q     ++ K      + +      ++E DI  +++ WTGIP+ K++  ES++LL +E+TLH+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA   FG ++AMIR+DMSEFME+H   +L+G+PPGYVG+ +GGQLTE V R P++V+ FDEIE+  P  F    +     + T+ +G+  + +     M   VG Q
Sbjct:  315 TTLDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQYEEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTKINETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQ 663          
The following BLAST results are available for this feature:
BLAST of DY305489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 201
Match NameE-valueIdentityDescription
CLPC_STAS16.062e-10354.08ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPC_MYCLE2.645e-10257.91Probable ATP-dependent Clp protease ATP-binding su... [more]
CLPC_STAES3.009e-10253.24ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPC_STAEQ3.009e-10253.24ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPC_MYCTU3.451e-10258.23Probable ATP-dependent Clp protease ATP-binding su... [more]
CLPC_MYCBO3.451e-10258.23Probable ATP-dependent Clp protease ATP-binding su... [more]
CLPC_STAHJ6.703e-10253.52ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPC_STAAS1.070e-9951.55ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPC_STAAR1.070e-9951.55ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPC_STAAN1.070e-9951.55ATP-dependent Clp protease ATP-binding subunit clp... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1AG03RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305489 ID=DY305489; Name=DY305489; organism=Citrus sinensis; type=EST; length=1271bp
GACAACACTAGATGAATATAGAAAGCACATTGAGAAAGATCCAGCATTAG
AAAGACGATTCCAGCCAGTTAAAGTGCCAGAACCGTCAGTGGATGAAACC
ATACAAATTTTGAAAGGGCTTCGAGAGCGATATGAAATTCACCACAAGCT
TCGTTACACTGATGAAGCACTAGTTTCTGCTGCTCAGTTGTCATACCAGT
ACATCAGTGACCGTTTTCTCCCTGATAAAGCTATTGATTTGATTGATGAA
GCTGGTTCTCGGGTTCGTCTTCGTCATGCACAGCTCCCCGAGGAAGCTAG
AGAGCTTGAAAAAGAGCTCAGGCAGATAACTAAGGAGAAGAATGAGGCTG
TTCGTGGCCAAGACTTTGAAAAGGCTGGAGAGTTACGTGATAGAGAAATG
GACCTTAAGGCTCAGATATCTGCTCTTGTCGATAAAGGCAAAGAGATGAG
CAAGGCAGAGACTGAAGCAGGGGATGTTGGTCCTGTTGTGACTGAAGTGG
ACATTCAACACATTGTCTCAGCTTGGACGGGCATTCCGGTTGAAAAAGTC
TCGACTGATGAATCTGATCGCCTCCTCAAGATGGAAGAGACCCTTCACAA
GAGAGTTATTGGTCAGGATGAAGCTGTCAAAGCTATTAGTCGTGCTATCC
GGCGTGCACGTGTTGGACTCAAGAACCCCAATCGACCAATTGCTAGTTTC
ATCTTTTCTGGTCCAACTGGTGTCGGGAAGTCTGAACTGGCCAAAGCACT
GGCTGCCTATTACTTTGGCTCAGAGGAGGCCATGATCAGGCTTGATATGA
GTGAGTTCATGGAAAGACACACTGGTTTCCAGCTCATTGGTTCACCACCT
GGTTATGTTGGGTACACTGAGGGGGGTCAGCTGACTGAGGCTGTTCCCCG
TCCTCCTTTTACGGTTGTACCCTTTGATGAAATTGAAAGGCTCATCCCGA
TGTCCTTCACATGAAGCTTCAAATTTCCGAGGAAGGAAAATTGGACGAAC
GCAAGGGGAAAACTGGAAAACTCCAAAATACTCTTTTAAAAAATGGATCC
AAAGGTTGGAAAGCAGGGTAATTGAAAAAGGGGGGGACCCCCCCTTTGGG
TTTTGTTTTTTTATTATTAAGAGAAAAAAAAACCAGTTTTCCAAACGGGG
AATAAAAAAATTGGGGGAAACGCGGGGGGAAATTTGGAAACAACCTTACC
TTTCGGGGGCCCACAAATTTTCTTTTCGATAAAAAATAGGTGGTTAAAGA
GGAAAGGAAATGTGTTTGTTT
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