DY305487
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: TCPG_OXYGR (T-complex protein 1 subunit gamma OS=Oxytricha granulifera PE=3 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 7.904e-57 Identity = 114/198 (57.58%), Postives = 148/198 (74.75%), Query Frame = 2 Query: 272 VLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKCIKVGK 865 V +L + KRE G K ANI+A++AV+DI+RTTLGP+SMLKMLLD GGIV+TNDGNAILRE+DVAHPAAKSMIEL+R QDEEVGDGTTSVI+LAGE+L E F++++ HPTVI AY +ALE+ V + + ID + + +V SCIGTKF+S++G+LI DLA+ A +V G + E+D+K+ KV K Sbjct: 7 VFILNQNAKREQGRKAQTANIKAARAVSDIVRTTLGPKSMLKMLLDPMGGIVLTNDGNAILREIDVAHPAAKSMIELARAQDEEVGDGTTSVIILAGEILSAVESFLERDIHPTVIVGAYFQALEEIVRLTESYGEPIDIENENDLQKIVSSCIGTKFSSKWGNLIVDLAVKAVKSVYKKEGDYV-EIDVKRYAKVEK 203 HSP 2 Score: 23.0978 bits (48), Expect = 7.904e-57 Identity = 9/13 (69.23%), Postives = 11/13 (84.62%), Query Frame = 3 Query: 855 KLEKVPGGPLENS 893 K+EK+PGG LE S Sbjct: 200 KVEKIPGGLLEES 212
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: TCPG_THAWE (T-complex protein 1 subunit gamma OS=Thalassiosira weissflogii PE=2 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 7.118e-56 Identity = 114/211 (54.03%), Postives = 148/211 (70.14%), Query Frame = 2 Query: 269 PVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTV------------GVDLGQGLREVDIKKCIKVGK 865 P++VL +R +G + NIQA++AVADIIR+TLGPRSMLKMLLD GGIV+TNDGN ILRE+DV+HP AKSMIELSR DEEVGDGTTSVI+LAGEML AE F+ N HPT+I R YN AL++A+ + ++ A+ +D +D + LV+SCIG KF+S++ D++ D+A+ A TV D+ EVDIK+ KV K Sbjct: 8 PIMVLNSKTQRSTGRQAQLGNIQAARAVADIIRSTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVSHPTAKSMIELSRAHDEEVGDGTTSVIILAGEMLINAEPFVRTNIHPTIIVRGYNYALQEALTICEEWALVVDVHDSERVKSLVQSCIGAKFSSRWNDIMIDMALKAVLTVSRESRTPSFTPEANDVYAQKMEVDIKRYAKVEK 218
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: TCPG_YEAST (T-complex protein 1 subunit gamma OS=Saccharomyces cerevisiae GN=CCT3 PE=1 SV=2) HSP 1 Score: 209.92 bits (533), Expect = 1.220e-54 Identity = 109/208 (52.40%), Postives = 152/208 (73.08%), Query Frame = 2 Query: 260 MHSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEML-HVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLR-----EVDIKKCIKVGK 865 M +PV+ + S +R +G + +NI A+KAVAD+IRT LGP++MLKMLLD GG+V+TNDG+AILRE+DVAHPAAKSM+ELSRTQDEEVGDGTT+VI+LAGE+L A I+KN HP +I +A KAL DA+ V+ +++ +D + A M L+++ IGTK+ + + + +LA+DA TV DLGQ + E+DIK+ ++V K Sbjct: 1 MQAPVVFMNASQERTTGRQAQISNITAAKAVADVIRTCLGPKAMLKMLLDPMGGLVLTNDGHAILREIDVAHPAAKSMLELSRTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQVSKPVDVENDAAMKKLIQASIGTKYVIHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEK 208 HSP 2 Score: 26.1794 bits (56), Expect = 1.220e-54 Identity = 22/86 (25.58%), Postives = 43/86 (50.00%), Query Frame = 3 Query: 840 LRSALKLEKVPGGPLENSKGS*RIYVPQKSFLPLEKWEKKIVNPRFYPLLIPPLYIKKRKKINTLADFGLKRKTWGNPVLKWEKKK 1097 ++ +++EK+PGG + +S+ + + + P K + I NPR L P Y K + N + K + W N +L+ E+++ Sbjct: 200 IKRYVRVEKIPGGDVLDSRVLKGVLLNKDVVHP--KMSRHIENPRVVLLDCPLEYKKGESQTNIEIE---KEEDW-NRILQIEEEQ 279
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: TCPG_DICDI (T-complex protein 1 subunit gamma OS=Dictyostelium discoideum GN=cct3 PE=1 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 2.532e-53 Identity = 107/202 (52.97%), Postives = 145/202 (71.78%), Query Frame = 2 Query: 260 MHSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKCIKVGK 865 M+ PV VL + KRE+ + A K+VA II+T LGP++MLKM+LD G VVTNDGNAILRE+DV HPAAKSMIELSR QDE VGDGTTSV++LA E+L +E FI+K HP I +A+ AL+D+++++D+ ++AID +R +L +V+SCIGTKF ++G L+ +LA+DA TV + G E+DIK+ KV K Sbjct: 1 MNQPVFVLNTNAKRENQKEAQQGIFLAVKSVASIIKTCLGPKAMLKMILDPMGTTVVTNDGNAILREIDVTHPAAKSMIELSRAQDENVGDGTTSVVILAAEVLASSELFIEKKIHPHYIIKAFRMALDDSLSIVDQYSVAIDLKNRPEVLKVVQSCIGTKFIGKWGSLMCNLALDAVMTVHIQEEDGRSEIDIKRYAKVEK 202
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: THSA_ARCFU (Thermosome subunit alpha OS=Archaeoglobus fulgidus GN=thsA PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 1.702e-41 Identity = 83/183 (45.36%), Postives = 122/183 (66.67%), Query Frame = 2 Query: 254 TIMHSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTV 802 T+ +PVL+LK+ +R G NI A++ +A+ +++TLGP+ M KML+D+ G +V+TNDG IL+E+DV HPAAK +IE+++TQD EVGDGTT+ +VLAGE+L AEE +D++ HPTVI R Y A AV +L+ IAM ID D T+ + + I K + D ++ L ++A V Sbjct: 3 TLQGTPVLILKEGTQRTVGRDAQRMNIMAARVIAEAVKSTLGPKGMDKMLVDSLGDVVITNDGVTILKEMDVEHPAAKMIIEVAKTQDNEVGDGTTTAVVLAGELLKKAEELLDQDIHPTVIARGYRMAANKAVEILESIAMDIDVEDEETLKKIAATAITGKHSEYALDHLSSLVVEAVKRV 185
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: THSA_AERPE (Thermosome subunit alpha OS=Aeropyrum pernix GN=thsA PE=3 SV=2) HSP 1 Score: 167.548 bits (423), Expect = 1.441e-40 Identity = 82/193 (42.49%), Postives = 131/193 (67.88%), Query Frame = 2 Query: 269 PVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTNDRATMLGLVKSCIGTKF--TSQFGDLIADLAIDATTTVGVDLGQGLREVDI 841 PVL+LK+ +R G + ANI A++ +A++++++LGPR + KML+DA G I VTNDG I++E+++ HPAAK ++E+++ QD EVGDGTTSV+VLAG +L AE+ +D+N HPT+I Y KA+E+A+ ++D+ A+ ++ D + + + ++ + +KF T D I + IDA TV G EVD+ Sbjct: 7 PVLILKEGTQRTYGREALRANILAARVLAEMLKSSLGPRGLDKMLVDAFGDITVTNDGATIVKEMEIQHPAAKLLVEVAKAQDAEVGDGTTSVVVLAGALLEKAEKLLDENLHPTIIIEGYTKAMEEALRLVDEAAVPVEVEDDSVLRRIAETTLASKFVGTGPERDKIISMVIDAIRTVAEKRPDGGYEVDL 199
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: THSA_THEK1 (Thermosome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=thsA PE=1 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 3.210e-40 Identity = 87/216 (40.28%), Postives = 135/216 (62.50%), Query Frame = 2 Query: 269 PVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVG--------VDL---------GQGLREVDIKKCIKVGK 865 PV++L + +R G NI A++ +A+ +RTTLGP+ M KML+D+ G IVVTNDG IL ++D+ HPAAK M+E+++TQD+E GDGTT+ +V+AGE+L AEE +D+N HP++I + Y A E A +LD+IA+ +D +D T+L + + I K +L+A LA++A V VDL G+G+ E ++ + + + K Sbjct: 8 PVVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILDEIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDK 223
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: THSA_PYRKO (Thermosome subunit alpha OS=Pyrococcus kodakaraensis GN=thsA PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 3.210e-40 Identity = 87/216 (40.28%), Postives = 135/216 (62.50%), Query Frame = 2 Query: 269 PVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVG--------VDL---------GQGLREVDIKKCIKVGK 865 PV++L + +R G NI A++ +A+ +RTTLGP+ M KML+D+ G IVVTNDG IL ++D+ HPAAK M+E+++TQD+E GDGTT+ +V+AGE+L AEE +D+N HP++I + Y A E A +LD+IA+ +D +D T+L + + I K +L+A LA++A V VDL G+G+ E ++ + + + K Sbjct: 8 PVVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILDEIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDK 223
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: THSA_THEK8 (Thermosome subunit alpha OS=Thermococcus sp. (strain KS-8) GN=thsA PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 1.220e-39 Identity = 86/216 (39.81%), Postives = 135/216 (62.50%), Query Frame = 2 Query: 269 PVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVG--------VDL---------GQGLREVDIKKCIKVGK 865 PV++L + +R G NI A++ +A+ +RTTLGP+ M KML+D+ G IVVTNDG IL ++D+ HPAAK M+E+++TQD+E GDGTT+ +V+AGE+L AEE +D+N HP++I + Y A E A +L++IA+ ++ +D T+L + + I K +L+A LA+DA V VDL G+G+ E ++ + + + K Sbjct: 8 PVVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILEEIAIKVNPDDEETLLRIAMTSITGKNAESHKELLAKLAVDAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDK 223
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: THSB_THEAC (Thermosome subunit beta OS=Thermoplasma acidophilum GN=thsB PE=1 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 1.593e-39 Identity = 83/194 (42.78%), Postives = 130/194 (67.01%), Query Frame = 2 Query: 257 IMHSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVD 838 I P+ +LK+ KRESG NI+A+ A+++ +R++LGPR M KML+D+ G IV+TNDG IL+E+DV HPAAK M+E+S+TQD VGDGTT+ +++AG +L A+ I++N HPTVI Y A E+A V+D+I+ I +++A +L + ++ + +K S D +A+++ +A +V +L G VD Sbjct: 2 IAGQPIFILKEGTKRESGKDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITNDGVTILKEMDVEHPAAKMMVEVSKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTKIGADEKALLLKMAQTSLNSKSASVAKDKLAEISYEAVKSV-AELRDGKYYVD 194 The following BLAST results are available for this feature:
BLAST of DY305487 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 153
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305487 ID=DY305487; Name=DY305487; organism=Citrus sinensis; type=EST; length=1254bpback to top |