DY305487
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: CH601_ROSCS (60 kDa chaperonin 1 OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=groL1 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 8.239e-12 Identity = 47/147 (31.97%), Postives = 80/147 (54.42%), Query Frame = 2 Query: 350 VADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHP----AAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADL 778 VAD ++TTLGPR + G VT+DG + +E+++ P A+ ++E++ ++ VGDGTT+ VLA +++ + + +P +I R +KA+E VA L + AI DRA + + + S+ GDLIA++ Sbjct: 22 VADAVKTTLGPRGRNVSIDKKFGAPTVTHDGVTVAKEIELKDPFENMGARLLVEVATKTNDVVGDGTTTATVLAQSIVNEGLKMVAAGANPMLIKRGLDKAVEAVVAELKSV--AIPVRDRADIAHVAAI---SAADSEIGDLIAEV 163
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: CH60_NAUPA (60 kDa chaperonin OS=Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) GN=groL PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 4.089e-11 Identity = 43/157 (27.39%), Postives = 82/157 (52.23%), Query Frame = 2 Query: 350 VADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPA----AKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGV 808 +AD +R T+GP+ +L + G +T DG ++ +E+++ HP A+ + E++ +E GDGTT+ VLA + ++I +P + R +KA+E +A L K++ ++ ++ + + I + G+LIA+ A+D GV Sbjct: 23 LADAVRVTMGPKGRNVLLQRSFGAPHITKDGVSVAKEIELKHPVENMGAQLVKEVASKTADEAGDGTTTATVLAHAVFKEGLKYITAGANPVAVKRGMDKAVEAIIAELKKMSKTVENKEQIAQV----ATISANNDKKIGELIAE-AMDKVGKDGV 174
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: CH602_PROAC (60 kDa chaperonin 2 OS=Propionibacterium acnes GN=groL2 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 6.974e-11 Identity = 46/164 (28.05%), Postives = 77/164 (46.95%), Query Frame = 2 Query: 350 VADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHP----AAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTNDRATMLGLVKS---CIGTKFTSQFGDLIAD--LAIDATTTVGVDL 814 +AD ++ TLGP+ +L G +TNDG + +E+D+ P A+ E++ ++ GDGTT+ VLA ++H + +P + R KA++ V L I+ AIDT + + S IG F + D + +D + T G +L Sbjct: 23 LADTVKVTLGPKGRYVVLDKKWGAPTITNDGVTVAKEVDLTDPYENLGAQLAKEVATKTNDVAGDGTTTATVLAQALVHEGLRAVASGANPVGLKRGIEKAVDAVVEELRSISRAIDTTSDMASVATISSRDETIGALIAEAFDKVGKDGVITVDESQTFGTEL 186 The following BLAST results are available for this feature:
BLAST of DY305487 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 153
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305487 ID=DY305487; Name=DY305487; organism=Citrus sinensis; type=EST; length=1254bpback to top |