DY305487
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: TCPD_HUMAN (T-complex protein 1 subunit delta OS=Homo sapiens GN=CCT4 PE=1 SV=4) HSP 1 Score: 151.754 bits (382), Expect = 8.181e-36 Identity = 74/190 (38.95%), Postives = 118/190 (62.11%), Query Frame = 2 Query: 299 RESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLA-------IDATTTVGVDLGQGLREVDIKK 847 R+ ++ +NI A+KAVAD IRT+LGP+ M KM+ D G + +TNDG IL+++ V HPAA+ ++ELS+ QD E GDGTTSV+++AG +L + + K HPT+I ++ KALE + +L ++ ++ +DR T+L + + +K SQ+ L++ ++ ID T VD LR++ I K Sbjct: 27 RDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELSDRETLLNSATTSLNSKVVSQYSSLLSPMSVNAVMKVIDPATATSVD----LRDIKIVK 212
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: TCPD_BOVIN (T-complex protein 1 subunit delta OS=Bos taurus GN=CCT4 PE=2 SV=3) HSP 1 Score: 150.984 bits (380), Expect = 1.396e-35 Identity = 68/168 (40.48%), Postives = 110/168 (65.48%), Query Frame = 2 Query: 299 RESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTV 802 R+ ++ +NI A+KAVAD IRT+LGP+ M KM+ D G + +TNDG IL+++ V HPAA+ ++ELS+ QD E GDGTTSV+++AG +L + + K HPT+I ++ KALE + +L ++ + +DR T+L + + +K SQ+ L++ +++DA V Sbjct: 30 RDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPEELSDRETLLNSAATSLNSKVVSQYSSLLSPMSVDAVMKV 197
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: TCPD_TAKRU (T-complex protein 1 subunit delta OS=Takifugu rubripes GN=cct4 PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 2.380e-35 Identity = 68/168 (40.48%), Postives = 109/168 (64.88%), Query Frame = 2 Query: 299 RESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTV 802 R+ ++ ++NI A+KAVAD +RT+LGP+ M KM+ D G + +TNDG IL+++ V HP+AK ++ELS+ QD E GDGTTSV+V+AG +L + + HPT+I ++ KA++ V VL ++ + DR T+L + + +K SQ+ L+A +++DA V Sbjct: 24 RDKPAQIRYSNISAAKAVADAVRTSLGPKGMDKMIQDEKGDVTITNDGATILKQMQVLHPSAKMLVELSKAQDIEAGDGTTSVVVIAGALLDSCNRLLQRGIHPTIISESFQKAVDKGVEVLTAMSQPVQLGDRETLLNSATTSLCSKVVSQYSSLLAPMSVDAVMRV 191
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: TCPD_SCHPO (T-complex protein 1 subunit delta OS=Schizosaccharomyces pombe GN=cct4 PE=2 SV=2) HSP 1 Score: 150.214 bits (378), Expect = 2.380e-35 Identity = 74/168 (44.05%), Postives = 111/168 (66.07%), Query Frame = 2 Query: 299 RESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTV 802 RE +V +NI A+++VAD IRT+LGP+ M KM+ G +++TNDG IL+ L V HPAAK +++LS QD E GDGTTSV++LAG ML AE+ + K HPTVI ++ +A V + + A+AI+ +DR ++L + + +K SQ+ +L+A +A+DA V Sbjct: 14 REKPQEVRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLSVLHPAAKMLVDLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFTVDCMKENALAIELSDRESLLRAATTSLNSKIVSQYSNLLAPIAVDAVLKV 181
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: TCPD_RAT (T-complex protein 1 subunit delta OS=Rattus norvegicus GN=Cct4 PE=1 SV=3) HSP 1 Score: 150.214 bits (378), Expect = 2.380e-35 Identity = 74/190 (38.95%), Postives = 117/190 (61.58%), Query Frame = 2 Query: 299 RESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLA-------IDATTTVGVDLGQGLREVDIKK 847 R+ ++ +NI A+KAVAD IRT+LGP+ M KM+ D G + +TNDG IL+++ V HPAA+ ++ELS+ QD E GDGTTSV+++AG +L + + K HPT+I ++ KALE + +L ++ + +DR T+L + + +K SQ+ L++ ++ ID T VD LR++ I K Sbjct: 27 RDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGLEILTDMSRPVQLSDRETLLNSATTSLNSKVVSQYSSLLSPMSVNAVMKVIDPATATSVD----LRDIKIVK 212
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: TCPD_MOUSE (T-complex protein 1 subunit delta OS=Mus musculus GN=Cct4 PE=1 SV=3) HSP 1 Score: 150.214 bits (378), Expect = 2.380e-35 Identity = 74/190 (38.95%), Postives = 117/190 (61.58%), Query Frame = 2 Query: 299 RESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLA-------IDATTTVGVDLGQGLREVDIKK 847 R+ ++ +NI A+KAVAD IRT+LGP+ M KM+ D G + +TNDG IL+++ V HPAA+ ++ELS+ QD E GDGTTSV+++AG +L + + K HPT+I ++ KALE + +L ++ + +DR T+L + + +K SQ+ L++ ++ ID T VD LR++ I K Sbjct: 27 RDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGLEILTDMSRPVQLSDRETLLNSATTSLNSKVVSQYSSLLSPMSVNAVMKVIDPATATSVD----LRDIKIVK 212
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: THSA_SULTO (Thermosome subunit alpha OS=Sulfolobus tokodaii GN=thsA PE=1 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 3.109e-35 Identity = 79/209 (37.80%), Postives = 134/209 (64.11%), Query Frame = 2 Query: 263 HSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTND------RATMLGLVKSCIGTKFTS--QFGDLIADLAIDATTTVGVDLGQGLREVDIKKCIKVGK 865 ++PVL+LK+ +R SG NI A+ +A++++++LGPR + KML+D+ G + +TNDG I++E+++ HPAAK ++E ++ QD EVGDGTTS +VLAG +L A++ +D+N HPT+I Y KAL ++ ++D++A ID ++ R + +V + + +KF + + D I ++ IDA + V L +G V + IK+ K Sbjct: 3 NAPVLLLKEGTQRSSGRDALKNNILAAVTLAEMLKSSLGPRGLDKMLIDSFGDVTITNDGATIVKEMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGLLLDKADDLLDQNIHPTIIIEGYKKALNKSLEIIDQLATKIDVSNLNSLATRDQLKKIVYTTMSSKFIAGGEEMDKIMNMVIDAVSIVAEPLPEGGYNVPL-DLIKIDK 210
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: THSB_DESMO (Thermosome subunit beta (Fragment) OS=Desulfurococcus mobilis GN=thsB PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 5.303e-35 Identity = 69/169 (40.83%), Postives = 112/169 (66.27%), Query Frame = 2 Query: 296 KRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTV 802 +R +G NI A++A++++I+TT GP+ M KML+DA G + +TNDG IL + ++ HPAAK +++++++QD EVGDGT ++LAGE+L AEE +DKN HPTVI Y A+E+A+ +LD++A ID N+ + + ++ + +K + AD+A+ A V Sbjct: 1 QRTTGRDALRTNILAARAISEMIKTTYGPKGMDKMLVDALGDVTITNDGATILDKAEIQHPAAKMLVQVAKSQDSEVGDGTKRAVILAGELLKYAEELLDKNIHPTVIISGYRMAMEEALKILDQMAEPIDLNNEELLRKVARTSLTSKAVHDAREFFADIAVKAVKQV 169
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: THS3_HALVO (Thermosome subunit 3 OS=Halobacterium volcanii GN=cct3 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 1.181e-34 Identity = 78/204 (38.24%), Postives = 115/204 (56.37%), Query Frame = 2 Query: 260 MHSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKCIKVGKGS 871 M P+ +L + R G +NI+A KAVA+ +RTTLGPR M KML+D+SG +V+TNDG IL ++D+ HPAA+ ++E+S+TQ+EEVGDGTT+ VL GE+L AE+ +D + HPTVI Y +A A +D + + + +D S G D++A + A V D D++ + G S Sbjct: 5 MQQPLYILAEGTNRTHGRSAQDSNIRAGKAVAEAVRTTLGPRGMDKMLVDSSGEVVITNDGATILEKMDIEHPAAQMLVEVSQTQEEEVGDGTTTAAVLTGELLAHAEDLLDDDLHPTVIVEGYTEAARIAQDAIDDMVLDVTLDDDLLRKVAESSMTGKGTGDVTADVLAKHVVKAVQMVHEDDNGVFHRDDVRVLTRTGASS 208
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: TCPD_ASHGO (T-complex protein 1 subunit delta OS=Ashbya gossypii GN=CCT4 PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.543e-34 Identity = 75/188 (39.89%), Postives = 117/188 (62.23%), Query Frame = 2 Query: 299 RESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKCIKVG 862 RE +V ANI A++AVAD IRT+LGP+ M KM+ A G I+++NDG+ IL+++ + HP AK ++E+S QD E GDGTTSV++L G +L AE+ + K HPT+I ++ +A + AV VL ++ I DRA ++ + + +K SQ+ +A LA+D ++ + + DI+ KVG Sbjct: 15 REKPQEVRKANIIAARAVADAIRTSLGPKGMDKMIKTARGEILISNDGHTILKQMAILHPVAKMLVEVSAAQDSEAGDGTTSVVILTGALLGAAEKLLAKGIHPTIIAESFQRAGQRAVEVLLGMSKRISLQDRAELVRAASTSLSSKIVSQYSTFLAPLAVDCVLSLTNEASTNVDLNDIRLVKKVG 202 The following BLAST results are available for this feature:
BLAST of DY305487 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 153
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305487 ID=DY305487; Name=DY305487; organism=Citrus sinensis; type=EST; length=1254bpback to top |