DY305487
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: TCPA_SCHMA (T-complex protein 1 subunit alpha OS=Schistosoma mansoni GN=TCP-1A PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 3.329e-29 Identity = 68/176 (38.64%), Postives = 108/176 (61.36%), Query Frame = 2 Query: 296 KRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAIDTN--DRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLG 817 +R SG V N+ A+ + A+ ++T+LGP + KML+D G + +TNDG IL+ LDV HPAAK +++L++ QDEEVGDGTTSV++LA +L A+E I + HPT + Y A +A + + MA D N +A ++ + ++ + +K + D+ + +A+DA V V G Sbjct: 7 ERTSGESVRKQNVLAACSFANFVKTSLGPVGLDKMLVDDVGDVTITNDGATILKLLDVEHPAAKILVQLAQLQDEEVGDGTTSVVILAAALLKNADELISRFVHPTTVINGYRLACREACKYIQE-HMAYDVNKLGKAGLINVARTAMSSKLINLDADMFSQMAVDALMAVEVSGG 181
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: TCPA_PALPA (T-complex protein 1 subunit alpha OS=Paleosuchus palpebrosus GN=TCP1 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 5.679e-29 Identity = 67/182 (36.81%), Postives = 110/182 (60.44%), Query Frame = 2 Query: 260 MHSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVL-DKIAMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTV 802 + P+ VL + R SG V + N+ A+ +A+I++++LGP + KML+D G + +TNDG IL+ L+V HPAAK + EL+ QD+EVGDGTTSV+++A E+L ++E + + HPT I Y A ++AV + + + + D R ++ K+ + +K GD A + +DA + V Sbjct: 4 LEGPLAVLGE---RSSGDTVRNQNVTAAATIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELAELQDKEVGDGTTSVVIIAAELLKNSDELVKQKIHPTSIIGGYRLACKEAVRYINENLIINTDELGRDCLINSAKTSMSSKIIGIDGDFFASMVVDAASAV 182
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: TCPA_RAT (T-complex protein 1 subunit alpha OS=Rattus norvegicus GN=Tcp1 PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 7.417e-29 Identity = 66/182 (36.26%), Postives = 109/182 (59.89%), Query Frame = 2 Query: 260 MHSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVL-DKIAMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTV 802 M P+ V D R +G + N+ A+ ++A+I++++LGP + KML+D G + +TNDG IL+ L+V HPAAK + EL+ QD+EVGDGTTSV+++A E+L A+E + + HPT + Y A ++AV + + + + D R ++ K+ + +K GD A++ +DA V Sbjct: 1 MEGPLSVFGD---RSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYINENLIINTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAV 179
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: TCPA_CRIGR (T-complex protein 1 subunit alpha OS=Cricetulus griseus GN=TCP1 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 7.417e-29 Identity = 66/182 (36.26%), Postives = 109/182 (59.89%), Query Frame = 2 Query: 260 MHSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVA-VLDKIAMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTV 802 M P+ V D R +G + N+ A+ ++A+I++++LGP + KML+D G + +TNDG IL+ L+V HPAAK + EL+ QD+EVGDGTTSV+++A E+L A+E + + HPT + Y A ++AV + + + + D R ++ K+ + +K GD A++ +DA V Sbjct: 1 MEGPLSVFGD---RSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAV 179
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: TCPA_BOVIN (T-complex protein 1 subunit alpha OS=Bos taurus GN=TCP1 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 7.417e-29 Identity = 66/182 (36.26%), Postives = 109/182 (59.89%), Query Frame = 2 Query: 260 MHSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVA-VLDKIAMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTV 802 M P+ V D R +G + N+ A+ ++A+I++++LGP + KML+D G + +TNDG IL+ L+V HPAAK + EL+ QD+EVGDGTTSV+++A E+L A+E + + HPT + Y A ++AV + + + + D R ++ K+ + +K GD A+L +DA + Sbjct: 1 MEGPLSVFGD---RSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTDELGRDCLINAAKTSMSSKVIGINGDFFANLVVDAVLAI 179
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: TCPA_HUMAN (T-complex protein 1 subunit alpha OS=Homo sapiens GN=TCP1 PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 9.687e-29 Identity = 65/182 (35.71%), Postives = 109/182 (59.89%), Query Frame = 2 Query: 260 MHSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVL-DKIAMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTV 802 M P+ V D R +G + N+ A+ ++A+I++++LGP + KML+D G + +TNDG IL+ L+V HPAAK + EL+ QD+EVGDGTTSV+++A E+L A+E + + HPT + Y A ++AV + + + + D R ++ K+ + +K GD A++ +DA + Sbjct: 1 MEGPLSVFGD---RSTGETIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYINENLIVNTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAI 179
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: TCPE_YEAST (T-complex protein 1 subunit epsilon OS=Saccharomyces cerevisiae GN=CCT5 PE=1 SV=3) HSP 1 Score: 127.102 bits (318), Expect = 2.158e-28 Identity = 69/187 (36.90%), Postives = 117/187 (62.57%), Query Frame = 2 Query: 260 MHSPVLVLKD--SLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVL----DKIAMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTV 802 M P +++KD + KR+ G + ++I A+++VA II+T+LGPR + K+L+ G I +TNDG IL ++++ + AK +++LS++QD+E+GDGTT V+VLA +L A E I K HP I +++A + A++ L D I+ + D R +L K+ +G+K S+ D A++A++A V Sbjct: 25 MGRPFIIVKDQGNKKRQHGLEAKKSHILAARSVASIIKTSLGPRGLDKILISPDGEITITNDGATILSQMELDNEIAKLLVQLSKSQDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISASNDELFRDFLLRAAKTSLGSKIVSKDHDRFAEMAVEAVINV 211
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: TCPE_DICDI (T-complex protein 1 subunit epsilon OS=Dictyostelium discoideum GN=cct5 PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 2.158e-28 Identity = 64/183 (34.97%), Postives = 116/183 (63.39%), Query Frame = 2 Query: 266 SPVLVLKDSLKRES--GTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMAID--TNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTV 802 +P +V++D +E G + H ++I A+K +++I++++LGP+ M KM++ G ++VTNDG IL + V + AK M++LS++QD+E+GDGTT V+VLAG +L AE+ I+K HP I Y A + A L I+ +I+ ++ ++ +C+G+K ++F ++++A+ A +V Sbjct: 10 NPFIVIRDQQAKERLRGIEAHRSHILAAKTISNIMKSSLGPKGMDKMMVSQDGEVLVTNDGATILENMQVDNQIAKLMVQLSKSQDDEIGDGTTGVVVLAGSLLEQAEQLIEKGIHPCRIYEGYETACKIATEHLKTISDSIEFSKDNIEPLIKTAMTCLGSKIVNRFHRQMSEIAVKAVISV 192
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: TCPA2_MOUSE (T-complex protein 1 subunit alpha B OS=Mus musculus GN=Tcp1 PE=1 SV=3) HSP 1 Score: 127.102 bits (318), Expect = 2.158e-28 Identity = 66/182 (36.26%), Postives = 108/182 (59.34%), Query Frame = 2 Query: 260 MHSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVL-DKIAMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTV 802 M P+ V D R +G V N+ A+ ++A+I++++ GP + KML+D G + +TNDG IL+ L+V HPAAK + EL+ QD+EVGDGTTSV+++A E+L A+E + + HPT + Y A ++AV + + + + D R ++ K+ + +K GD A++ +DA V Sbjct: 1 MEGPLSVFGD---RSTGEAVRSQNVMAAASIANIVKSSFGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYINENLIINTDELGRDCLINAAKTSMSSKIIGINGDYFANMVVDAVLAV 179
BLAST of DY305487 vs. ExPASy Swiss-Prot
Match: TCPA1_MOUSE (T-complex protein 1 subunit alpha A OS=Mus musculus GN=Tcp1 PE=1 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 2.158e-28 Identity = 66/182 (36.26%), Postives = 108/182 (59.34%), Query Frame = 2 Query: 260 MHSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVL-DKIAMAIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTV 802 M P+ V D R +G + N+ A+ ++A+I++++LGP + KML+D G + +TNDG IL+ L+V HPAAK + EL+ QD+EVGDGTTSV+++A E+L A+E + + HPT + Y A ++AV + + + + D R + K+ + +K GD A++ +DA V Sbjct: 1 MEGPLSVFGD---RSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYINENLIINADELGRDCLTNTAKTSMSSKIIGINGDYFANMVVDAVLAV 179 The following BLAST results are available for this feature:
BLAST of DY305487 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 153
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305487 ID=DY305487; Name=DY305487; organism=Citrus sinensis; type=EST; length=1254bpback to top |