DY305483

Overview
NameDY305483
Unique NameDY305483
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1264
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305483 vs. ExPASy Swiss-Prot
Match: FRI4_ARATH (Ferritin-4, chloroplastic OS=Arabidopsis thaliana GN=FER4 PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 1.007e-57
Identity = 130/242 (53.72%), Postives = 150/242 (61.98%), Query Frame = 2
Query:  134 SCYSKSNASLVKLGGI-------LPRTKRSLKVSAAVDAN------------SMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGEKVKLHSIMQPPSEFDHAEKGDALYAMELALSLENLTNEKLLSLRSVADKNNDPQMENFFKSEFLGEQVEAINKNR*YVSQLKMVGKRPG 802
            S  S S  SLV   G+       LP    +L+VS+    N            +  L+GVVF+PF+EVKKE            ARQKY DECEAAINEQINVEYNVSYVYHA+YAYFDRDNIAL+GL                  MEYQN RG +VKL SI+ P SEF+H +KGDALY MELALSLE L NEKLL+L SVA KNND  + +F +SEFL EQVEAI     YV+QL+ VGK  G
Sbjct:    7 SSSSSSALSLVNFHGVKKDVSPLLPSISSNLRVSSGKSGNLTFSFRASKSSTTDALSGVVFEPFKEVKKELDLVPTSSHLSLARQKYSDECEAAINEQINVEYNVSYVYHAMYAYFDRDNIALKGLAKFFKESSLEEREHAEKLMEYQNKRGGRVKLQSIVMPLSEFEHVDKGDALYGMELALSLEKLVNEKLLNLHSVASKNNDVHLADFIESEFLTEQVEAIKLISEYVAQLRRVGKGHG 248          
BLAST of DY305483 vs. ExPASy Swiss-Prot
Match: FRI2_ARATH (Ferritin-2, chloroplastic OS=Arabidopsis thaliana GN=FER2 PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 1.007e-57
Identity = 119/198 (60.10%), Postives = 137/198 (69.19%), Query Frame = 2
Query:  209 VSAAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGEKVKLHSIMQPPSEFDHAEKGDALYAMELALSLENLTNEKLLSLRSVADKNNDPQMENFFKSEFLGEQVEAINKNR*YVSQLKMVGKRPG 802
            V AA   N+  LTGVVF+PFEEVKKE            AR K+ D+ E+AIN+QINVEYNVSYVYHALYAYFDRDN+ L+G                   MEYQN RG +VKL SI+ P SEFDH EKGDAL+AMELALSLE LTNEKLL L+SV  KNND Q+ +F +SEFLGEQVEAI K   YV+QL+ +GK  G
Sbjct:   43 VQAAKGTNTKSLTGVVFEPFEEVKKEMELVPTTPFVSLARHKFSDDSESAINDQINVEYNVSYVYHALYAYFDRDNVGLKGFAKFFNDSSLEERGHAEMFMEYQNKRGGRVKLQSILMPVSEFDHEEKGDALHAMELALSLEKLTNEKLLKLQSVGVKNNDVQLVDFVESEFLGEQVEAIKKISEYVAQLRRIGKGHG 240          
BLAST of DY305483 vs. ExPASy Swiss-Prot
Match: FRI2_SOYBN (Ferritin-2, chloroplastic OS=Glycine max PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 2.242e-57
Identity = 118/202 (58.42%), Postives = 146/202 (72.28%), Query Frame = 2
Query:  197 RSLKVSAAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGEKVKLHSIMQPPSEFDHAEKGDALYAMELALSLENLTNEKLLSLRSVADKNNDPQMENFFKSEFLGEQVEAINKNR*YVSQLKMVGKRPG 802
            RS +V AA +A + PL GV+F+PF+E+KK+          X ARQ Y D+ E+AINEQINVEYNVSYVYHAL+AYFDRDNIAL+GL                  ++YQN+RG +V LH I  PPSEF+H+EKGDALYAMELALSLE LTNEKLL + SVA++NNDPQ  +F +SEFL EQV++I K   YV+QL++VGK  G
Sbjct:   42 RSSRVCAASNAPA-PLAGVIFEPFQELKKDYLAVPIAHNVXLARQNYADDSESAINEQINVEYNVSYVYHALFAYFDRDNIALKGLAKFFKESSEEEREHAEQLIKYQNIRGGRVVLHPITSPPSEFEHSEKGDALYAMELALSLEKLTNEKLLHVHSVAERNNDPQXADFIESEFLYEQVKSIKKIAEYVAQLRLVGKGHG 242          
BLAST of DY305483 vs. ExPASy Swiss-Prot
Match: FRI1_TOBAC (Ferritin-1, chloroplastic OS=Nicotiana tabacum GN=FER1 PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 1.113e-56
Identity = 115/206 (55.83%), Postives = 140/206 (67.96%), Query Frame = 2
Query:  185 PRTKRSLKVSAAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGEKVKLHSIMQPPSEFDHAEKGDALYAMELALSLENLTNEKLLSLRSVADKNNDPQMENFFKSEFLGEQVEAINKNR*YVSQLKMVGKRPG 802
            P+      VSA+   N  PLTGVVF+PFEE+KKE             RQKY D+CEAAINEQINVEYN SYVYHA++AYFDRDN+AL+GL                  ME+QN RG +VKL SI  PP+EFDH EKGDALYAMELAL LE LTN++LL+L +VA ++ND  + +F +SEFL EQV+AI K   YV+QL+ VG+  G
Sbjct:   31 PKNGNRFVVSASKATNHKPLTGVVFEPFEELKKELMLVPAVPDTSLCRQKYSDDCEAAINEQINVEYNNSYVYHAMFAYFDRDNVALKGLAKFFKESSLEEREHAEKLMEFQNKRGGRVKLLSICAPPTEFDHCEKGDALYAMELALCLEKLTNQRLLNLHAVASRSNDVHLADFLESEFLVEQVDAIKKISEYVAQLRRVGQGHG 236          
BLAST of DY305483 vs. ExPASy Swiss-Prot
Match: FRI3_ARATH (Ferritin-3, chloroplastic OS=Arabidopsis thaliana GN=FER3 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 4.229e-56
Identity = 117/200 (58.50%), Postives = 135/200 (67.50%), Query Frame = 2
Query:  203 LKVSAAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGEKVKLHSIMQPPSEFDHAEKGDALYAMELALSLENLTNEKLLSLRSVADKNNDPQMENFFKSEFLGEQVEAINKNR*YVSQLKMVGKRPG 802
            L+ S +    +  L+GVVF+PFEEVKKE            AR  Y  ECEAA+NEQINVEYNVSYVYHALYAYFDRDN+AL+GL                  MEYQN RG +VKL  ++ P SEFDH EKGDALYAMELALSLE L NEKLL+L SVA KN+D Q+ +F +S FL EQVEAI K   YVSQL+ +GK  G
Sbjct:   47 LRASKSSTTTTSTLSGVVFEPFEEVKKEMDLVPSGQQLSLARHLYSPECEAAVNEQINVEYNVSYVYHALYAYFDRDNVALKGLAKFFKESSVEEREHAELLMEYQNKRGGRVKLQPMVLPQSEFDHPEKGDALYAMELALSLEKLVNEKLLNLHSVASKNDDVQLADFIESVFLNEQVEAIKKISEYVSQLRRLGKGHG 246          
BLAST of DY305483 vs. ExPASy Swiss-Prot
Match: FRI1_PEA (Ferritin-1, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 218.779 bits (556), Expect = 5.523e-56
Identity = 111/194 (57.22%), Postives = 134/194 (69.07%), Query Frame = 2
Query:  221 VDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGEKVKLHSIMQPPSEFDHAEKGDALYAMELALSLENLTNEKLLSLRSVADKNNDPQMENFFKSEFLGEQVEAINKNR*YVSQLKMVGKRPG 802
            V A + PLTGV+F+PFEEVKK+            ARQ + DECE+ INEQINVEYN SYVYH+L+AYFDRDN+AL+G                   M+YQN RG +V LH I   PSEF+H EKGDALYAMELALSLE LTNEKLL++ SVA++NND +M +F + E+L EQVEAI K   YV+QL+ VGK  G
Sbjct:   45 VSATTAPLTGVIFEPFEEVKKDYLAVPSVPLVSLARQNFADECESVINEQINVEYNASYVYHSLFAYFDRDNVALKGFAKFFKESSEEHREHAEKLMKYQNTRGGRVVLHPIKDVPSEFEHVEKGDALYAMELALSLEKLTNEKLLNVHSVAERNNDLEMTHFIEGEYLAEQVEAIKKISEYVAQLRRVGKGHG 238          
BLAST of DY305483 vs. ExPASy Swiss-Prot
Match: FRI2_MAIZE (Ferritin-2, chloroplastic OS=Zea mays GN=FER2 PE=1 SV=2)

HSP 1 Score: 208.379 bits (529), Expect = 7.465e-53
Identity = 111/203 (54.68%), Postives = 133/203 (65.52%), Query Frame = 2
Query:  188 RTKRSLKVSAAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGEKVKLHSIMQPPSEFDHAEKGDALYAMELALSLENLTNEKLLSLRSVADKNNDPQMENFFKSEFLGEQVEAINKNR*YVSQLKMVGKR 796
            R+  SL  +AA       L+GVVFQPFEE+K E            AR K+ D+CEAAINEQINVEYN SY YH+L+AYFDRDN+AL+G                   MEYQN RG +V+L SI+ P +EFDH EKGDALYAMEL L+LE L NEKL SL  VA + NDPQ+ +F +SEFL EQ EAINK   YV+QL+ VG +
Sbjct:   34 RSGVSLSAAAAAGKGKEVLSGVVFQPFEEIKGELALVPQSPDRSLARHKFVDDCEAAINEQINVEYNASYAYHSLFAYFDRDNVALKGFAKFFKESSDEEREHAEKLMEYQNKRGGRVRLQSIVAPLTEFDHPEKGDALYAMELTLALEKLVNEKLHSLHGVATRCNDPQLIDFIESEFLEEQGEAINKVSKYVAQLRRVGNK 236          
BLAST of DY305483 vs. ExPASy Swiss-Prot
Match: FRI1_MAIZE (Ferritin-1, chloroplastic OS=Zea mays GN=FER1 PE=1 SV=2)

HSP 1 Score: 206.068 bits (523), Expect = 3.705e-52
Identity = 107/187 (57.22%), Postives = 128/187 (68.45%), Query Frame = 2
Query:  242 LTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGEKVKLHSIMQPPSEFDHAEKGDALYAMELALSLENLTNEKLLSLRSVADKNNDPQMENFFKSEFLGEQVEAINKNR*YVSQLKMVGKRPG 802
            L+GVVFQPFEE+K E            AR K+ D+CEAA+NEQINVEYN SY YH+L+AYFDRDN+AL+G                   MEYQN RG +V+L SI+ P +EFDH EKGDALYAMELAL+LE L NEKL +L  VA + NDPQ+ +F +SEFL EQ EAINK   YV+QL+ VGK  G
Sbjct:   55 LSGVVFQPFEEIKGELALVPQSPDKSLARHKFVDDCEAALNEQINVEYNASYAYHSLFAYFDRDNVALKGFAKFFKESSDEEREHAEKLMEYQNKRGGRVRLQSIVTPLTEFDHPEKGDALYAMELALALEKLVNEKLHNLHGVATRCNDPQLTDFIESEFLEEQGEAINKISKYVAQLRRVGKGHG 241          
BLAST of DY305483 vs. ExPASy Swiss-Prot
Match: FRIS_LYMST (Soma ferritin OS=Lymnaea stagnalis PE=2 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 4.268e-24
Identity = 69/167 (41.32%), Postives = 92/167 (55.09%), Query Frame = 2
Query:  323 ARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGEKVKLHSIMQPPSEFDHAEKGDALYAMELALSLENLTNEKLLSLRSVADKNNDPQMENFFKSEFLGEQVEAINKNR*YVSQLKMVGKRPGALGLRLF 823
            ARQ Y  E EA IN QIN+E   SY Y ++  YFDRD++AL G                   M+YQN RG ++ L  I +P    D  E G  L AM++AL LE   N+ LL L  +   ++D QM +F +SEFL EQV++I +   Y++ LK VG  PG LG  +F
Sbjct:    6 ARQNYHAESEAGINRQINMELYASYSYQSMAYYFDRDDVALPGFHKFFKHQSEEEREHAEKLMKYQNKRGGRIVLQDIKKP----DRDEWGTGLEAMQVALQLEKSVNQSLLDLHKLCTSHDDAQMADFLESEFLEEQVKSIKELSDYITNLKRVG--PG-LGEYIF 165          
BLAST of DY305483 vs. ExPASy Swiss-Prot
Match: FRIH_ECHGR (Ferritin heavy chain OS=Echinococcus granulosus PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 5.575e-24
Identity = 70/166 (42.17%), Postives = 89/166 (53.61%), Query Frame = 2
Query:  326 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGEKVKLHSIMQPPSEFDHAEKGDALYAMELALSLENLTNEKLLSLRSVADKNNDPQMENFFKSEFLGEQVEAINKNR*YVSQLKMVGKRPGALGLRLF 823
            RQ + +ECE  IN QIN+E   SY+Y A+  +FDRD++AL G                   M YQ  RG ++    I +P +     E    L AME+AL +E   NE LL+LR VA+KNND Q   F + EFLGEQV  I K   YV+ LK  G  PG LG  +F
Sbjct:    5 RQNFHEECERGINRQINMELYASYLYLAMSQHFDRDDVALPGFREFFAKASEEEREHAIKLMRYQCGRGGRIVYQDIAKPQT----TEWASGLEAMEMALKIEREVNESLLALRGVANKNNDSQFCEFLEGEFLGEQVSDIKKLAGYVTNLKRCG--PG-LGEYIF 163          
The following BLAST results are available for this feature:
BLAST of DY305483 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
FRI4_ARATH1.007e-5753.72Ferritin-4, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI2_ARATH1.007e-5760.10Ferritin-2, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI2_SOYBN2.242e-5758.42Ferritin-2, chloroplastic OS=Glycine max PE=2 SV=1[more]
FRI1_TOBAC1.113e-5655.83Ferritin-1, chloroplastic OS=Nicotiana tabacum GN=... [more]
FRI3_ARATH4.229e-5658.50Ferritin-3, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI1_PEA5.523e-5657.22Ferritin-1, chloroplastic OS=Pisum sativum PE=1 SV... [more]
FRI2_MAIZE7.465e-5354.68Ferritin-2, chloroplastic OS=Zea mays GN=FER2 PE=1... [more]
FRI1_MAIZE3.705e-5257.22Ferritin-1, chloroplastic OS=Zea mays GN=FER1 PE=1... [more]
FRIS_LYMST4.268e-2441.32Soma ferritin OS=Lymnaea stagnalis PE=2 SV=2[more]
FRIH_ECHGR5.575e-2442.17Ferritin heavy chain OS=Echinococcus granulosus PE... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1AF07RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305483 ID=DY305483; Name=DY305483; organism=Citrus sinensis; type=EST; length=1264bp
GTTCTTCTTCATCAAATTCATTTGCTTTCTTCCTTCAATCTCCATTACGC
ACTTGCTTACAGCAATGGCATTGGCAGCTTCTTCATCCTCCTCTCTTGCA
GCGAAGCAACTGGCTGGTCTTACAACAGGCTCATCATGTTACTCCAAGTC
TAATGCTTCTCTTGTGAAATTGGGTGGTATTTTGCCAAGAACGAAGAGGA
GTCTGAAGGTTTCTGCTGCTGTGGACGCCAATAGCATGCCGCTGACCGGG
GTCGTGTTTCAGCCATTCGAAGAGGTCAAGAAAGAGGTTCTTGATGTTCC
TGTTTCCCCTCTGCTTTCACTAGCTCGCCAAAAGTACGAGGACGAGTGTG
AGGCCGCTATCAACGAGCAGATCAATGTGGAATATAATGTCTCATACGTG
TACCATGCCCTGTATGCGTACTTTGATCGGGATAATATTGCTCTGAGAGG
CCTTGCCAAATTTTTCAAGGAGTCCAGTGAAGAAGAAAGGGAACATGCTG
AGAAGTTTATGGAGTATCAGAACTTGCGCGGTGAAAAAGTAAAACTGCAC
TCCATAATGCAGCCCCCTTCGGAGTTTGATCATGCAGAGAAAGGGGATGC
CTTGTATGCAATGGAACTAGCATTGTCCCTGGAGAACCTAACAAACGAGA
AGCTTCTGAGCCTGCGCAGTGTGGCGGATAAAAACAATGATCCCCAAATG
GAAAATTTTTTCAAGAGTGAATTTTTGGGTGAGCAGGTTGAAGCAATTAA
CAAGAATCGCTAATATGTTTCTCAACTTAAGATGGTTGGGAAAAGGCCCG
GGGCTTTGGGCCTTCGTTTGTTTGGTTTCCCCCGAAGGGTGAAGTTCGAT
GATGAAAAACCAAAATAGGTACTTTTTCTTTGTGGTTTAACAAACTGTTA
TCGGGCAAAAGGTCATAAAAAAAACCCAACCACAGGAAGTTAAAAGGGCG
TTACAAAAAAAGACGAAAAAAGGAGTAAATCCCAAAAAGTCTAAATAGCG
AAAGGGTCGCGTTTTAATACAAAAAATGAAGGGGGTGGATTAAAAAAAGA
CCATTTAGGGGGCAGCTAAATAAAGAACAGAGAGAAAAAGAAGAGGAGAA
GGGGGATTAAGGGGAGTAAGAAAAGAAACAATTTAAGAATGGTGATAGAA
AATGGAGAAATAAAAAAGTGTGTTTCTGAGCTTAGCGGAAACGGAATGGT
ATGTAGGGGGTAGGCACCTGAGTGGGAGAAAATGAAAGGAGAATTACAAT
TAGAGAGATATACT
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