DY305483

Overview
NameDY305483
Unique NameDY305483
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1264
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305483 vs. ExPASy Swiss-Prot
Match: FRIH3_XENLA (Ferritin heavy chain, oocyte isoform OS=Xenopus laevis PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 4.884e-20
Identity = 55/166 (33.13%), Postives = 89/166 (53.61%), Query Frame = 2
Query:  326 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGEKVKLHSIMQPPSEFDHAEKGDALYAMELALSLENLTNEKLLSLRSVADKNNDPQMENFFKSEFLGEQVEAINKNR*YVSQLKMVGKRPGALGLRLF 823
            RQ +  ECEAAIN Q+N+E   SYVY ++  YFDRD++AL+                    M+ QN RG ++ L  I +P    +  E  + L A+E +L LE   N+ +L L  ++  +NDP + +F +S +L EQV+++ +   +++ L+ +G     L   LF
Sbjct:    6 RQNFHQECEAAINRQVNMELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKMQNQRGGRLFLQDIKKP----ERDEWANGLEALECSLQLEKNVNQSILELHKLSTDHNDPHLCDFLESHYLDEQVKSMKELGDHITNLRRMGAPSNGLAEYLF 167          
BLAST of DY305483 vs. ExPASy Swiss-Prot
Match: FRIH1_SCHMA (Ferritin-1 heavy chain OS=Schistosoma mansoni GN=SCM-1 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 4.884e-20
Identity = 55/159 (34.59%), Postives = 83/159 (52.20%), Query Frame = 2
Query:  326 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGEKVKLHSIMQPPSEFDHAEKGDALYAMELALSLENLTNEKLLSLRSVADKNNDPQMENFFKSEFLGEQVEAINKNR*YVSQLKMVGKRPG 802
            RQ Y +ECEA +N+QIN+E   SYVY  +  +F+RD++AL G                   M YQN+RG ++ L  I  PP           L+AM+ AL LE   N+ L+ L +V +++ D    +F  +E+L  QV+++ K   Y++ L  VG   G
Sbjct:    5 RQNYHEECEAGVNKQINMELYASYVYMTMAFHFNRDDVALNGFYKFFLNESEEERQHAIKLMTYQNMRGGRIVLQDISAPP----QLSWNSGLHAMQDALDLEKKVNQSLMELVAVGERHRDTHFCDFINNEYLEIQVQSMKKLSDYITNLIRVGNGLG 159          
BLAST of DY305483 vs. ExPASy Swiss-Prot
Match: FRIH_RAT (Ferritin heavy chain OS=Rattus norvegicus GN=Fth1 PE=1 SV=3)

HSP 1 Score: 98.9821 bits (245), Expect = 6.378e-20
Identity = 58/166 (34.94%), Postives = 85/166 (51.20%), Query Frame = 2
Query:  326 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGEKVKLHSIMQPPSEFDHAEKGDALYAMELALSLENLTNEKLLSLRSVADKNNDPQMENFFKSEFLGEQVEAINKNR*YVSQLKMVGKRPGALGLRLF 823
            RQ Y  + EAAIN QIN+E   SYVY ++  YFDRD++AL+                    M+ QN RG ++ L  I +P    D  +    L AM  AL LE   N+ LL L  +A   NDP + +F ++ +L EQV++I +   +V+ L+ +G     +   LF
Sbjct:   10 RQNYHQDSEAAINRQINLELYASYVYLSMSCYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DRDDWESGLNAMRCALHLEKSVNQSLLELHKLATDKNDPHLCDFIETHYLNEQVKSIKELGDHVTNLRKMGAPESGMAEYLF 171          
BLAST of DY305483 vs. ExPASy Swiss-Prot
Match: FHL17_HUMAN (Ferritin heavy polypeptide-like 17 OS=Homo sapiens GN=FTHL17 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.856e-19
Identity = 62/166 (37.35%), Postives = 84/166 (50.60%), Query Frame = 2
Query:  326 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGEKVKLHSIMQPPSEFDHAEKGDALYAMELALSLENLTNEKLLSLRSVADKNNDPQMENFFKSEFLGEQVEAINKNR*YVSQLKMVGKRPGALGLRLF 823
            RQKY+  C+AAIN  I +E   SY+Y ++  YF+RD++AL                     M  QNLRG  + LH I +P  E    E G  L AME A  LE   N+ LL L  +A +  DPQ+ +F +S +L EQV+ I +   YVS L+ +      L   LF
Sbjct:   10 RQKYDTNCDAAINSHITLELYTSYLYLSMAFYFNRDDVALENFFRYFLRLSDDKMEHAQKLMRLQNLRGGHICLHDIRKP--ECQGWESG--LVAMESAFHLEKNVNQSLLDLYQLAVEKGDPQLCHFLESHYLHEQVKTIKELGGYVSNLRKICSPEAGLAEYLF 171          
BLAST of DY305483 vs. ExPASy Swiss-Prot
Match: FRI3_RANCA (Ferritin, lower subunit OS=Rana catesbeiana PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 2.424e-19
Identity = 53/160 (33.12%), Postives = 87/160 (54.37%), Query Frame = 2
Query:  326 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGEKVKLHSIMQPPSEFDHAEKGDALYAMELALSLENLTNEKLLSLRSVADKNNDPQMENFFKSEFLGEQVEAINKNR*YVSQLKMV-GKRPG 802
            RQ +  +CEA +N  +N++++ SYVY ++ +YF+RD++AL                     +EYQN RG +V L S+ +P    +  +  + L A++ AL L+   N+ LL L +VA   +DP M +F +S +L E VE I K   +++ LK +    PG
Sbjct:    6 RQNFHQDCEAGLNRTVNLKFHSSYVYLSMASYFNRDDVALSNFAKFFRERSEEEKEHAEKLIEYQNQRGGRVFLQSVEKP----ERDDWANGLEALQTALKLQKSVNQALLDLHAVAADKSDPHMTDFLESPYLSESVETIKKLGDHITSLKKLWSSHPG 161          
BLAST of DY305483 vs. ExPASy Swiss-Prot
Match: FRIM_SALSA (Ferritin, middle subunit OS=Salmo salar PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 5.399e-19
Identity = 54/151 (35.76%), Postives = 78/151 (51.66%), Query Frame = 2
Query:  326 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGEKVKLHSIMQPPSEFDHAEKGDALYAMELALSLENLTNEKLLSLRSVADKNNDPQMENFFKSEFLGEQVEAINKNR*YVSQL 778
            RQ Y  +CE AIN  IN+E   SY Y ++  YF RD++AL G                   + +QN RG ++ L  I +P  +    E G+ L AM+ AL LE   N+ LL L  +A    DP + +F ++ +L EQVEAI K   +++ L
Sbjct:    6 RQNYHHDCERAINRMINMEMFASYTYTSMAFYFSRDDVALPGFAHFFKENSEEEREHADKLLSFQNKRGGRILLQDIKKPERD----EWGNGLEAMQCALQLEKNVNQALLDLHKIASDKVDPHLCDFLETHYLNEQVEAIKKLGDHITNL 152          
BLAST of DY305483 vs. ExPASy Swiss-Prot
Match: FRIL_XENLA (Ferritin light chain, oocyte isoform OS=Xenopus laevis PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 5.399e-19
Identity = 55/166 (33.13%), Postives = 87/166 (52.41%), Query Frame = 2
Query:  326 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGEKVKLHSIMQPPSEFDHAEKGDALYAMELALSLENLTNEKLLSLRSVADKNNDPQMENFFKSEFLGEQVEAINKNR*YVSQLKMVGKRPGALGLRLF 823
            RQ Y +E EA +N   N+E   SY+Y ++  YFDRD++AL                     +++QN RG +V L  + +P    D  E G+   AME+AL+LE   N+ +L L  +A  + DP M+++ + EFL E+V+ I K   +++ L+ V      +G  LF
Sbjct:    8 RQNYHEESEAGVNRIANLELQASYLYLSVGYYFDRDDVALSKFSKFFRELSEKKRDHAEDFLKFQNKRGGRVVLQDVKKP----DDDEWGNGTKAMEVALNLEKSINQAVLDLHKIATDHTDPHMQDYLEHEFLEEEVKLIKKLGDHLTNLRRVKAAEEGMGEYLF 169          
BLAST of DY305483 vs. ExPASy Swiss-Prot
Match: FTMT_HUMAN (Ferritin, mitochondrial OS=Homo sapiens GN=FTMT PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.203e-18
Identity = 60/166 (36.14%), Postives = 85/166 (51.20%), Query Frame = 2
Query:  326 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGEKVKLHSIMQPPSEFDHAEKGDALYAMELALSLENLTNEKLLSLRSVADKNNDPQMENFFKSEFLGEQVEAINKNR*YVSQLKMVGKRPGALGLRLF 823
            RQ +  + EAAIN QIN+E   SYVY ++  YF RD++AL                     M  QN RG +++L  I +P  E D  E G  L+AME AL LE   N+ LL L ++A    DP + +F ++ +L EQV++I +   +V  L  +G     L   LF
Sbjct:   69 RQNFHPDSEAAINRQINLELYASYVYLSMAYYFSRDDVALNNFSRYFLHQSREETEHAEKLMRLQNQRGGRIRLQDIKKP--EQDDWESG--LHAMECALLLEKNVNQSLLELHALASDKGDPHLCDFLETYYLNEQVKSIKELGDHVHNLVKMGAPDAGLAEYLF 230          
BLAST of DY305483 vs. ExPASy Swiss-Prot
Match: FRIM_TRENE (Ferritin, middle subunit OS=Trematomus newnesi PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.052e-18
Identity = 52/151 (34.44%), Postives = 79/151 (52.32%), Query Frame = 2
Query:  326 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGEKVKLHSIMQPPSEFDHAEKGDALYAMELALSLENLTNEKLLSLRSVADKNNDPQMENFFKSEFLGEQVEAINKNR*YVSQL 778
            RQ Y  +CEAA+N  IN+E   SY Y ++  YF RD++AL G                   + +QN RG ++ L  I +P    +  E G  L A++ +L LE   N+ LL L  +A  + DP M +F ++ +L EQVE+I K   +++ L
Sbjct:    6 RQNYHRDCEAAVNRMINMELFASYSYTSMAFYFSRDDVALPGFAHFFKENSEEEREHADKLLTFQNSRGGRIFLQDIKKP----ERDEWGSGLDALQSSLQLEKNVNQALLDLHKIASDHTDPHMCDFLETHYLNEQVESIKKLGDFITNL 152          
BLAST of DY305483 vs. ExPASy Swiss-Prot
Match: FRIML_PAGBE (Ferritin, liver middle subunit OS=Pagothenia bernacchii PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.052e-18
Identity = 52/151 (34.44%), Postives = 79/151 (52.32%), Query Frame = 2
Query:  326 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGEKVKLHSIMQPPSEFDHAEKGDALYAMELALSLENLTNEKLLSLRSVADKNNDPQMENFFKSEFLGEQVEAINKNR*YVSQL 778
            RQ Y  +CEAA+N  IN+E   SY Y ++  YF RD++AL G                   + +QN RG ++ L  I +P    +  E G  L A++ +L LE   N+ LL L  +A  + DP M +F ++ +L EQVE+I K   +++ L
Sbjct:    6 RQNYHRDCEAAVNRMINMELFASYSYTSMAFYFSRDDVALPGFAHFFKENSDEEREHADKLLTFQNSRGGRIFLQDIKKP----ERDEWGSGLDALQSSLQLEKNVNQALLDLHKIASDHTDPHMCDFLETHYLNEQVESIKKLGDFITNL 152          
The following BLAST results are available for this feature:
BLAST of DY305483 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
FRIH3_XENLA4.884e-2033.13Ferritin heavy chain, oocyte isoform OS=Xenopus la... [more]
FRIH1_SCHMA4.884e-2034.59Ferritin-1 heavy chain OS=Schistosoma mansoni GN=S... [more]
FRIH_RAT6.378e-2034.94Ferritin heavy chain OS=Rattus norvegicus GN=Fth1 ... [more]
FHL17_HUMAN1.856e-1937.35Ferritin heavy polypeptide-like 17 OS=Homo sapiens... [more]
FRI3_RANCA2.424e-1933.13Ferritin, lower subunit OS=Rana catesbeiana PE=1 S... [more]
FRIM_SALSA5.399e-1935.76Ferritin, middle subunit OS=Salmo salar PE=2 SV=1[more]
FRIL_XENLA5.399e-1933.13Ferritin light chain, oocyte isoform OS=Xenopus la... [more]
FTMT_HUMAN1.203e-1836.14Ferritin, mitochondrial OS=Homo sapiens GN=FTMT PE... [more]
FRIM_TRENE2.052e-1834.44Ferritin, middle subunit OS=Trematomus newnesi PE=... [more]
FRIML_PAGBE2.052e-1834.44Ferritin, liver middle subunit OS=Pagothenia berna... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1AF07RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305483 ID=DY305483; Name=DY305483; organism=Citrus sinensis; type=EST; length=1264bp
GTTCTTCTTCATCAAATTCATTTGCTTTCTTCCTTCAATCTCCATTACGC
ACTTGCTTACAGCAATGGCATTGGCAGCTTCTTCATCCTCCTCTCTTGCA
GCGAAGCAACTGGCTGGTCTTACAACAGGCTCATCATGTTACTCCAAGTC
TAATGCTTCTCTTGTGAAATTGGGTGGTATTTTGCCAAGAACGAAGAGGA
GTCTGAAGGTTTCTGCTGCTGTGGACGCCAATAGCATGCCGCTGACCGGG
GTCGTGTTTCAGCCATTCGAAGAGGTCAAGAAAGAGGTTCTTGATGTTCC
TGTTTCCCCTCTGCTTTCACTAGCTCGCCAAAAGTACGAGGACGAGTGTG
AGGCCGCTATCAACGAGCAGATCAATGTGGAATATAATGTCTCATACGTG
TACCATGCCCTGTATGCGTACTTTGATCGGGATAATATTGCTCTGAGAGG
CCTTGCCAAATTTTTCAAGGAGTCCAGTGAAGAAGAAAGGGAACATGCTG
AGAAGTTTATGGAGTATCAGAACTTGCGCGGTGAAAAAGTAAAACTGCAC
TCCATAATGCAGCCCCCTTCGGAGTTTGATCATGCAGAGAAAGGGGATGC
CTTGTATGCAATGGAACTAGCATTGTCCCTGGAGAACCTAACAAACGAGA
AGCTTCTGAGCCTGCGCAGTGTGGCGGATAAAAACAATGATCCCCAAATG
GAAAATTTTTTCAAGAGTGAATTTTTGGGTGAGCAGGTTGAAGCAATTAA
CAAGAATCGCTAATATGTTTCTCAACTTAAGATGGTTGGGAAAAGGCCCG
GGGCTTTGGGCCTTCGTTTGTTTGGTTTCCCCCGAAGGGTGAAGTTCGAT
GATGAAAAACCAAAATAGGTACTTTTTCTTTGTGGTTTAACAAACTGTTA
TCGGGCAAAAGGTCATAAAAAAAACCCAACCACAGGAAGTTAAAAGGGCG
TTACAAAAAAAGACGAAAAAAGGAGTAAATCCCAAAAAGTCTAAATAGCG
AAAGGGTCGCGTTTTAATACAAAAAATGAAGGGGGTGGATTAAAAAAAGA
CCATTTAGGGGGCAGCTAAATAAAGAACAGAGAGAAAAAGAAGAGGAGAA
GGGGGATTAAGGGGAGTAAGAAAAGAAACAATTTAAGAATGGTGATAGAA
AATGGAGAAATAAAAAAGTGTGTTTCTGAGCTTAGCGGAAACGGAATGGT
ATGTAGGGGGTAGGCACCTGAGTGGGAGAAAATGAAAGGAGAATTACAAT
TAGAGAGATATACT
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