DY305483

Overview
NameDY305483
Unique NameDY305483
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1264
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305483 vs. ExPASy Swiss-Prot
Match: FRIH_RABIT (Ferritin heavy chain (Fragment) OS=Oryctolagus cuniculus GN=FTH1 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 3.500e-18
Identity = 57/156 (36.54%), Postives = 83/156 (53.21%), Query Frame = 2
Query:  356 AINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGEKVKLHSIMQPPSEFDHAEKGDALYAMELALSLENLTNEKLLSLRSVADKNNDPQMENFFKSEFLGEQVEAINKNR*YVSQLKMVGKRPGALGLRLF 823
            AIN QIN+E   SYVY ++  YFDRD++AL+                    M+ QN RG ++ L  I +P  E+D  E G  L AME AL LE   N+ LL L  +A   NDP + +F ++ +L EQV++I +   +V+ L+ +G     +   LF
Sbjct:    1 AINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP--EYDDWESG--LNAMECALHLEKSVNQSLLELHKLATDKNDPHLCDFIETHYLNEQVKSIKELGDHVTNLRKMGAPESGMAEYLF 152          
BLAST of DY305483 vs. ExPASy Swiss-Prot
Match: FRIMS_PAGBE (Ferritin, spleen middle subunit OS=Pagothenia bernacchii PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 5.970e-18
Identity = 52/151 (34.44%), Postives = 78/151 (51.66%), Query Frame = 2
Query:  326 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGEKVKLHSIMQPPSEFDHAEKGDALYAMELALSLENLTNEKLLSLRSVADKNNDPQMENFFKSEFLGEQVEAINKNR*YVSQL 778
            RQ Y  +CEAA+N  IN+E   SY Y ++  YF RD++AL G                   + +QN RG ++ L  I +P    +  E G+ +  M+ AL LE   N+ LL L  +A    DP M +F ++ +L EQVE+I K   +++ L
Sbjct:    6 RQNYHRDCEAAVNRMINMELFASYSYTSMAFYFSRDDVALPGFAHFFKENSDEEREHADKLLTFQNSRGGRIFLQDIKKP----ERDEWGNGVDVMQCALQLEKNVNQALLDLHKIASGKVDPHMCDFLETHYLNEQVESIKKLGDFITNL 152          
BLAST of DY305483 vs. ExPASy Swiss-Prot
Match: FRIH_PIG (Ferritin heavy chain OS=Sus scrofa GN=FTH1 PE=1 SV=3)

HSP 1 Score: 92.4337 bits (228), Expect = 5.970e-18
Identity = 57/155 (36.77%), Postives = 82/155 (52.90%), Query Frame = 2
Query:  326 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGEKVKLHSIMQPPSEFDHAEKGDALYAMELALSLENLTNEKLLSLRSVADKNNDPQMENFFKSEFLGEQVEAINKNR*YVSQLKMVG 790
            RQ Y  + EAAIN QIN+E   SYVY ++  YFDRD++AL+                    M+ Q  RG ++ L  IM+P  E D  E G  L AME AL +     + LL L  +A   NDP + +F ++ +L EQV+AI +   +++ L  +G
Sbjct:   10 RQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHGGRGHAEKLMKLQTQRGARIFLQDIMKP--ERDDWENG--LTAMEFALHVVKNVYQSLLELHKLATDKNDPHLCDFIETHYLHEQVKAIKELGDHITNLHRMG 160          
BLAST of DY305483 vs. ExPASy Swiss-Prot
Match: FRIL_RABIT (Ferritin light chain OS=Oryctolagus cuniculus GN=FTL PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 7.797e-18
Identity = 52/166 (31.33%), Postives = 84/166 (50.60%), Query Frame = 2
Query:  326 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGEKVKLHSIMQPPSEFDHAEKGDALYAMELALSLENLTNEKLLSLRSVADKNNDPQMENFFKSEFLGEQVEAINKNR*YVSQLKMVGKRPGALGLRLF 823
            RQ Y  E EAA+N  +N+    SY Y +L  YFDRD++AL G+                  ++ QN RG +     + +P  +    E G  L AME AL+LE   N+ LL L ++   + DP + +F ++ FL E+V+ + K   +++ ++ +     +LG  LF
Sbjct:    6 RQNYSPEVEAAVNHLVNLHLRASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREAAERLLKMQNQRGGRALFQDVQKPSQD----EWGKTLNAMEAALALEKNLNQALLDLHALGSAHTDPHLCDFLENHFLDEEVKLLKKMGDHLTNIRRLSGPQASLGEYLF 167          
BLAST of DY305483 vs. ExPASy Swiss-Prot
Match: FRIL_CANFA (Ferritin light chain OS=Canis familiaris GN=FTL PE=2 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 1.330e-17
Identity = 54/166 (32.53%), Postives = 81/166 (48.80%), Query Frame = 2
Query:  326 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGEKVKLHSIMQPPSEFDHAEKGDALYAMELALSLENLTNEKLLSLRSVADKNNDPQMENFFKSEFLGEQVEAINKNR*YVSQLKMVGKRPGALGLRLF 823
            RQ Y  E EAA+N  +N+    SY Y +L  YFDRD++AL G+                  ++ QN RG +     + +P  +    E G  L AME AL LE   N+ LL L ++     DP + +F ++ FL E+V+ I K   +++ L+ +      LG  LF
Sbjct:    6 RQNYSTEVEAAVNRLVNMHLRASYTYLSLGFYFDRDDVALEGVGHFFRELAEEKREGAERFLKMQNQRGGRALFQDVQKPSQD----EWGKTLDAMEAALLLEKSLNQALLDLHALGSARADPHLCDFLENHFLDEEVKLIKKMGDHLTNLRRLATPQAGLGEYLF 167          
BLAST of DY305483 vs. ExPASy Swiss-Prot
Match: FTMT_BOVIN (Ferritin, mitochondrial OS=Bos taurus GN=FTMT PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.963e-17
Identity = 57/166 (34.34%), Postives = 81/166 (48.80%), Query Frame = 2
Query:  326 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGEKVKLHSIMQPPSEFDHAEKGDALYAMELALSLENLTNEKLLSLRSVADKNNDPQMENFFKSEFLGEQVEAINKNR*YVSQLKMVGKRPGALGLRLF 823
            RQ +  + EAAIN QIN+E   SYVY ++  YF RD++AL                     M  QN RG  + L  I +P    D  +    L AME AL LE   N+ LL L ++A    DP + +F ++ +L EQV++I +   +V+ L  +G     L   LF
Sbjct:   69 RQNFHPDSEAAINRQINLELYASYVYLSMAYYFSRDDVALHNFARYFLRLSREEAEHAEKLMRLQNQRGGLICLQDIKKP----DQNDWKSGLNAMECALLLEKNVNQSLLELHTLASDKGDPHLCDFLETHYLNEQVKSIKELGDHVNNLVKMGAPESGLAEYLF 230          
BLAST of DY305483 vs. ExPASy Swiss-Prot
Match: FRIL1_RAT (Ferritin light chain 1 OS=Rattus norvegicus GN=Ftl1 PE=1 SV=3)

HSP 1 Score: 90.1225 bits (222), Expect = 2.963e-17
Identity = 53/164 (32.32%), Postives = 83/164 (50.61%), Query Frame = 2
Query:  326 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGEKVKLHSIMQPPSEFDHAEKGDALYAMELALSLENLTNEKLLSLRSVADKNNDPQMENFFKSEFLGEQVEAINKNR*YVSQLKMV-GKRPGALGL 814
            RQ Y  E EAA+N  +N+    SY Y +L  +FDRD++AL G+                  ++ QN RG +     + +P  +    E G  L AME AL+LE   N+ LL L ++     DP + +F +S FL ++V+ I K   +++ L+ V G +P   G+
Sbjct:    6 RQNYSTEVEAAVNRLVNLHLRASYTYLSLGFFFDRDDVALEGVGHFFRELAEEKREGAERLLKLQNERGGRALFQDVQKPSQD----EWGKTLEAMEAALALEKNLNQALLDLHALGSARTDPHLCDFLESHFLDKEVKLIKKMGNHLTNLRRVAGPQPAQTGV 165          
BLAST of DY305483 vs. ExPASy Swiss-Prot
Match: FTMT_MOUSE (Ferritin, mitochondrial OS=Mus musculus GN=Ftmt PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 5.054e-17
Identity = 59/166 (35.54%), Postives = 84/166 (50.60%), Query Frame = 2
Query:  326 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGEKVKLHSIMQPPSEFDHAEKGDALYAMELALSLENLTNEKLLSLRSVADKNNDPQMENFFKSEFLGEQVEAINKNR*YVSQLKMVGKRPGALGLRLF 823
            RQ +  + EAAIN QIN+E   SYVY ++  YF RD++AL                     M+ QN RG ++ L  I +P    D  E G  L AME AL LE   N+ LL L ++A +  DP + +F ++ +L EQV++I +   +V  L  +G     L   LF
Sbjct:   65 RQNFHPDSEAAINRQINLELYASYVYLSMAYYFSRDDVALYNFSKYFLRQSLEEREHAEKLMKLQNQRGGRICLQDIKKPDK--DDWECG--LRAMECALLLEKNVNQSLLDLHTLASEKGDPHLCDFLETHYLHEQVKSIKELGDHVHNLVTMGAPAAGLAEYLF 226          
BLAST of DY305483 vs. ExPASy Swiss-Prot
Match: FRIL_FELCA (Ferritin light chain OS=Felis catus GN=FTL PE=2 SV=3)

HSP 1 Score: 88.5817 bits (218), Expect = 8.620e-17
Identity = 54/166 (32.53%), Postives = 81/166 (48.80%), Query Frame = 2
Query:  326 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGEKVKLHSIMQPPSEFDHAEKGDALYAMELALSLENLTNEKLLSLRSVADKNNDPQMENFFKSEFLGEQVEAINKNR*YVSQLKMVGKRPGALGLRLF 823
            RQ Y  E EAA+N  +N+    SY Y +L  YFDRD++AL G+                  ++ QN RG +     + +P  +    E G  L AME AL LE   N+ LL L ++     DP + +F ++ FL E+V+ I K   +++ L+ +      LG  LF
Sbjct:    6 RQNYSTEVEAAVNRLVNMHLRASYTYLSLGFYFDRDDVALEGVGHFFRELAEEKREGAERLLKMQNQRGGRALFLDVQKPSQD----EWGKTLDAMEAALLLEKNLNQGLLDLHALGSARADPHLCDFLENHFLDEEVKLIKKMGDHLTNLRRLSGPQAELGEYLF 167          
BLAST of DY305483 vs. ExPASy Swiss-Prot
Match: FRIL_BOVIN (Ferritin light chain OS=Bos taurus GN=FTL PE=2 SV=3)

HSP 1 Score: 88.1965 bits (217), Expect = 1.126e-16
Identity = 53/166 (31.93%), Postives = 81/166 (48.80%), Query Frame = 2
Query:  326 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGEKVKLHSIMQPPSEFDHAEKGDALYAMELALSLENLTNEKLLSLRSVADKNNDPQMENFFKSEFLGEQVEAINKNR*YVSQLKMVGKRPGALGLRLF 823
            RQ Y  E EAA+N  +N++   SY Y +L  YFDRD++AL G+                  ++ QN RG +     + +P  +    E G    AME AL +E   N+ LL L  +A    DP + +F ++ FL E+V+ I K   +++ L+ +      LG  LF
Sbjct:    6 RQNYSTEVEAAVNRLVNMQLRASYTYLSLGFYFDRDDVALEGVGHFFRELAKEKREGAERLLKLQNQRGGRALFLDVQKPSQD----EWGKTQDAMEAALLVEKNLNQALLDLHGLASARGDPHICDFLENHFLDEEVKLIKKMGDHLTNLRRLAGPQAGLGEYLF 167          
The following BLAST results are available for this feature:
BLAST of DY305483 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
FRIH_RABIT3.500e-1836.54Ferritin heavy chain (Fragment) OS=Oryctolagus cun... [more]
FRIMS_PAGBE5.970e-1834.44Ferritin, spleen middle subunit OS=Pagothenia bern... [more]
FRIH_PIG5.970e-1836.77Ferritin heavy chain OS=Sus scrofa GN=FTH1 PE=1 SV... [more]
FRIL_RABIT7.797e-1831.33Ferritin light chain OS=Oryctolagus cuniculus GN=F... [more]
FRIL_CANFA1.330e-1732.53Ferritin light chain OS=Canis familiaris GN=FTL PE... [more]
FTMT_BOVIN2.963e-1734.34Ferritin, mitochondrial OS=Bos taurus GN=FTMT PE=2... [more]
FRIL1_RAT2.963e-1732.32Ferritin light chain 1 OS=Rattus norvegicus GN=Ftl... [more]
FTMT_MOUSE5.054e-1735.54Ferritin, mitochondrial OS=Mus musculus GN=Ftmt PE... [more]
FRIL_FELCA8.620e-1732.53Ferritin light chain OS=Felis catus GN=FTL PE=2 SV... [more]
FRIL_BOVIN1.126e-1631.93Ferritin light chain OS=Bos taurus GN=FTL PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1AF07RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305483 ID=DY305483; Name=DY305483; organism=Citrus sinensis; type=EST; length=1264bp
GTTCTTCTTCATCAAATTCATTTGCTTTCTTCCTTCAATCTCCATTACGC
ACTTGCTTACAGCAATGGCATTGGCAGCTTCTTCATCCTCCTCTCTTGCA
GCGAAGCAACTGGCTGGTCTTACAACAGGCTCATCATGTTACTCCAAGTC
TAATGCTTCTCTTGTGAAATTGGGTGGTATTTTGCCAAGAACGAAGAGGA
GTCTGAAGGTTTCTGCTGCTGTGGACGCCAATAGCATGCCGCTGACCGGG
GTCGTGTTTCAGCCATTCGAAGAGGTCAAGAAAGAGGTTCTTGATGTTCC
TGTTTCCCCTCTGCTTTCACTAGCTCGCCAAAAGTACGAGGACGAGTGTG
AGGCCGCTATCAACGAGCAGATCAATGTGGAATATAATGTCTCATACGTG
TACCATGCCCTGTATGCGTACTTTGATCGGGATAATATTGCTCTGAGAGG
CCTTGCCAAATTTTTCAAGGAGTCCAGTGAAGAAGAAAGGGAACATGCTG
AGAAGTTTATGGAGTATCAGAACTTGCGCGGTGAAAAAGTAAAACTGCAC
TCCATAATGCAGCCCCCTTCGGAGTTTGATCATGCAGAGAAAGGGGATGC
CTTGTATGCAATGGAACTAGCATTGTCCCTGGAGAACCTAACAAACGAGA
AGCTTCTGAGCCTGCGCAGTGTGGCGGATAAAAACAATGATCCCCAAATG
GAAAATTTTTTCAAGAGTGAATTTTTGGGTGAGCAGGTTGAAGCAATTAA
CAAGAATCGCTAATATGTTTCTCAACTTAAGATGGTTGGGAAAAGGCCCG
GGGCTTTGGGCCTTCGTTTGTTTGGTTTCCCCCGAAGGGTGAAGTTCGAT
GATGAAAAACCAAAATAGGTACTTTTTCTTTGTGGTTTAACAAACTGTTA
TCGGGCAAAAGGTCATAAAAAAAACCCAACCACAGGAAGTTAAAAGGGCG
TTACAAAAAAAGACGAAAAAAGGAGTAAATCCCAAAAAGTCTAAATAGCG
AAAGGGTCGCGTTTTAATACAAAAAATGAAGGGGGTGGATTAAAAAAAGA
CCATTTAGGGGGCAGCTAAATAAAGAACAGAGAGAAAAAGAAGAGGAGAA
GGGGGATTAAGGGGAGTAAGAAAAGAAACAATTTAAGAATGGTGATAGAA
AATGGAGAAATAAAAAAGTGTGTTTCTGAGCTTAGCGGAAACGGAATGGT
ATGTAGGGGGTAGGCACCTGAGTGGGAGAAAATGAAAGGAGAATTACAAT
TAGAGAGATATACT
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