DY305483

Overview
NameDY305483
Unique NameDY305483
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1264
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305483 vs. ExPASy Swiss-Prot
Match: FRIL1_MOUSE (Ferritin light chain 1 OS=Mus musculus GN=Ftl1 PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 1.126e-16
Identity = 51/163 (31.29%), Postives = 82/163 (50.31%), Query Frame = 2
Query:  326 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGEKVKLHSIMQPPSEFDHAEKGDALYAMELALSLENLTNEKLLSLRSVADKNNDPQMENFFKSEFLGEQVEAINKNR*YVSQLKMV-GKRPGALG 811
            RQ Y  E EAA+N  +N+    SY Y +L  +FDRD++AL G+                  +E+QN RG +     + +P  +    E G    AME AL++E   N+ LL L ++     DP + +F +S +L ++V+ I K   +++ L+ V G +P   G
Sbjct:    6 RQNYSTEVEAAVNRLVNLHLRASYTYLSLGFFFDRDDVALEGVGHFFRELAEEKREGAERLLEFQNDRGGRALFQDVQKPSQD----EWGKTQEAMEAALAMEKNLNQALLDLHALGSARTDPHLCDFLESHYLDKEVKLIKKMGNHLTNLRRVAGPQPAQTG 164          
BLAST of DY305483 vs. ExPASy Swiss-Prot
Match: FRIL_PONAB (Ferritin light chain OS=Pongo abelii GN=FTL PE=2 SV=3)

HSP 1 Score: 87.4261 bits (215), Expect = 1.920e-16
Identity = 52/166 (31.33%), Postives = 82/166 (49.40%), Query Frame = 2
Query:  326 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGEKVKLHSIMQPPSEFDHAEKGDALYAMELALSLENLTNEKLLSLRSVADKNNDPQMENFFKSEFLGEQVEAINKNR*YVSQLKMVGKRPGALGLRLF 823
            RQ Y  + EAA+N  +N+    SY Y +L  YFDRD++AL G+                  ++ QN RG +     I +P  +    E G    AM+ A++LE   N+ LL L ++   + DP + +F ++ FL E+V+ I K   +++ L  +G     LG  LF
Sbjct:    6 RQNYSTDVEAAVNSLVNMYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREGYERLLKMQNQRGGRALFQDIKKPAED----EWGKTPDAMKAAMALEKKLNQALLDLHALGSAHTDPHLCDFLETHFLDEEVKLIKKMGDHLTNLHRLGGPEAGLGEYLF 167          
BLAST of DY305483 vs. ExPASy Swiss-Prot
Match: FRIL_HORSE (Ferritin light chain OS=Equus caballus GN=FTL PE=1 SV=4)

HSP 1 Score: 87.4261 bits (215), Expect = 1.920e-16
Identity = 55/167 (32.93%), Postives = 85/167 (50.90%), Query Frame = 2
Query:  326 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGEKVKLHSIMQPPSEFDHAEKGDALYAMELALSLENLTNEKLLSLRSVADKNNDPQMENFFKSEFLGEQVEAINKNR*YVSQL-KMVGKRPGALGLRLF 823
            RQ Y  E EAA+N  +N+    SY Y +L  YFDRD++AL G+                  ++ QN RG +     + +P  +    E G  L AM+ A+ LE   N+ LL L ++     DP + +F +S FL E+V+ I K   +++ + ++VG + G LG  LF
Sbjct:    6 RQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRELAEEKREGAERLLKMQNQRGGRALFQDLQKPSQD----EWGTTLDAMKAAIVLEKSLNQALLDLHALGSAQADPHLCDFLESHFLDEEVKLIKKMGDHLTNIQRLVGSQAG-LGEYLF 167          
BLAST of DY305483 vs. ExPASy Swiss-Prot
Match: FRIL_HUMAN (Ferritin light chain OS=Homo sapiens GN=FTL PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 2.508e-16
Identity = 52/166 (31.33%), Postives = 81/166 (48.80%), Query Frame = 2
Query:  326 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGEKVKLHSIMQPPSEFDHAEKGDALYAMELALSLENLTNEKLLSLRSVADKNNDPQMENFFKSEFLGEQVEAINKNR*YVSQLKMVGKRPGALGLRLF 823
            RQ Y  + EAA+N  +N+    SY Y +L  YFDRD++AL G+                  ++ QN RG +     I +P  +    E G    AM+ A++LE   N+ LL L ++     DP + +F ++ FL E+V+ I K   +++ L  +G     LG  LF
Sbjct:    6 RQNYSTDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREGYERLLKMQNQRGGRALFQDIKKPAED----EWGKTPDAMKAAMALEKKLNQALLDLHALGSARTDPHLCDFLETHFLDEEVKLIKKMGDHLTNLHRLGGPEAGLGEYLF 167          
BLAST of DY305483 vs. ExPASy Swiss-Prot
Match: FRIL2_MOUSE (Ferritin light chain 2 OS=Mus musculus GN=Ftl2 PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 7.298e-16
Identity = 51/164 (31.10%), Postives = 82/164 (50.00%), Query Frame = 2
Query:  326 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGEKVKLHSIMQPPSEFDHAEKGDALYAMELALSLENLTNEKLLSLRSVADKNNDPQMENFFKSEFLGEQVEAINKNR*YVSQLKMV-GKRPGALGL 814
            RQ Y  E EAA+N  +N+    SY Y +L  +FDRD++AL G+                  ++ QN RG +     + +P  +    E G  L A++ AL LE   N+ LL L ++     DP + +F +S FL ++V+ I K   +++ L+ V G +P   G+
Sbjct:    6 RQNYSTEVEAAVNRLVNLHLRASYTYLSLGFFFDRDDVALEGVGHFFRELAEEKREGAERLLKLQNERGGRALFQDVQKPSQD----EWGKTLEAIQAALRLEKNLNQALLDLHALGSARTDPHLCDFLESHFLDKEVKLIKKMGNHLTNLRRVAGPQPVQTGV 165          
BLAST of DY305483 vs. ExPASy Swiss-Prot
Match: FHL17_MOUSE (Ferritin heavy polypeptide-like 17 OS=Mus musculus GN=Fthl17 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 6.830e-14
Identity = 46/155 (29.68%), Postives = 73/155 (47.10%), Query Frame = 2
Query:  326 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGEKVKLHSIMQPPSEFDHAEKGDALYAMELALSLENLTNEKLLSLRSVADKNNDPQMENFFKSEFLGEQVEAINKNR*YVSQLKMVG 790
            +Q Y+ +CE AIN  I +    SY Y ++  YFDRD++A                      M  QN RG  + L  I +P  +  H        AME A  +E L N+ LL++  VA +  DP + +F +   L +QV+ + +   Y++ L+ +G
Sbjct:    9 QQNYDWQCEDAINTHIQLCLYASYEYMSMAVYFDRDDVAQENFKRFFLTKSHNCQTSAEMFMHLQNKRGGCISLQDIARPERDSWHG----GFQAMECAFHMEMLINQSLLNMHEVAKEKGDPHLCHFLEQNCLDQQVDILKEMSGYLTNLRQMG 159          
The following BLAST results are available for this feature:
BLAST of DY305483 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
FRIL1_MOUSE1.126e-1631.29Ferritin light chain 1 OS=Mus musculus GN=Ftl1 PE=... [more]
FRIL_PONAB1.920e-1631.33Ferritin light chain OS=Pongo abelii GN=FTL PE=2 S... [more]
FRIL_HORSE1.920e-1632.93Ferritin light chain OS=Equus caballus GN=FTL PE=1... [more]
FRIL_HUMAN2.508e-1631.33Ferritin light chain OS=Homo sapiens GN=FTL PE=1 S... [more]
FRIL2_MOUSE7.298e-1631.10Ferritin light chain 2 OS=Mus musculus GN=Ftl2 PE=... [more]
FHL17_MOUSE6.830e-1429.68Ferritin heavy polypeptide-like 17 OS=Mus musculus... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1AF07RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305483 ID=DY305483; Name=DY305483; organism=Citrus sinensis; type=EST; length=1264bp
GTTCTTCTTCATCAAATTCATTTGCTTTCTTCCTTCAATCTCCATTACGC
ACTTGCTTACAGCAATGGCATTGGCAGCTTCTTCATCCTCCTCTCTTGCA
GCGAAGCAACTGGCTGGTCTTACAACAGGCTCATCATGTTACTCCAAGTC
TAATGCTTCTCTTGTGAAATTGGGTGGTATTTTGCCAAGAACGAAGAGGA
GTCTGAAGGTTTCTGCTGCTGTGGACGCCAATAGCATGCCGCTGACCGGG
GTCGTGTTTCAGCCATTCGAAGAGGTCAAGAAAGAGGTTCTTGATGTTCC
TGTTTCCCCTCTGCTTTCACTAGCTCGCCAAAAGTACGAGGACGAGTGTG
AGGCCGCTATCAACGAGCAGATCAATGTGGAATATAATGTCTCATACGTG
TACCATGCCCTGTATGCGTACTTTGATCGGGATAATATTGCTCTGAGAGG
CCTTGCCAAATTTTTCAAGGAGTCCAGTGAAGAAGAAAGGGAACATGCTG
AGAAGTTTATGGAGTATCAGAACTTGCGCGGTGAAAAAGTAAAACTGCAC
TCCATAATGCAGCCCCCTTCGGAGTTTGATCATGCAGAGAAAGGGGATGC
CTTGTATGCAATGGAACTAGCATTGTCCCTGGAGAACCTAACAAACGAGA
AGCTTCTGAGCCTGCGCAGTGTGGCGGATAAAAACAATGATCCCCAAATG
GAAAATTTTTTCAAGAGTGAATTTTTGGGTGAGCAGGTTGAAGCAATTAA
CAAGAATCGCTAATATGTTTCTCAACTTAAGATGGTTGGGAAAAGGCCCG
GGGCTTTGGGCCTTCGTTTGTTTGGTTTCCCCCGAAGGGTGAAGTTCGAT
GATGAAAAACCAAAATAGGTACTTTTTCTTTGTGGTTTAACAAACTGTTA
TCGGGCAAAAGGTCATAAAAAAAACCCAACCACAGGAAGTTAAAAGGGCG
TTACAAAAAAAGACGAAAAAAGGAGTAAATCCCAAAAAGTCTAAATAGCG
AAAGGGTCGCGTTTTAATACAAAAAATGAAGGGGGTGGATTAAAAAAAGA
CCATTTAGGGGGCAGCTAAATAAAGAACAGAGAGAAAAAGAAGAGGAGAA
GGGGGATTAAGGGGAGTAAGAAAAGAAACAATTTAAGAATGGTGATAGAA
AATGGAGAAATAAAAAAGTGTGTTTCTGAGCTTAGCGGAAACGGAATGGT
ATGTAGGGGGTAGGCACCTGAGTGGGAGAAAATGAAAGGAGAATTACAAT
TAGAGAGATATACT
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