EY702546

Overview
NameEY702546
Unique NameEY702546
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702546 vs. ExPASy Swiss-Prot
Match: ADF11_ARATH (Putative actin-depolymerizing factor 11 OS=Arabidopsis thaliana GN=ADF11 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.040e-30
Identity = 71/126 (56.35%), Postives = 90/126 (71.43%), Query Frame = 1
Query:  127 ELKAKRTYRFIVFKIEEKQKQVIVEKL------GEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFSAWAPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDLFKDRAN 486
            ELK +RT+R IV+KIE+   QVIVEK       GE  Q+YE+FA SLPA+ECRYA+ D +FV  E     +I F AW+P TA++R KMIY+S+KDRFKRELDGIQVE  ATD +++ LD  + R N
Sbjct:   13 ELKERRTFRSIVYKIEDNM-QVIVEKHHYKKMHGEREQSYEEFANSLPADECRYAILDIEFVPGER----KICFIAWSPSTAKMRKKMIYSSTKDRFKRELDGIQVEFHATDLTDISLDAIRRRIN 133          

HSP 2 Score: 21.557 bits (44), Expect = 5.040e-30
Identity = 7/9 (77.78%), Postives = 8/9 (88.89%), Query Frame = 3
Query:   90 MAVHDDCKL 116
            M +HDDCKL
Sbjct:    1 MVLHDDCKL 9          
BLAST of EY702546 vs. ExPASy Swiss-Prot
Match: ACTP_ACACA (Actophorin OS=Acanthamoeba castellanii PE=1 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.581e-26
Identity = 55/119 (46.22%), Postives = 82/119 (68.91%), Query Frame = 1
Query:  127 ELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFSAWAPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDLFKDRA 483
            ELK    +R++ FK+     +V+VE +G P  TYEDF + LP  +CRYA++DY+F   +  Q+++I F  WAPD+A ++SKM+Y S+KD  K++L GIQVE+QATD +E+  D   +RA
Sbjct:   16 ELKLGHQHRYVTFKMNASNTEVVVEHVGGPNATYEDFKSQLPERDCRYAIFDYEF-QVDGGQRNKITFILWAPDSAPIKSKMMYTSTKDSIKKKLVGIQVEVQATDAAEISEDAVSERA 133          
BLAST of EY702546 vs. ExPASy Swiss-Prot
Match: COFI_YARLI (Cofilin OS=Yarrowia lipolytica GN=COF1 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.061e-22
Identity = 52/121 (42.98%), Postives = 81/121 (66.94%), Query Frame = 1
Query:  127 ELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDF-VTAENCQKSRIFFSAWAPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDLFKDRAN 486
            ELK  +   FI++KI + + +++VE+ G  T +Y+ F   LP  +CRYAVYD+++ +++   ++S++ F  W+PDTA VRSKMIYASSKD  +R L GI  E+Q TD SE+  +   +R +
Sbjct:   28 ELKLGKKVTFIIYKINDAKTEIVVEEEGT-TDSYDTFLGKLPENDCRYAVYDFEYEISSGEGKRSKLVFFTWSPDTAPVRSKMIYASSKDSLRRALTGISTEIQGTDFSEVAYESVLERVS 147          
BLAST of EY702546 vs. ExPASy Swiss-Prot
Match: COFI_USTMA (Cofilin OS=Ustilago maydis GN=COF1 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.173e-21
Identity = 44/120 (36.67%), Postives = 79/120 (65.83%), Query Frame = 1
Query:  127 ELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFSAWAPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDLFKDRAN 486
            ELK  +  ++I++ + +K  +++V+     T +Y+DF A LP  ECRYA+YD+++   +  ++++I F +W+PD A+++ KM++ASSKD  ++ L GI  E+Q TD SE+  D   D+ +
Sbjct:   17 ELKLGKKIKYIIYSLNDKNTEIVVQNTSTST-SYDDFLAELPPTECRYAIYDFEYEKGDAGKRNKICFFSWSPDDAKIKPKMVFASSKDALRKALVGISTEIQGTDFSEVSYDTVLDKVS 135          
BLAST of EY702546 vs. ExPASy Swiss-Prot
Match: COFI_DEBHA (Cofilin OS=Debaryomyces hansenii GN=COF1 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.820e-21
Identity = 46/121 (38.02%), Postives = 80/121 (66.12%), Query Frame = 1
Query:  127 ELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDF-VTAENCQKSRIFFSAWAPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDLFKDRAN 486
            +LK  + Y+FI+F + +++ +++VE+    +  Y+ F   LP  EC+YA+YD+++ +     ++S+I F  W+PDTA ++SKMIYASSKD  +R L+G+  ++Q TD SE+  +   DR +
Sbjct:   18 DLKLGKKYKFIIFALNDQKTEIVVEETSNNSD-YDAFLEKLPENECKYAIYDFEYEIGGGEGKRSKIVFFTWSPDTAPIKSKMIYASSKDALRRALNGVSSDVQGTDFSEVAYESVLDRVS 137          
BLAST of EY702546 vs. ExPASy Swiss-Prot
Match: COFI_ZYGRO (Cofilin OS=Zygosaccharomyces rouxii GN=cof1 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.296e-20
Identity = 49/121 (40.50%), Postives = 77/121 (63.64%), Query Frame = 1
Query:  127 ELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAEN-CQKSRIFFSAWAPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDLFKDRAN 486
            +LK  + Y+F+++ I E  K  IV K    +Q+Y++F   LP  +C YA+YD+++    N  ++S+I F  W+PDTA VRSKM+YASSKD  +R L G+  ++Q TD SE+  +   +R +
Sbjct:   18 DLKLGKKYKFVLYGISE-DKTTIVVKETSTSQSYDEFLGKLPENDCLYAIYDFEYEIGGNEGKRSKIVFFTWSPDTAPVRSKMVYASSKDALRRALTGVSSDIQGTDFSEVSFETVLERVS 137          
BLAST of EY702546 vs. ExPASy Swiss-Prot
Match: COFI_YEAST (Cofilin OS=Saccharomyces cerevisiae GN=COF1 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.927e-20
Identity = 45/121 (37.19%), Postives = 78/121 (64.46%), Query Frame = 1
Query:  127 ELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDF-VTAENCQKSRIFFSAWAPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDLFKDRAN 486
            +LK  + Y+FI+F + + + +++V++      +Y+ F   LP  +C YA+YD+++ +     ++S+I F  W+PDTA VRSKM+YASSKD  +R L+G+  ++Q TD SE+  D   +R +
Sbjct:   18 DLKLGKKYKFILFGLNDAKTEIVVKETSTDP-SYDAFLEKLPENDCLYAIYDFEYEINGNEGKRSKIVFFTWSPDTAPVRSKMVYASSKDALRRALNGVSTDVQGTDFSEVSYDSVLERVS 137          
BLAST of EY702546 vs. ExPASy Swiss-Prot
Match: COFI_CANGA (Cofilin OS=Candida glabrata GN=COF1 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.927e-20
Identity = 45/121 (37.19%), Postives = 79/121 (65.29%), Query Frame = 1
Query:  127 ELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAEN-CQKSRIFFSAWAPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDLFKDRAN 486
            +LK    Y+F++F + + + +++V++      +Y+ F   LP  +C YAVYD+++  +E+  ++S+I F  W+PDTA VR KM+YASSKD  KR L+G+ +E+Q TD SE+  +   ++ +
Sbjct:   18 DLKLGMKYKFVLFSLNDAKTEIVVKETSSDP-SYDAFLEKLPENDCLYAVYDFEYQISESEGKRSKIVFFTWSPDTASVRPKMVYASSKDALKRALNGVAIEIQGTDFSEVSYEAVLEKVS 137          
BLAST of EY702546 vs. ExPASy Swiss-Prot
Match: COFI_SCHPO (Cofilin OS=Schizosaccharomyces pombe GN=cof1 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.404e-20
Identity = 44/113 (38.94%), Postives = 76/113 (67.26%), Query Frame = 1
Query:  127 ELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFSAWAPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLD 465
            ELK  ++ R++VFK+ + + +++VEK     + ++ F   LP ++CRYA+YD++F   E   +++I F +W+PD A ++SKM+Y+SSKD  +R   GI  ++QATD SE+  +
Sbjct:   18 ELKLGKSLRYVVFKMNDTKTEIVVEKKSTD-KDFDTFLGDLPEKDCRYAIYDFEFNLGEGV-RNKIIFISWSPDVAPIKSKMVYSSSKDTLRRAFTGIGTDIQATDFSEVAYE 128          
BLAST of EY702546 vs. ExPASy Swiss-Prot
Match: COFI_KLULA (Cofilin OS=Kluyveromyces lactis GN=COF1 PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.404e-20
Identity = 46/114 (40.35%), Postives = 75/114 (65.79%), Query Frame = 1
Query:  127 ELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAEN-CQKSRIFFSAWAPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLD 465
            +LK  + Y+FI++ + + + ++IV++     Q Y+ F   LP  +C YAVYD+++    N  ++S+I F  W+PDTA VRSKM+YASSKD  +R L+G+  ++Q TD SE+  +
Sbjct:   18 DLKLGKKYKFILYALNDSKTEIIVKETSAE-QDYDKFLEQLPENDCLYAVYDFEYELGNNEGKRSKIVFFTWSPDTAPVRSKMVYASSKDALRRALNGVSSDIQGTDFSEVAYE 130          
The following BLAST results are available for this feature:
BLAST of EY702546 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
ADF11_ARATH5.040e-3056.35Putative actin-depolymerizing factor 11 OS=Arabido... [more]
ACTP_ACACA1.581e-2646.22Actophorin OS=Acanthamoeba castellanii PE=1 SV=2[more]
COFI_YARLI1.061e-2242.98Cofilin OS=Yarrowia lipolytica GN=COF1 PE=3 SV=1[more]
COFI_USTMA1.173e-2136.67Cofilin OS=Ustilago maydis GN=COF1 PE=3 SV=1[more]
COFI_DEBHA5.820e-2138.02Cofilin OS=Debaryomyces hansenii GN=COF1 PE=3 SV=1[more]
COFI_ZYGRO1.296e-2040.50Cofilin OS=Zygosaccharomyces rouxii GN=cof1 PE=2 S... [more]
COFI_YEAST4.927e-2037.19Cofilin OS=Saccharomyces cerevisiae GN=COF1 PE=1 S... [more]
COFI_CANGA4.927e-2037.19Cofilin OS=Candida glabrata GN=COF1 PE=3 SV=1[more]
COFI_SCHPO8.404e-2038.94Cofilin OS=Schizosaccharomyces pombe GN=cof1 PE=1 ... [more]
COFI_KLULA8.404e-2040.35Cofilin OS=Kluyveromyces lactis GN=COF1 PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-009-C09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702546 ID=EY702546; Name=EY702546; organism=Citrus sinensis; type=EST; length=875bp
CAACAAACTTTCCTTCACCTTGCAAAATTTCTCTGTACTTTGCTTCTTAG
ATCTTGATCCTAGAAACCATGGCTAATGCTGCTTCTGGGATGGCTGTACA
TGATGACTGTAAGCTAGAGGGCGGGGGAGTTGAAAGCCAAGAGAACCTAC
CGCTTCATAGTATTTAAGATTGAGGAGAAGCAGAAGCAGGTCATTGTGGA
AAAACTTGGTGAGCCAACTCAAACCTATGAAGATTTTGCTGCCAGCCTTC
CTGCTGAGGAGTGCCGATATGCTGTGTATGATTATGATTTTGTTACCGCA
GAGAACTGCCAAAAAAGCAGGATTTTCTTCAGTGCATGGGCTCCCGACAC
TGCAAGAGTAAGAAGCAAGATGATTTATGCAAGCTCCAAGGACAGGTTCA
AGAGAGAGCTAGATGGCATTCAAGTGGAGCTGCAGGCAACTGATCCATCT
GAGATGGGTCTTGACCTATTTAAAGACCGTGCCAACTAAATAAAGGCTCC
TGATCTCAGCAATTGAGATTGGTTTTATCTTTTGTGCTTTACCTAAAGGT
GAAATGTTAATAGTTTGTGGCGGCAGCTTGAATCTAACTGAATTATGATA
TTGGTTTGGTGTTCAAGTTTCCCCGATGCAGTATTCTCCTCTAGAACCAT
TTCAGGGGCCTTTATGATGGCTCTATTGATTCTGCCGGGGCGTGCAACTT
ATCCGATGAGCGGCTACTTATACCCATTCCCCCAGCTCACGCGTTTCAAC
TGATGGGGGATGGAATACCCTCCTGGTAAGGGTGTTTTTACCTTAAAAAT
GGAGGTTCACTTTTGAACTTTATAAAGGAGGCTTCATTCTCCTCGCTAAA
AAAAAAAAAAAAAAAAGGCGCCCCC
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