DY305476
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_NOSP7 (Cytochrome c biogenesis protein ccsA OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=ccsA PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 1.278e-46 Identity = 105/284 (36.97%), Postives = 143/284 (50.35%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRL------------------------------------FLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 S+LYE +H I + + + +TAP A FAT ++M S LVPAL+ WLMMHVS+M+L Y L++T + I+L F + ++ + NG+ + + + + + S + R + + LD SYRII LGF LT GI++G VWANEAWGSYW+WDPKETWA ITW +F YLH R W+G AI+A+ GF+++WICY GVNLLG GLHSYG F Sbjct: 69 SNLYESLFFLTWGITTVHLIAESSSRSRLVGVVTAPVAMLIAAFATMTLPSQMQASEPLVPALKSNWLMMHVSVMMLSYSALMVGALLAIAFLIVTRGQNIQLQGSSVGTGGYRSNGYRLHKAAELISQPPAPSAENNGFARFESSSNGNGNANTAVLNLVTTSEPQTVASAEPLSPQRLSLAETLDNISYRIIGLGFPLLTIGIIAGGVWANEAWGSYWSWDPKETWALITWLVFAAYLHARITRGWQGRRPAILAATGFVVVWICYLGVNLLGKGLHSYGWF 352
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_CYAPA (Cytochrome c biogenesis protein ccsA OS=Cyanophora paradoxa GN=ccsA PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 1.278e-46 Identity = 106/238 (44.54%), Postives = 135/238 (56.72%), Query Frame = -1 Query: 81 IFDFKNNQNHLSAITAPSAFFTQ--GFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSARNYY-------RYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 767 +F +KNN + S T GF +M + LVPAL+ WLMMHVS+M++ Y L +R + L + N V++ S S N N LNS + Y ++ ++LD SYR+I+ GF LT GI++GAVWANEAWGSYW+WDPKETWA ITW IF IYLHTR W+G +A+VAS+GF IIWICY GVNLLG G+HSYG F Sbjct: 86 LFLYKNNMRIQLLDNSVSLLLTLLVGFLHFILPQEMREISPLVPALKSNWLMMHVSVMMISYATLMIGSLLSIIYLYFLYR--VDKLLNKINAVNLMTSNQNSNSLIYNLSFNTLLNSSKSMEYQILLKDLSLIKLSKRLDNLSYRLITFGFPLLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLIFAIYLHTRIIKGWQGKKAAMVASLGFFIIWICYLGVNLLGKGIHSYGWF 321
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_THEEB (Cytochrome c biogenesis protein ccsA OS=Thermosynechococcus elongatus (strain BP-1) GN=ccsA PE=3 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 6.345e-46 Identity = 104/254 (40.94%), Postives = 135/254 (53.15%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFS------EIQYMNEKKNVFLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 S+LYE +H + + + Q + +TAP A FA +M QS LVPAL+ WLMMHVS+M+L Y LV+T+ + + L K GSF E N V + R + + LD SYR+I LGF LT GI+SGAVWANEAWG+ W+WDPKETWA I W ++ YLH R W+G AI+A++GF ++W+CY GVNLLG GLHSYG F Sbjct: 69 SNLYESLFFLCWGLTAMHFVAESISGQPLVGVVTAPVAMGITAFAALSLPPEMQQSAPLVPALKSNWLMMHVSVMMLSYATLMVGSLLAIALLVVTWGQPVNL----KGSSVGTGSFRSRRPEPSLEASTGNGGTTVLTPPALQLSLQRLTLAETLDNLSYRMIGLGFPLLTIGIISGAVWANEAWGAPWSWDPKETWALIVWLVYAAYLHARMTRDWQGRKPAILATVGFGVVWVCYLGVNLLGKGLHSYGWF 318
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_ANASP (Cytochrome c biogenesis protein ccsA OS=Anabaena sp. (strain PCC 7120) GN=ccsA PE=3 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 6.345e-46 Identity = 112/282 (39.72%), Postives = 136/282 (48.23%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRL----------------FLKRKNFVHV-------NGSFCFSEIQYMNEKKNVFLN-----------SLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 S+LYE +H I + + + T P A FAT + M S LVPAL+ WLMMHVS+M+L Y LVIT I+L +K V N F E Q LN S + R + + LD SYRII LGF LT GI++GAVWANEAWGSYW+WDPKETWA ITW +F YLH R W+G AI+A+ GF+++WICY GVNLLG GLHSYG F Sbjct: 69 SNLYESLFFLSWGITTVHLIAENSSRSRLVGVFTTPVAMGIVAFATLTLPSDMQVSEPLVPALKSNWLMMHVSVMMLSYSALMVGSLLAIAFLVITRGNNIQLQGSSVGNGGYRTNGYRLMKAGELVSQPATPPVENNGFTRLESQNNGNSNTAVLNLATTPQTPTLTSTETLSPQRLSLAETLDNISYRIIGLGFPLLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLVFAAYLHARITRGWQGRRPAILAASGFVVVWICYLGVNLLGKGLHSYGWF 350
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_SYNP2 (Cytochrome c biogenesis protein ccsA OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=ccsA PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 8.287e-46 Identity = 105/273 (38.46%), Postives = 139/273 (50.92%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVF-------------------------LNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 S+LYE +H + ++ + + ITAP A FA +M S LVPAL+ WLMMHVS+M++ Y L++T + I L R + V NGS+ + Q ++ V L + A + + LD SYRII LGF LT GI++GAVWANEAWGSYW+WDPKETWA ITW +F YLH R W+G A +A+ GF ++W+CY GVN+LG GLHSYG F Sbjct: 69 SNLYESLFFLAWGVTTMHLVAEWMSRSRWVGVITAPVAMGITAFAALSLPAEMQNSAPLVPALKSNWLMMHVSVMMISYAALLVGSLLAIAFLIVTKGQKIEL---RGSSVG-NGSYRLRQPQNTTDETPVTVVAFQKTEPQSNGNTAVLASPDLQQLTTTPALSPQMLSLADTLDNISYRIIGLGFPLLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLVFAAYLHARITRGWQGRQPAFLAAAGFFVVWVCYLGVNILGKGLHSYGWF 337
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_CHLVU (Cytochrome c biogenesis protein ccsA OS=Chlorella vulgaris GN=ccsA PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 8.287e-46 Identity = 100/252 (39.68%), Postives = 137/252 (54.37%), Query Frame = -1 Query: 78 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHV---NGSFCFSEIQYMNEKKNVFLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSFN 824 S+LYE ++ + L +T+P+ F T++ QS LVPALQ WL+MHV++M+ Y LV++ + F+K FV + + + ++ EK+ + + +N + + LD SYR I +GF FLT GILSGA+WANE WG+YW+WDPKETWAFITW F YLH+R W G A+VAS GFL++W+CY GVNLLG GLHSYG N Sbjct: 71 SNLYESLIFLAWCLLLLYIYIEVSTKTLFLGVLTSPAILCLVAFTDFSLPTELQQSTPLVPALQSNWLVMHVTVMIASYAALLLGCFIAIAYLVLS-----KFFIKT-TFVTAPLSSQNTVLRQESFLEEKQKTDI--VFEKNDKNLKFLFFLDNLSYRTIGIGFCFLTLGILSGAIWANETWGNYWSWDPKETWAFITWLTFACYLHSRLVGGWTGSKPALVASFGFLVVWVCYLGVNLLGQGLHSYGFLN 314
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_SYNP6 (Cytochrome c biogenesis protein ccsA OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=ccsA PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.846e-45 Identity = 105/263 (39.92%), Postives = 144/263 (54.75%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSARNYYRYQVIQQ---------------LDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 S+LYE IH + + + + A T+P A FA +M Q+ LVPAL+ WLMMHVS+M++ Y LV+T + I L R + V G+ F +++ +N ++ + + + V++Q LD SYR+I LGF LT GI++GAVWANEAWGSYW+WDPKETWA ITW +F YLH R W+G AI+A++GF ++W+CY GVNLLG GLHSYG F Sbjct: 69 SNLYESLFFLAWGLTAIHLLAEKLSGSRLVGAATSPLALGIVAFAAFTLPKEMRQAEPLVPALKSNWLMMHVSVMMVSYAALLVGSLLSVAFLVVTRGQAIEL---RGSSV---GTGSFRQVK-LNRASDLTIATAESGGSGGTAVLEQPVLQLAPEQLSLADTLDNVSYRVIGLGFPLLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLVFAAYLHARITRGWQGRRPAILATVGFGVVWVCYLGVNLLGKGLHSYGWF 324
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_SYNE7 (Cytochrome c biogenesis protein ccsA OS=Synechococcus elongatus (strain PCC 7942) GN=ccsA PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.846e-45 Identity = 105/263 (39.92%), Postives = 144/263 (54.75%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSARNYYRYQVIQQ---------------LDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 S+LYE IH + + + + A T+P A FA +M Q+ LVPAL+ WLMMHVS+M++ Y LV+T + I L R + V G+ F +++ +N ++ + + + V++Q LD SYR+I LGF LT GI++GAVWANEAWGSYW+WDPKETWA ITW +F YLH R W+G AI+A++GF ++W+CY GVNLLG GLHSYG F Sbjct: 69 SNLYESLFFLAWGLTAIHLLAEKLSGSRLVGAATSPLALGIVAFAAFTLPKEMRQAEPLVPALKSNWLMMHVSVMMVSYAALLVGSLLSVAFLVVTRGQAIEL---RGSSV---GTGSFRQVK-LNRASDLTIATAESGGSGGTAVLEQPVLQLAPEQLSLADTLDNVSYRVIGLGFPLLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLVFAAYLHARITRGWQGRRPAILATVGFGVVWVCYLGVNLLGKGLHSYGWF 324
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_CYAP7 (Cytochrome c biogenesis protein ccsA OS=Cyanothece sp. (strain PCC 7424) GN=ccsA PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.846e-45 Identity = 103/259 (39.77%), Postives = 131/259 (50.58%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKR------KNFVHVNGSFCFSEIQYMNEKKNVFLNSL-----SARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 S+LYE H I + + + +T P A FA M S LVPAL+ WLMMHVS+M+L Y L +T + + L + V +N E LN+ + + R + LD SYRII LGF LT GI++GAVWANEAWGSYW+WDPKETWA ITW +F YLH R W+G AI+A+ GF+++W+CY GVNLLG GLHSYG F Sbjct: 69 SNLYESLFFLAWGVTAAHLIAQQMSRSHLVGVVTTPVAMGISAFAALTLPADMQTSAPLVPALKSNWLMMHVSVMMLSYATLMVGSALAIAFLFVTKGQNVELHGSSVGTGGYRTGVRLNKPQPVQETAIEGSGNVAVLNTTVVSDAPSLSLQRLSIADTLDNISYRIIGLGFPLLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLVFAAYLHARITKGWQGRKPAILAASGFVVVWVCYLGVNLLGKGLHSYGWF 327
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_CYAA5 (Cytochrome c biogenesis protein ccsA OS=Cyanothece sp. (strain ATCC 51142) GN=ccsA PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 2.411e-45 Identity = 105/266 (39.47%), Postives = 136/266 (51.13%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLF------------LKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSAR------NYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 S+LYE IH + + + + +T P A FA +M S LVPAL+ WLMMHVS+M+L Y LV+T + I L L R + + + Q L S++ + + R + LD SYRII LGF LT GI++GAVWANEAWGSYW+WDPKETWA ITW +F YLH R W+G AI+A+ GF+++W+CY GVNLLG GLHSYG F Sbjct: 69 SNLYESLFFLAWGVTAIHLVAEQMSRSALVGVVTTPVAMGITAFAALSLPPEMQTSAPLVPALKSNWLMMHVSVMMLSYATLMVGSVLAIAFLVVTRNRDIELKGSSVGTGGYRDKLGRSLLNNNHKQTTVNLTQSNGSGGTAILESVAVKPETVTLSPQRLNLADTLDNISYRIIGLGFPLLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLVFAAYLHARITKGWQGRKPAILAASGFVVVWVCYLGVNLLGKGLHSYGWF 334 The following BLAST results are available for this feature:
BLAST of DY305476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 141
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305476 ID=DY305476; Name=DY305476; organism=Citrus sinensis; type=EST; length=1202bpback to top |