DY305476

Overview
NameDY305476
Unique NameDY305476
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1202
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: NRFI_WOLSU (Protein nrfI OS=Wolinella succinogenes GN=nrfI PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.600e-15
Identity = 41/100 (41.00%), Postives = 57/100 (57.00%), Query Frame = -1 
Query:   90 IQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTR-TNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSY 386
            I QL + +   + LG   L  G   G +WANE+WG YW WDPKETW++I+  ++ + LH R    K      ++++  GF  I + YFGVN    GLHSY
Sbjct:  763 IHQLSQINEVSLILGLTLLVIGNFLGGIWANESWGRYWAWDPKETWSYISILLYALILHLRLLRPKHYDYLFSLLSLWGFGSILMTYFGVNFYLAGLHSY 862
The following BLAST results are available for this feature:
BLAST of DY305476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
NRFI_WOLSU2.600e-1541.00Protein nrfI OS=Wolinella succinogenes GN=nrfI PE=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1AE10RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305476 ID=DY305476; Name=DY305476; organism=Citrus sinensis; type=EST; length=1202bp
GCCAAGTTTCGTTTCGATCTCCGCGCTGTCCTATGTTTGTATTCATCAAA
CCCTTTCTTCAATTCAAATAGGTGTTAATTAAATGAACCATAACTATGTA
ACCCTATTCCTAATAGATTGACTCCGAAATAGCATATCCAAATTATAAGA
AAGCCCATAGAAGCCACAATTGCGGAATTTACACCTTCCCATTTTGTATT
TGTTCGAGTATGTAAATAAATCCCGAATATCGTCCAAGTAATAAATGCCC
AAGTTTCTTTTGGATCCCAATTCCAATAAGACCCCCACGCCTCATTAGCC
CATACTGCTCCCGAAAGAATACCTGTGGTTAAAAAGATAAATCCTAAACT
AATAATACGATAACTCCAACGATCCAATTGTTGAATCACTTGATACCTGT
AATAATTTCTAGCGGAAAGACTATTTAGAAAAACATTCTTTTTTTCGTTC
ATGTATTGGATTTCACTGAAACAAAATGACCCATTTACATGTACAAAATT
TTTTCTTTTCAAAAAAAGCCTTATCACTTTTCGAAATGTAATGACTAGAA
GAGCCGTGGATAATAATGATCCACATAAAAGAGCTGCATAGCCCAATACC
ATCATACTTACGTGCATCATTAACCACTGGACTTGGAGAGCGGGTACTAA
TATTCTGGATTGATGCATTTTGGTTAAAAAACCCGAAGTCGCAAAGCCTT
GGGTAAAAAAAGCACTTGGTGCCGTTATAGCGCTTAAATGATTTTGATTA
TTTTTAAAATCAAAAATCTTATGAATAATAGATAAACTCCATGAAAGAAA
GATTAATGATTCATATAAATCACTTNAATGGGAAATGTCTCGAGTAAACC
CNACGGGGTGATTAATAATCCTGTTAGACAGAAAGCGGTAGCTGTCATCC
CCCTTTCTGATGAAGCAATAGCCCTCTGAATCATCGAATAAAAGGGTATT
AAATAAATTGAAATTCCATTGAAACAAACGAAAAGATAAATGGCTTAATA
AACCTCCAAATTTAAAAAATAAAAAAAAAAAAAAAAAAAATCAAGGGGGG
GCCCGGGAACCCATTTCCCCTAAAAAGAGAGTTAATAAAATATACTGGGC
GGGTCTTTTAAAACACTCCTAACATGGGAAAAAACCCGGGTGTTATACCA
ATCTATATTTCCCCTTTTCAACCAAACCCCCCCTTTCTTTCCCCCTGCGG
GC
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