DY305476
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_OENBI (Cytochrome c biogenesis protein ccsA OS=Oenothera biennis GN=ccsA PE=3 SV=1) HSP 1 Score: 325.094 bits (832), Expect = 5.131e-88 Identity = 165/253 (65.22%), Postives = 188/253 (74.31%), Query Frame = -1 Query: 72 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSFN*H 824 S+LYE IH FK ++++ IT+ S FTQG TSG L++M QS ILVPALQ QWLMMHVSMMVLGY LVITFRK +R+F K+K F+ SF F EIQY NE NV L++ +S++NYYR Q+IQQLDRWS RIISLGFIFLT GILSGAVWANEAWGSYWNWDPKETWAFITWT+F IYLHTRTN ++ VNSAIVA +GF+IIWICYFGVNLLGIGLHSYGSFN H Sbjct: 69 SNLYESLLFLSWSFAIIHMFPYFKKQKSYVRTITSSSTIFTQGLVTSGLLSEMQQSEILVPALQSQWLMMHVSMMVLGYAALLCGSLLSVALLVITFRKALRIFSKKKAFL--KDSFSFVEIQYRNEPSNVLLSTSFISSKNYYRAQLIQQLDRWSSRIISLGFIFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTMFAIYLHTRTNPNFQSVNSAIVAFLGFIIIWICYFGVNLLGIGLHSYGSFNLH 319
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_PANGI (Cytochrome c biogenesis protein ccsA OS=Panax ginseng GN=ccsA PE=3 SV=1) HSP 1 Score: 324.709 bits (831), Expect = 6.701e-88 Identity = 166/249 (66.67%), Postives = 183/249 (73.49%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSL-SARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 SDLYE IH + FK + +LS ITA S FTQGFATSG LT++HQS ILVPALQ +WL+MHVSMM+L Y LVITFRK +F KR + N F F EIQYMNE+ NV + SA+NYYR Q+IQQLD WSYR+ISLGFIFLT GILSGAVWANEAWGSYWNWDPKETWAFITW +F IYLHTRTN K G NSAIVAS+GFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 69 SDLYESLIFLSWSLSVIHIVPYFKKKKKNLSTITASSVIFTQGFATSGLLTEIHQSAILVPALQSEWLIMHVSMMILSYAALLCGSLLSVALLVITFRKNRNIFCKRNPLL--NELFSFGEIQYMNERNNVLRTTFFSAKNYYRSQLIQQLDYWSYRVISLGFIFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWIVFAIYLHTRTNIKLRGANSAIVASIGFLIIWICYFGVNLLGIGLHSYGSF 315
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_OENGL (Cytochrome c biogenesis protein ccsA OS=Oenothera glazioviana GN=ccsA PE=3 SV=1) HSP 1 Score: 324.709 bits (831), Expect = 6.701e-88 Identity = 165/253 (65.22%), Postives = 187/253 (73.91%), Query Frame = -1 Query: 72 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSFN*H 824 S+LYE IH FK +++ IT+ S FTQG TSG L++M QS ILVPALQ QWLMMHVSMMVLGY LVITFRK +R+F K+K F+ SF F EIQY NE NV L++ +S++NYYR Q+IQQLDRWS RIISLGFIFLT GILSGAVWANEAWGSYWNWDPKETWAFITWT+F IYLHTRTN ++ VNSAIVA +GF+IIWICYFGVNLLGIGLHSYGSFN H Sbjct: 69 SNLYESLLFLSWSFAIIHMFPYFKKQNSYVRTITSSSTIFTQGLVTSGLLSEMQQSEILVPALQSQWLMMHVSMMVLGYAALLCGSLLSVALLVITFRKALRIFSKKKAFL--KDSFSFVEIQYRNEPSNVLLSTSFISSKNYYRAQLIQQLDRWSSRIISLGFIFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTMFAIYLHTRTNPNFQSVNSAIVAFLGFIIIWICYFGVNLLGIGLHSYGSFNLH 319
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_DRIGR (Cytochrome c biogenesis protein ccsA OS=Drimys granadensis GN=ccsA PE=3 SV=1) HSP 1 Score: 323.553 bits (828), Expect = 7.541e-88 Identity = 166/250 (66.40%), Postives = 189/250 (75.60%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSL--SARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 SDLYE IH + N++N LSAIT PSA FTQGFATS LT+MHQS ILVPALQ QWLMMHVSMM+L Y LVITFRK + +K N++ + G+F F EIQY+NEK++V N+ S RNY+RY++ Q+LD WSYR+ISLGFIF T GILSGAVWANEAWGSYWNWDPKETWAFITWTIF IYLHTRTN +GVNS+IVAS+GFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 69 SDLYESLMFLSWSFSIIHMVPKAGNHKNDLSAITGPSAIFTQGFATSDLLTEMHQSAILVPALQSQWLMMHVSMMLLSYAALLCGALLSVAFLVITFRKNTDIAVK-SNYLLI-GTFSFGEIQYLNEKRSVLQNTSFPSFRNYHRYRLTQRLDHWSYRVISLGFIFSTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHTRTNQSLQGVNSSIVASIGFLIIWICYFGVNLLGIGLHSYGSF 316 HSP 2 Score: 23.483 bits (49), Expect = 7.541e-88 Identity = 11/33 (33.33%), Postives = 15/33 (45.45%), Query Frame = -2 Query: 815 SSERGMTATAFCXXXXXXXXXXXLETFPIXVIY 913 SSE+G+ AT FC FP+ +Y Sbjct: 40 SSEKGIIATFFCITGLLITRWIYSRHFPLSDLY 72
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_CALFG (Cytochrome c biogenesis protein ccsA OS=Calycanthus floridus var. glaucus GN=ccsA PE=3 SV=1) HSP 1 Score: 320.857 bits (821), Expect = 1.674e-87 Identity = 167/252 (66.27%), Postives = 187/252 (74.21%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFL----NSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 SDLYE IH + F+N++N LSAITAPSA FTQGFATSG LT+MHQS ILVPALQ QWLMMHVSMM+LGY LVITFRK + + K +F+ GSF F EI+Y NEK+ + + S RNY+RYQ+ Q+LD SYRIISLGF F T GILSGAVWANEAWGSYWNWDPKETWAFITWTIF IYLHTRTN +++ V AIVASMGFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 69 SDLYESLMFLSWSFSIIHMVPYFRNHKNSLSAITAPSAIFTQGFATSGLLTEMHQSAILVPALQSQWLMMHVSMMLLGYASLLCGSLLSVALLVITFRKTLGIPGKNNHFLI--GSFPFGEIRYFNEKRKRSVLKKTSFFSFRNYHRYQLTQRLDHCSYRIISLGFTFSTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHTRTNQRFQDVGPAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 318 HSP 2 Score: 25.0238 bits (53), Expect = 1.674e-87 Identity = 12/33 (36.36%), Postives = 15/33 (45.45%), Query Frame = -2 Query: 815 SSERGMTATAFCXXXXXXXXXXXLETFPIXVIY 913 SSE+GM AT FC FP+ +Y Sbjct: 40 SSEKGMMATFFCITGLLVTRWIYSRHFPLSDLY 72
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_LOTJA (Cytochrome c biogenesis protein ccsA OS=Lotus japonicus GN=ccsA PE=3 SV=1) HSP 1 Score: 322.783 bits (826), Expect = 2.546e-87 Identity = 165/252 (65.48%), Postives = 185/252 (73.41%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQY--MNEKKNVFLNSL--SARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 SDLYE + + FK +N LS I APS FTQGFATSG LT+MHQS ILVPALQ WLMMHVSMM+LGY LVITF+++I + K K + SF ++EI+Y MNE+ NV + S RNYYRYQ IQQLDRW YRIISLGFIFLT GILSGAVWANEAWGSYWNWDPKETWAFITWTIF IYLH+R N K EG+NS+IVAS+GFLIIWICYFGVNLLGIGLH+YGSF Sbjct: 69 SDLYESLIFLSWGFSIFYMVPRFKKQKNDLSTIIAPSVIFTQGFATSGLLTEMHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQELIPILGKSKRLSFLYESFDYAEIKYINMNERNNVLRKTSFSSYRNYYRYQFIQQLDRWGYRIISLGFIFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSIVASIGFLIIWICYFGVNLLGIGLHNYGSF 320
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_OENAR (Cytochrome c biogenesis protein ccsA OS=Oenothera argillicola GN=ccsA PE=3 SV=1) HSP 1 Score: 321.627 bits (823), Expect = 5.673e-87 Identity = 163/253 (64.43%), Postives = 187/253 (73.91%), Query Frame = -1 Query: 72 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSFN*H 824 S+LYE IH K ++++ IT+ S FTQG TSG L++M QS ILVPALQ QWLMMHVSMMVLGY LVITFRK +++F K+K F+ SF F EIQY NE NV L++ +S++NYYR Q+IQQLDRWS RIISLGFIFLT GILSGAVWANEAWGSYWNWDPKETWAFITWT+F IYLHTRTN ++ VNSAIVA +GF+IIWICYFGVNLLGIGLHSYGSFN H Sbjct: 69 SNLYESLLFLSWSFAIIHMFPYLKKQKSYVRTITSSSTIFTQGLVTSGLLSEMQQSEILVPALQSQWLMMHVSMMVLGYAALLCGSLLSVALLVITFRKALKIFSKKKAFL--KDSFSFVEIQYRNEPSNVLLSTSFISSKNYYRAQLIQQLDRWSSRIISLGFIFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTMFAIYLHTRTNPNFQSVNSAIVAFLGFIIIWICYFGVNLLGIGLHSYGSFNLH 319
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_DAUCA (Cytochrome c biogenesis protein ccsA OS=Daucus carota GN=ccsA PE=3 SV=1) HSP 1 Score: 321.242 bits (822), Expect = 7.409e-87 Identity = 163/251 (64.94%), Postives = 184/251 (73.31%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFV-HVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 SDLYE IH + FK N++HLS ITA S FTQGFATSG LT++HQS ILVPALQ +WL+MHVSMM+LGY LV+TFRK L K+ + + F F EIQY+NE N+F N+ S NYYR Q+IQQLD WSYR+ISLGFIFLT GILSGAVWANEAWGSYWNWDPKETWAFITW +F +YLHTRTNT + NSAIVASMGFLIIWICYFGVNLLGIGLH+YGSF Sbjct: 69 SDLYESLIFLSWSLSFIHIVPYFKKNKSHLSTITASSVIFTQGFATSGLLTEIHQSAILVPALQSEWLIMHVSMMILGYAALLCGSLLSVALLVLTFRKNRNLLCKKNPLLLKLTEEFSFGEIQYINEINNIFGNASFFSDNNYYRSQLIQQLDYWSYRVISLGFIFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWIVFAVYLHTRTNTNLQVENSAIVASMGFLIIWICYFGVNLLGIGLHTYGSF 319
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_SOYBN (Cytochrome c biogenesis protein ccsA OS=Glycine max GN=ccsA PE=3 SV=1) HSP 1 Score: 320.857 bits (821), Expect = 9.676e-87 Identity = 162/253 (64.03%), Postives = 187/253 (73.91%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNH-LSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMN--EKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 SDLYE + + FK ++N+ L+ I PS FTQGFATSG LTKMH+S ILVPALQ WLMMHVSMM+LGY LVITF+++I++ K KNF +N SF F+EI+YMN +K NV + LS RNYYR Q +QQLDRW YR ISLGFIFLT GI+SGAVWANEAWGSYWNWDPKETWAFITWTIF IYLHTR N K E +NS+IVAS+GFLIIW+CY G+NLLGIGLHSYGSF Sbjct: 70 SDLYESLIFLSWTFSIFYMVPYFKKSKNYYLNTIITPSVIFTQGFATSGLLTKMHESLILVPALQSHWLMMHVSMMILGYATLLCGSLLSVAILVITFQELIQIIGKSKNFYFLNESFSFAEIKYMNMTDKNNVLQKTSFLSYRNYYRSQFLQQLDRWGYRTISLGFIFLTIGIISGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHTRKNKKLEDLNSSIVASIGFLIIWVCYLGINLLGIGLHSYGSF 322
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_CHLSC (Cytochrome c biogenesis protein ccsA OS=Chloranthus spicatus GN=ccsA PE=3 SV=1) HSP 1 Score: 319.316 bits (817), Expect = 1.403e-86 Identity = 164/252 (65.08%), Postives = 184/252 (73.02%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVF----LNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 SDLYE IH + +N+ N LS ITAPS FTQGF TSG LTKMHQS ILVPALQ +WLMMHVSMM+L Y LVITFRK I + L + N + + GSF F + QY+NEK+++ + LS RNY+RYQ+ +LD WSYR+ISLGF FLT GILSGAVWANEAWGSYWNWDPKETWAFITWTIF IY HTRTN +G NSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 68 SDLYESLIFLSWSFAIIHMVPKIRNHPNSLSTITAPSTIFTQGFTTSGLLTKMHQSTILVPALQSKWLMMHVSMMLLSYAALLCGSLLSIALLVITFRKNIDI-LGKSNHLFI-GSFSFGKTQYLNEKRSLLHLQKASFLSFRNYHRYQLTHRLDYWSYRVISLGFTFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYSHTRTNKSLQGANSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 317 HSP 2 Score: 23.483 bits (49), Expect = 1.403e-86 Identity = 18/63 (28.57%), Postives = 27/63 (42.86%), Query Frame = -2 Query: 815 IYLFVCFNGISIYL-IPFYSMIQRAIAS---SERGMTATAFCXXXXXXXXXXXLETFPIXVIY 991 I +CF+ I I + I +++ I SE+GM AT FC FP+ +Y Sbjct: 9 ILTHICFSIILIVITIHLITLLVHEIGLYNLSEKGMIATFFCITGLLVSRWIYSGHFPLSDLY 71 The following BLAST results are available for this feature:
BLAST of DY305476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 141
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305476 ID=DY305476; Name=DY305476; organism=Citrus sinensis; type=EST; length=1202bpback to top |